Array 1 93888-93483 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRFE01000024.1 Myxosarcina sp. GI1 contig_23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 93887 37 100.0 35 ..................................... TCCCATTGATAAACATAGGCTTCCATAGCCTCCTG 93815 37 100.0 37 ..................................... ATCTCTGAGTAGCCAACCGTTAGGCAAAGGGGCGTCG 93741 37 100.0 37 ..................................... TAGCCTACAAACGTTTGGGCATGGAAATGGATTTTAT 93667 37 100.0 37 ..................................... TAGCCTACAAACGTTTGGGCATGGAAATGGATTTTAT 93593 37 100.0 37 ..................................... CGTAATTCTTAGGAGTGGGTGCAAAATTTAACCCCAG 93519 37 81.1 0 .......T.....T...GT.....C.TG......... | ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 96.9 37 GTTTCAACGACCACTTTAAGATGGGTATGGTTGAAAG # Left flank : AAGAATTTTCAAGCACATAACTTCTGTACCTCGAAAATTAAATATAATTTTTAATAAATCAAATATAATTTTTAATAAATCGCGCCGTAGATCATGTTCTTTTAGAACCGCTGAACTATGTTAAATGTGGGTTAGTTTTACTGTCGGCAGGCAGAATGCTTTCTGTCCCTGGTAGCTGTCCGCCCTGATGCTGCCATCGAAAAGATGGGAATAAGGTGCGCCCCCAGCAATAAGTGGTGTAGACGTACTACAGCGATCGCTACCGAATCACCTCCGAGCAAGGAGGAGTCTATCCTCATTTTTTCTCTTTTTTGACGAACCCAAGCGTGGGCAAAATTCTTAGGGGGTTCGACAAAACTGCAAAAGTCAAGCCTGACAAGCTTTTGATACTTTTAACGAAGTGGTTTTTACTGTAATGCAACAAAAAATAGAGAATTCTTTCTTAGGTTTGTCAAAATTGACCCTGGAGATGAGTCTTAATAACTATTTCAGCTTACAGA # Right flank : ATAAAGGCTTAGTCATTGTTATTGATGAAGCGGAAGTGCCAACGACCACACGCAAATTTTAATTCTCAATAACTATCGTCTAATTCTCGCTAAGAAACTGAAAGTAATTTTAAAGTCTTGTTCTTTGGTTACTCCAAGTAATTTATTACTTTTAGGCGATCGCCTTGCTTGCCGAGTTTAATTTGTATCAGCAATTGCTGTATACAGTCTAAAACCAAGTAAATTCGATTAATTATTTTTTGTGCGACGCAGTAAGTCGCTTGATTTAAGTGAAAATTTCATGACTGAGGTTATGGATTTCTAGTAGATTTCATCCTACTATTCCCACGTAAAGGAGTCTCGTACTCTGGTCACATTGAAAGTAAATAATGAACTCAATGGAATGCAGACCATGAATGTATCCGAAGGTGGATAACCTCTATCCAGCTAGGGCTAGGGAAAAGTTGGAAGGGTTAATGTAAATGAATTGTCGATGAGGTTCCGTTAATTAAAGTGGGTGA # Questionable array : NO Score: 2.91 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACGACCACTTTAAGATGGGTATGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 69487-69671 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRFE01000004.1 Myxosarcina sp. GI1 contig_3, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 69487 37 100.0 37 ..................................... CGATCGCTATCCAGACGAGCAACTATGTTTGGAAGGT 69561 37 100.0 37 ..................................... AACCATACAAAACTACAACAAATAAAATGACTAAAAT 69635 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 3 37 100.0 38 GTTGCTTCGCCTCTCCCGCTATGGGAGATGTTGAAAG # Left flank : TAATCGTCAGGAGGCGTATTGCTGCCAATTTCCTTCCTCTAGGGATTGGGACAAAACCTATAATGTTGAATTGCTCGTTCTTTTCAATATTATAGGCTAAGGTGCGCTCTCAGCAAGTGAGTAAGCCGATGGATTGAGGAAATTTTCCAGAGGCTCAATTCTGACTTCAAAATTTAGGTTTTGCAATTCAGGATGCCAAGATATGGTTTTGTGGCTACCAAATCACCCCTTTTTGGGGAACTTTTTCCATACTCGCGCGTTCCTTAGCTGATGAAACATCAGCAGGGTCGCTCGTCTTTTTGTCGAAGCTAAGCGGGGGCAAAATCCCTGGGAGGTTCGACAAAAATCAGCAAATCCTTGTCTGTCATTCTTTCTAGCTTTTAACATTAATATTGAAACTCTAATATTAACGGTTATTTTGAATTTTTGAGAAGTATTTTTTATACCTTCAACAAAACTAGGATTACAGCTATCTTCAGACAAGGGTTTCAACGGGTAGA # Right flank : GATTTCTGTATTGGAAAAAGTTGAAAGGAGCAGAGGACTGAAAACTGTAAGGGTGTTTCAGTTAAGATAAATCGAATTAATTTTTGACATTAATTCTTTAAATCTGGTTTTTTGGGCAAAAATCTTTGCACTTTAAACCAATAAAAACATAAAAAAGGCTCAAACGCCTATAAAATCGTTCAAGCCATGCAGTTTTTTGACATTAATTCTTTAAATCTGACAAATAACTCTTTAATGTACAAAGGATGGCGGGAGGCGGATTTGAACCGCCGACACGAGGATTTTCAGTCCTCTGCTCTACCGACTGAGCTATCCTGCCAATTTTTGCTTGTGCTAGATTAATTTAGCAAAATTAAGACTCTTATGGCAAGTCCTAATCTTAAATTAATTTTTAATCGCTTTATTTTTGGACTTTGGACAAACAGCAAAATGATTCGCGATGGAAATTCGCTCATTTGGACTCGATATCTAGCTGACAATCTATAGTCAATTAGACCGCA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCTTCGCCTCTCCCGCTATGGGAGATGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.70,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //