Array 1 62376-61929 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJXR01000015.1 Enterobacter cloacae strain MDR0231, e1252, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 62375 28 100.0 32 ............................ GTCGGCCCCCTTGAACTTAAGGCCATCTTTAT 62315 28 100.0 32 ............................ AGTTCCAAGCATGGCTCACCGCGAAGCTCGCG 62255 28 100.0 32 ............................ AGCATTGCCGTATAACGTTGCTCAAGTTTCAT 62195 28 100.0 32 ............................ TGGATGGACGCGGGCAAGGGTGCGCTCACAGC 62135 28 96.4 32 A........................... TGTTTATGCAACGATGGATTTAAAGGGCAAAG 62075 28 100.0 32 ............................ CCCCAGGAAAGGAACAGCAGTCACCAGCGCTT 62015 28 92.9 30 ...........C...C............ ATAGAAAATAAGGTCTATCCCCCTTACTCT C [61990] 61956 28 71.4 0 C.......T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================ ================== 8 28 95.1 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GAACGAAACGGGCTACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTGCGTTCGTTAATCCCAGTGACGCGCAAAATGTCCGCTTTCGACATTGCCGTCCACTCATGAATGTTGTCGAGGACGCTGACGGGTAAGCCCTGATTGAGAAATTCAATCAGCCGCATACCTCTGTTTGCTGGTAAACCGGCGTACCGCCAAAGCGCGTTATCAGCAGGTTTCTGCGCGGGGATCCATGTTCTCATGTTACCTCCTGAGTCATGTCATTTGTCATAGTTAAGTATAGCCATTTGTCAGGGGGAGTGAAATGGTTGTTTTGTATGCAGAGGGGAAAGTGGGGCATTTGACCCTAATTTTTAGTGTATTTGTAATGTATTGATTTTAAATGGATAATTTTGATGGGTAAAAAAGAGGGTAAAAGAAGAGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGGGATTATTATTCCA # Right flank : CAGAAACAAAGCCCAAATAATTGTTCAAATAATCAACTACACCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACATTTTCTGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 72251-71863 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJXR01000015.1 Enterobacter cloacae strain MDR0231, e1252, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 72250 28 100.0 32 ............................ CAGCACATTCATCATTTGATCATGCGAGCCGG 72190 28 100.0 32 ............................ GCGCATCGAGCTGACGCGTTCGCGTAGGTTCG 72130 28 100.0 32 ............................ CGTAGCGGATAAGGGAATATAAATGCGTTTTT 72070 28 100.0 32 ............................ TGTGGGAATAGCGTCAGCGCCACTGGCGACGG 72010 28 100.0 32 ............................ AATAGCCTTGCATATTAGCAAGGCGGACGGCC 71950 28 100.0 32 ............................ TACGGTTACGCGGTCAGGTGTCTCAGTAGGTT 71890 28 78.6 0 ...........C.........AC.CCT. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 96.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGGGCCTGGCTGGAAGAGGTGAAATCCGGCCTCACAGAGTCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGATGAAGCGGAACAGCCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTACTGGTGTCGCATTTTGACCGTGATATGTTGCCGCACCTTACGGGGCTGCTGCATGACATTACGCATTCGATGGCCGCAGATGTCGTTGCACCTCAACGTGCAGAAACGGTAATTCACATTATTTCCTGAGTGCAATCCGAGGCGTCGGGGGTGTTCCTCTGACGCCATAGGTTTAAACCCTTTTTTCTGATATTTACATAAGTTATTGATTTATATGGTGAGAATTTACGTCCCAGAAAAAAGGGTTTTATGCGTAAAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : AAACCAACCCTCTAAAACATTCACCCTACCTATTTAAACCTTAATACCATCAAACCCACCCTCTCTATTTTTCACAATAAATAAAAAATTCATTCACGGACCAATTATATTCTAATGAATATATTATTCGTAAAAATAATGCATTAAATGAAAAAGTAATTTTTCGCTTTATTATCACGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTCCGATAACATACCGCGCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAACAGCATCACCCCTACAGACTTAAAAACCATTCTACATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGTCGCATCCAGGTAAATGGTGGGCGCGTTGAATATGTCACCCAGGAAGGCAAAGAGTCGTTTTACTGGAATATTCCCATCGCTAATACCACAGCGGTGATGCTGGGAATGGGAACATCCGTTACGCAAATGGCAATGCGGGAAT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 87642-87373 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJXR01000015.1 Enterobacter cloacae strain MDR0231, e1252, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 87641 28 100.0 32 ............................ AAAGCCGAAAATAAGCACCTGGCCCGTGTTGC 87581 28 100.0 32 ............................ AAATCGGGAAAGGTCGGAGAATTCCATCGTTT 87521 28 100.0 32 ............................ TGATCGCGCATCTGCAGCACCTGGTTGTCGAT 87461 28 96.4 32 ...........................G GCACTTCAGCCGGGTAAGCGTCGGTGGTTAGG 87401 28 82.1 0 .....A.....A.........A.GC... | C [87375] ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCACGGCTTGCACAAGCTTTTTGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATCGCCTACGGCGTGTTGGTTGGCGAAGTGGTGGCACCGATCCTGATTATTGTTGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCATTTACGATGATTGTGGCGTGGCTGATGGTGGGCGTGGGGGAAACGCTCGCCCTTGATAAGGTTGGCGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCTGTCGCATTTTTAGGGGCAGGGCGGTTTGCGGTAGGGAAAGCACCCGCGTGGCGATGAAGGCGGGTGTGCTGATAACAAAAGGGTCTGTGGACCCTTTTTTATCGAAGCTTTTTAAGTCTTTGATTTTATTGTGCTGAATTGTATGTCATGAAAAAGGGTTTAAGGGGGATTTTTTAGGGGAATTCTTTATCTTACAAGGTGATAGGTGTAGATTGTTCCA # Right flank : TGTAGGTCGGGTAAGCGTCAGCGCCACCCGACAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAAGCCAATATTTCCGAATAAGCCTGAATTAGCACCGTCTTCATCGGGTTCGGATAAACGAAACGTCGCCCGACAAAAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGAAGAGCCAGCACGTACAAAGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAATGGCGGCACCGCATCACATTACGCCAGCACCAGATCGCCCTGCGGGTGGCATGAACACGCCAGCACGTAACCCTCGGCAATTTCCGCGTCAGACAGCGTCATGGTGCTGGTGACGGTATACTCGCCTGAAACCACCTTGGTCTTACAGCAACCGCACACCCCCGCACGACAGGCAGCCACGACCGGCACCTTGTTGCTTTCCAGCGCCTCCAGCAGCGTGGTGCCCACGCGACCAAAGAAGGTCTGCGCTGGCTGCAGCTTGGTGAACT # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //