Array 1 1926647-1926254 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP006850.1 Nocardia nova SH22a chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	==============================	===============================	==================
   1926646	    30	  93.3	    31	............................TT	CACGCTCGGCACCCAGGCGCGCACCCCGGCC	
   1926585	    30	  93.3	    31	............................TC	GTAGGGTTCGCAGCGCCGACAGTCACGACGC	
   1926524	    30	 100.0	    29	..............................	CAGTGCGCGCGCGGAATCGCTTTCGTTCG  	
   1926465	    30	  93.3	    31	............................CC	CACCCGGATACCTGACGTCGATCCTAAAAAC	
   1926404	    30	  96.7	    31	.............................G	TTCCTAATCCGCGACCGGCAAAACTTGTGCG	
   1926343	    30	 100.0	    31	..............................	TCAGGTAGCGGCCCTCGATGTCGGTGTGCGG	
   1926282	    29	  83.3	     0	.........A....T..........-..TC	|                              	
==========	======	======	======	==============================	===============================	==================
         7	    30	  94.3	    31	GTGCTCCCCGCGCACGCGGGGATGGTCCGA	                               	       

# Left flank :   CAGATCGGCCAGGCCGCCTACTCCGCCTCCAAGGGCGGCATCGTCGGCCTGACCCTGCCGGTCGCCCGCGACCTGGCGAGCCTGAACATCCGGGTGAACACCATCGCCCCCGGCCTGTTCCACACCCCGCTGTTCGAGTCGCTGCCCGAGGAGGCCATCAAGGCCCTCGGCGCCCAGGTCCCCCACCCGGCCCGCCTCGGCAACCCCACCGAGTACGCGGCCCTGGCCCGCCACATCGTGGAAAACCCGATGCTCAACGGCGAAACCATCCGCCTCGACGGCGCAATCCGCATGGCGCCGCGCTGATTTCAGGTCCCAGCGGTTGACGGCCCGGCGCATATCAGCGCCGGGCCAGCCATTCAACTCAGCCACGGCCCCGAACCCCGTCGGCCACCGCGCCCCAAGCCCGCCAGGTCACCTGAACCGAAAGCACCCCGATCAGCGCGATGAAACTGAATGTAAAATCGGCAGTTGCGCTACAAACCACCTGGTAAACAAGT
# Right flank :  GAGCTACGGCTGCGGACATCAGCATCAGCGGCGTGTCGGCCAGAAGATGCACCACAGGATCACGGCAATTGGGATGAGAGCGACCAGCAGGGGGCCTGCGGTCATCCGTGCCTCCTCGGGGGAAGCGCGCCCCACTTCGAGAAGGACAGCCGGGGCAACACGATCTCGACGTTGACGATGGACATCAGGTTGTTGAGCGTCAGAATGTCGATGTGCTCGGTGGATGGTGCGATAACGGCATCAACGTCAGCGGCCCGGACCTGATCGACCAGAGGTATGAGAGATGTTGGGGTCCAAAGGATTTCGTATCCCAGCCGACGAGCTAGTCTGGACACCTGGGCTGAATCCCACTGTGGCGCAAGGCTGGTGTCGTAATCCACCCAACCGAATGCTGTCGGCCTCGTCCGCATCTCTGATCCCCGCTGGTCGTTGGCAACACAGTGGCGGCAGGGTCGGCGTCATGACCACACCCGACAGGAACGTCCTGTGCCCCGACTGGT

# Questionable array : NO	 Score: 5.53
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGCTCCCCGCGCACGCGGGGATGGTCCGA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [4,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.10,-12.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [36.7-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.55   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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