Array 1 3787088-3787895 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP055930.1 Enterobacter sp. RHBSTW-00175 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3787088 28 100.0 32 ............................ TCAAGCCATACGACATCATGGTTAGATAACCT 3787148 28 100.0 32 ............................ CTGTAGAATTGTTTTCTCTTTGTCTACAACTA 3787208 28 100.0 32 ............................ TGAACGGATTTACCATCCGGCGAGATAATCAC 3787268 28 100.0 32 ............................ TGATGGATTCATTGTCTCAGGGGGCTTAATGA 3787328 28 100.0 32 ............................ TTGCTCACTTGGGTGAACAGGCCGTACTCAAT 3787388 28 100.0 32 ............................ TTTTTGAGGCCACGGAAGGCAAGACGTGAAAT 3787448 28 100.0 32 ............................ TTTACCATCAAGCCAGTACAGCATTGCAATCG 3787508 28 100.0 32 ............................ ACCGAAAAGAATGGCCGCAACGATATTTGGAT 3787568 28 100.0 32 ............................ GAAGGCCGTCGATATGTCCCGCGCTAACAACC 3787628 28 100.0 32 ............................ TTCCCACTGCGCACCATTTTTGCGGGCAAAGC 3787688 28 100.0 32 ............................ TGAATAGCCGAAGTCAAGAGCGCTCAGCACTT 3787748 28 100.0 32 ............................ TATCCCAGAAGTTTGAGAGTCTCCCGACTCTT 3787808 28 100.0 32 ............................ GCATGGCGTCTGAAGTGTGGGTCACGTTTAAC 3787868 28 82.1 0 .....................AA.ACT. | ========== ====== ====== ====== ============================ ================================ ================== 14 28 98.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTTCCGCAGACTCAGCCTGTTTGTCGTTGTCTGGGGGCGTACCTCGAAGACGTTAAAACCGGCCTCGCAGAATCAATGCGAGATTTTCAGGTCGTTGAATTTGAAGCGGAAGAAGAACTGCCGGGCAAAAAAGAGTGGCTACTGGAAGATACGGAAACGAAGTGCGATTACTGCCGGGCTCTGAACCATGTGCTGCTCATATCACATTTTGACCTCGACATGCTGCCGCACCTCTCGGGATTGCTTCATGACATCACGCATTCAATGGCGACAGATTTGGTGGCATCCGGTGGTGAAAACACTGTGATCCATATTATTTCCTGAGTGCGGACTTGAGCGTCGGGGAACAACCCCGGCGCTTTGTGGATGAACCCTTTTTTTTGGTGACTTTATAACTTATTGATTTATAAAGACAGGATAGTCTCACTTGAAAAAAGGGTTTACTGTCTTAAAGTTGATTATTTTCTTTACGAACAATAAGATGGCGTAGATTCGTTTCA # Right flank : AAAACTAACCCTCTAAAACATTTATGGTATCTATTTAAAACTTAATATCAGCAAATCTGCACTCTTTATTTTTTTCACAATAAATAAAAAATTCATTCATATATTAATTATATTTCAATAAATATATTATTCGTATCAATAATGCATTGAATGTGGAAATATTTTTTTCGATTTATTATCGCGGTAATGACTATTCATTCGATTCCCGTCACAGTTGTTTTCATCTTATTTTCGATAACATACTGTACATTCAATGTCTTGAAATGAAAGCCCTTGCCATGGCAGTAAACAGCATTACTCCAACTGACTTAAAAACCATTCTGCATTCAAAACGTGCCAATATTTATTACCTGGAGAAATGTCGCATCCAGGTAAACGGTGGTCGCGTTGAATATGTTACTCAGGAAGGTAAAGAATCATTTTACTGGAATATTCCCATCGCCAATACCACAGCCGTCATGCTGGGCATGGGAACCTCCGTAACGCAAATGGCGATGCGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3797715-3798463 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP055930.1 Enterobacter sp. RHBSTW-00175 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3797715 28 100.0 32 ............................ TACACCCGAAAGCAACCACGCCGCAGGATGCC 3797775 28 100.0 32 ............................ TTACGAACGGCAGAGGGAAGGGTGAAGAAATC 3797835 28 100.0 32 ............................ TTGCTGATATGTCAAATCAGCACGAACACAAC 3797895 28 100.0 32 ............................ ACAACAAGCCAACCGGGTGGCCCTCAACGGTC 3797955 28 100.0 32 ............................ CCAGTTGATCGCGTTATCGCTGTACAAGATGA 3798015 28 100.0 32 ............................ AAATGTATTGCGGAAACGTGGGTTAAGCCTAT 3798075 28 100.0 32 ............................ AAATCCACGCTTGGGAACGATAACGACCTGAT 3798135 28 100.0 32 ............................ ATGAACTATTCGAAATTCCTCCAGACCTGGCA 3798195 28 100.0 33 ............................ ATATGATGAAAGTACTGGTTACGCTTCTTTGCC 3798256 28 100.0 32 ............................ CCCGCCGCTCAGCTGTGACGGATAGGCATTCT 3798316 28 100.0 32 ............................ AGAGCTACGGTTAAACATAGAACGCTGGATGT 3798376 28 100.0 32 ............................ ATTGCGAGAATAGCTCCATTGGGAATTACCCT 3798436 27 89.3 0 .....................CC.-... | T [3798456] ========== ====== ====== ====== ============================ ================================= ================== 13 28 99.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGCGCTACGCGTTCGCTTTCGTCAGGTGTTAGCGTCCGGCCAGCACTTTTACGCCGTGCGACATTGCGCTCATTAATCCCGGTTACACGTAAAATGTCTGCCTTTGACATCTCAGTCCATTCATGGATGTTGTCGAGCACGCTGACGGGTAATCCCTGATTGAGGTATTCGACCAGCCGCATGCCCCGGTTAGCAGGTAAACCTGCAAACCGCCAAAGGGCGTCATCAGCCGGTTTCTGCGCGGGGATCCAGGTTCTCATATTCCCTCCTGTTTAATGTCATTTGTCATGTTTCAGTATAGTCATTTGTCGGGTGAGATGGAATGCGTGTTTTTTGGGCGGGCAGTGTAAGAGAACGCCAGTAGTTGACCCTAATTTTGGAGTGATTAGTAATTAGTTGATTTTAAAATGGATATTCGACAGGGGGAAAAAGAGGGTAAGAGAAGGTTTTTTAGCTTTTTTTGTATGAAAATCAGGATGGTGTGGCGTTAGTATTCCA # Right flank : ACATCTGATTAAATAATCTACAGCTTTTTTATATCCCTGGTAAGCGCAGCCCCACCGGGAGAACAAACGACAAAAAAATAAGGCCGGGAATATCCCGGCCTTAATTTAATATTCATCTGCCATTACAGGCGAAACTAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGAGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //