Array 1 236158-233430 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGVVN010000002.1 Methylovulum psychrotolerans strain S1L 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 236157 28 100.0 32 ............................ ATTGCCCCAAAAATCTAGGATTTTCTTGACTT 236097 28 100.0 32 ............................ GCACACAAACAAAGCGGGATACACTACGGTAA 236037 28 100.0 32 ............................ ACTAAAAAATCTAATCCGGTAATGTCAAAAGT 235977 28 100.0 32 ............................ ACTGGGCGCTCGATTAATCCGCACTGAGCATA 235917 28 100.0 32 ............................ GTTGGTGGTCATCCTGTCGGCGATACGGGCGG 235857 28 100.0 32 ............................ TAACGAGGGTAACTTCGCCTATATATCTCAAA 235797 28 100.0 32 ............................ TGTTTCAATTGTTGATATTGTTTTAAGTGATA 235737 28 100.0 32 ............................ TTACTCCGCGTTAACGCCATAAGTGCAGGGCG 235677 28 100.0 32 ............................ AACTCTATACAGGCAATCACGTTTTTTTTCTT 235617 28 100.0 32 ............................ GACAGGGCCAACGGGCGCAACAGGGCCAGTAG 235557 28 100.0 32 ............................ TTGCGGCCTTTACTGACCGCCTGAGCTACCAG 235497 28 100.0 32 ............................ TAAGGTATCCTGCACTGCATATTTATCAGCCA 235437 28 100.0 32 ............................ GATCCCGCTTGATACTCGCGCTCACCGTGAAC 235377 28 100.0 32 ............................ GCCGCGCGGTGTGGTTTGGGGTAATGTGTCAA 235317 28 100.0 32 ............................ ATAACTGGTCAACAGGTCTTCCTTAAATGCCG 235257 28 100.0 32 ............................ TTGATTCGGGAGGTACGCGAAGGCGGCAACCC 235197 28 100.0 32 ............................ ACGCGCTCCGCCTCTTCCTGCTCTTGTTTCGT 235137 28 100.0 32 ............................ TACGCGCAGGCTATCCAGCTCCGCCGTCATAT 235077 28 100.0 32 ............................ TTGTGACCTATCCCTATCATCTAGTCTATTCG 235017 28 100.0 32 ............................ AAATTCGCGCACATACTGACATTGACTATTGC 234957 28 100.0 32 ............................ ATGATAGCCTGCACCGTTGAAGCCGACGAATG 234897 28 100.0 32 ............................ ACGACGCGCTTAAGGCCGGCTGGCTAGGCCCT 234837 28 100.0 32 ............................ TCAAAGCACTTAAGCTTTACCGTAGCAAAACG 234777 28 100.0 32 ............................ TGTATCGTCATCGTCGCCACATTGCCTGTCTG 234717 28 100.0 32 ............................ TTACAGACGGTATTGAGATATTCTCCGGCCAG 234657 28 100.0 32 ............................ CGTTAAAGCTTTTGGCGTAACACCGTCATCCT 234597 28 100.0 32 ............................ ACAAGCTGATTAAGGTATTTATCCCTAGTGAG 234537 28 100.0 32 ............................ TATGACGAGATAATAATGATGGGTTCGCCACC 234477 28 100.0 32 ............................ AAAAGACCAAATAGGATATTGCCGCCGCATCA 234417 28 100.0 32 ............................ AACTGCCAGGTGGGCGATACCGAGCCGATACC 234357 28 100.0 32 ............................ ATTCAAGCAAATATCCCAAGTTCGAGTTTGCG 234297 28 100.0 32 ............................ TTGGAGGAAGAGAAAAGTACCGCCAAGCTAAA 234237 28 100.0 32 ............................ AGGGTCGGCAAGTGCTACCGCATCGGTTCCGG 234177 28 100.0 32 ............................ TCCCCCAGCAAGTCGGTGAGCCTTTGCGACCT 234117 28 100.0 32 ............................ TCAAGATGGCTATACTGTGCTTGCTTATCCGG 234057 28 100.0 32 ............................ GTTCCGGGGCAGTAAACGGCACAAATTTGTCT 233997 28 100.0 32 ............................ GCTTGGCCCATGGTCGATGTCCACTTGTGGCC 233937 28 100.0 32 ............................ AACCGCATTAAACGCTTGAAATTTAAAATAAA 233877 28 100.0 32 ............................ CGAAGTTGTCGAAACGCAAGACTTTAAAAAAA 233817 28 100.0 32 ............................ AACCGCATTAAACGCTTGAAATTTAAAATAAA 233757 28 100.0 32 ............................ CGAAGTTGTCGAAACGCAAGACTTTAAAAAAA 233697 28 100.0 32 ............................ TTGCTGTTACCGATGAGCGTTGCGGTGGCGGA 233637 28 100.0 32 ............................ GAAACTAAGCAAAAGCAATTGCAAGATTTAAA 233577 28 100.0 32 ............................ TGTTGCAAATCTGACACATTCCTATCGGCATC 233517 28 100.0 32 ............................ TGATGTTTTGCGTGAGTTCGTCCATGTCGCCT 233457 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 46 28 99.9 32 GTTTACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGCACAAGCATTCGCCCTGTGCCGGAAAAACTCAGCGGGTTCGCCACTTATCAACGCGAACATCCCAAAACCAACAAAGAGCGTTTAGCCAGGCGTTATGCTAAAAGGCATAATATGGCCTTCGAAACGGCGTTGCATAGCACTATTGATTTAACCGCCAAGGCTCCTCCTGACGCGGATTACAAAACGCAATTCCGTTATTGCGATATGCCGCAAAAAACCATTGCCGCCCCGTTTATCCGCTTAACAAGCCTGAGTGGCGGGCAGACGTTTTGCCTGTGGATTAAAAAAACGGTAGTTGCAGAGCCGTCGGGGGCGGCATTCAGCAGTTATGGCCTAAGTGCCGTTTCCACTGTACCCGAATTTTGACCCATCTTTTTTGCGCTCTTTAAAAATATAGTAAAATCAGTTAGTTGTGTGGCGGTGTTTTTTGGATGGTGAATAACGGTAAAATCTCCTGTATACTGCTACACAGCTGGCTTTCAGAGGTTTTGAGGTCA # Right flank : ATAAAATGAATATCCCACGGCGGCGAATATGACGAACTTTTTCATGGTCACGTCGTGGGGTTTGGGGGCTTTGCCAAACTAGCCCTATAAATTCTCCAGCGTTTGCGGATCTAATCCTGTCAGTTCGATAATTTCGTCTAGCGTGTAGCCTTTGGCTTTCATCTTAGTCGCCAGCGTCACTTTTTCTGCTATTTTCCCTTGTGTTAATCCCTTAGCCAAACCTTTAGCTAGGCCTGTAGCCAAGCCCTGAGCTAGGCCTTCTGCCAATCCCACAGCTAAGCCCTGCGATTTACCGTCTTCCCGCGCGGTAGCGAACGAATTATTCAAATCCCGGTAATACTTTAGGCTGTCTTCATATTGTATGAGCTGTTCATGGTTAAATTTGGCAATTTCGGCGACTTCAAATAGGCGTTTGAATATTTTCTCCGTCAGTTTGGCAGGGATTTTTTCCAGTTCGGGTAAATGCTTAAGCACATACAGCCATTTTTCAAAACGGCTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTACTGCCGCATAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 357323-356395 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGVVN010000001.1 Methylovulum psychrotolerans strain S1L 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 357322 28 100.0 32 ............................ TTAAAATTCATTTTGCGCGGTTCCGGCGTTTC 357262 28 100.0 32 ............................ TTGGTAGCTTCTGGAATAGTTATTGTTCAGGT 357202 28 100.0 32 ............................ AGACGTTTAGCGGTCGAGTGCATCAAAGGCAT 357142 28 100.0 32 ............................ AAGCTCTGCGCGTATACGGGCAACTTCGGACT 357082 28 100.0 32 ............................ TTGATAGCGAGGCCGAAACCACGCCCACCAAC 357022 28 100.0 32 ............................ TTGTGACCTACCCCTATCACTTGGTTTATTCG 356962 28 100.0 32 ............................ AAAGCGCAATAGTAAATGATGTCTTTCATCGT 356902 28 100.0 32 ............................ ACGTTTATGCCGTTTGGGCAAGTTCCGACGAG 356842 28 100.0 32 ............................ ATGACTACATGTAGCTGACGGCGACCACTTGG 356782 28 100.0 32 ............................ ATTTGCCGCGCAGGGGTTGCTGCTGACGGGAA 356722 28 100.0 32 ............................ AAGGCGGAATTTTTAAAAGCCAAAAACTCACC 356662 28 100.0 32 ............................ TTACGGTGTTGATAAAAGCTAGTTACACTACG 356602 28 100.0 32 ............................ TTGCCACCAAGGGTGTTTGTTTATCATGATGG 356542 28 100.0 32 ............................ TGTAGATGGTTGCGCCTACCGGCATACGGTTT 356482 28 100.0 32 ............................ AACCGCATCCTTAACCGCTCGCGCCAGGAATA 356422 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 100.0 32 GTTTACTGCCGCACAGGCAGCTTAGAAA # Left flank : GGATAGGACGGCCACAGCGCAGCCCCATCCGTGCTAGCACTGTAAAATTCGGTGTGCATATTTCTTAACATGGGCGCGAAGCAGCCGCCATTGCGGCCAGCCAACAATAGAGGCCGTCACGCACCGGACGACCCAAAGCGGAGTGCAATGGCCTTTAGCCATTGCACGATGACCTAACCGAGTGTGCCAACAGATCGCCTGCCGATTGCTTAACACCGGACGCTATAACACGAAAATACCCACCCCTCCCCCAAGCCGCTCCCCTAGCCTTAGAAACTCAGAACCCCGGCCCATATCCAAACGCGAACAGACAGCCTTGCAAAAGTTGGGCGGATAAGTAGCAGGGCATAATACCGACGCTGGTTTTTTACCCCTTATTTTTAGGACAAATAAAAAGACATTGAAAAACAATTGGTTGCGTATTTGTGTTTTTTTATTGGTAAAAAATGAAAATATCGTTTAAGCTGTTGTTGCGTTTGATGATTTTTTGTTTTTATTTC # Right flank : TTATAGGGGTCAAAACGGTTGAATGTCAGCAAACCGCACAATCCGCCCAAGCCATTTCCGTCGGGCATAAAAAAACCGCAATCAAGCGGTTGATTTGTATCGAAAGTTTGGTGCGGCCTCTATCACATTATGCCCTGTAGGCCTTGATAATAAAGGGTTCGTCAAATAAAACTTTCAAATATACCGCCATTTATACCGTCACATGCTAAAGGTTGCCCCTGTTTTCCGCACAAACATGACAGTGCCATCTTATCACAAGATGAAAAATATTAAGTTTTGCTAGGTTTCCGGCTCCGATTAATCCCCCGCGCGTACTGGTTGAATGTCTGTGCTATCGAACTTCAAGTAGTACGCGGTATAATCCCGCGCCCGCGCGTACTGGTTGAACCCCCCTTTTTTATAGTCCTCAAAAACTCTTTTTTATAACCCCGAAAGTCTCGAATATTTCACCTGCCTTTGTTCCGGTGCGGGCTTAGGTACGCTTAAAATTAGCAATAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTACTGCCGCATAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1453172-1452964 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGVVN010000001.1 Methylovulum psychrotolerans strain S1L 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1453171 28 100.0 32 ............................ GTCGTCTGGGCTAGGGCTTGATGGTGACTATT 1453111 28 100.0 32 ............................ TTTACGATCTCAGCATAAGCAGGAGCGGACTC 1453051 28 100.0 32 ............................ TGAACGGAGTGCATAGACGCTAAAGCGGGATA 1452991 28 96.4 0 ...........................T | ========== ====== ====== ====== ============================ ================================ ================== 4 28 99.1 32 GTTAACCGCCGCACAGGCGGCTTAGAAA # Left flank : CGGCGCTGCTCTACGAAGAATCCCCGGAAAGCCACGCCCAACGCCAACTGCAAATCATCCAACAGCGCGAACAACGGGAATTTTTAGCCGTCAACGGCATAGACCACAAGCCCAATAAAAAAGAACGCCGCTTGATCCATCGGTTTAAGGATGGGCAATAACGCCCATCACCTTACCGCGTTTCCGGTACAGAAAAGCTCCCCTCGCGATCAATATGAGCGGCATCAAACGGAGCGCAAAGGTCTTTAGCCTTTGGACGATAACCTAAAGCCAACGCATTAACATTCCGTTTAACCCCCCCTGTAGCTTACCCATAACCATAACAGACCAGCCCCTATTTTTACCCTCTAAGCCTGCACCCCCAAAATTTAGGAATAAATTTAAAGCCAAAATTTACTTAATATTAATCAATAGCTTATGAAGACACCAAAAAACATTGGTTTTTCTTGCCAAAATCCCCGTAAAGCCTATATACTCTAGCCTCTGGAGCATATAACTCC # Right flank : AAATCATTAGATTGCGTTAAAATACATTTTGTTATTGCGGCAAAATCCCGCTGCGTTCGCCGCCAGCACCAACCCTGGTAGCCGTTTCTTGATACGGCTAGAGTTAAATTGACCGTGAGTTGCGGGCCGGTCACGCAATAAACGGGGGCGAATCAAGCGACGCCCAACCTGTTATAGGGCAGTTAAGCAAACGCCTGACTTACCATTGGCAAACTAGGTTAGGCCATCGTGCAATGGCTAAAGACCATTGCACTCCACTCCATGTCGCCCAATCTTAACCTAACGACATAAGCCGCTTATTCACCCTCCCCCATAAACAATACCATTTCATCCGTGCGGGTGTAATCGCTGGTTTTATACAGCAAATTATTATCAGCATCGGCGATCACAAAAAAAGGCAAGCCCACTTTCAGCTCAGGGAAGCGTTTGTCGTTTTGAAATTGTTTAAACTCAGGATCATTATCGTAAATTTTGAGCAACACGACCTTTTTCAAGCTGTC # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACCGCCGCACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 27375-29505 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGVVN010000005.1 Methylovulum psychrotolerans strain S1L 5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================ ================== 27375 29 100.0 32 ............................. CCTTTTACGATGACGTTTTGTATGAACAGTTG 27436 29 100.0 32 ............................. GCTTGCGCGTGTAAATGCGGTTATGTAGCCTG 27497 29 100.0 32 ............................. TCGGCTAATGGATCGTAAAAGCCTGATAATGA 27558 29 100.0 32 ............................. ACCCTTCAAAAGGGCGCGGTCGATGTATTGGG 27619 29 100.0 32 ............................. CCACGCAATTCATAGCAAATAGACACATAGCC 27680 29 100.0 32 ............................. ACCAGACCGCCGACGTGGTGCTTGCGGCTGTG 27741 29 100.0 32 ............................. TGCTAGATATGACCCTTATGTCGATGCTTTAG 27802 29 100.0 32 ............................. ACCAGACCGCCGACGTGGTGCTTGCGGCTGTG 27863 29 100.0 32 ............................. GTCATTTCGCACGCTTAAGGCGGTGCTGCCTC 27924 29 100.0 32 ............................. TAATTACAGACGGCGGTATAGTAGTCCACCAA 27985 29 100.0 32 ............................. ATGTTGGGCGCAGCTTGATGACATTATCCAGC 28046 29 100.0 32 ............................. TCTCTTTTATTATGTAAAAGATTACATAATAA 28107 29 100.0 32 ............................. TCAACACAGCAGTTGCCGCGCTTTTGCCGACT 28168 29 100.0 32 ............................. TTTTGCGCTACCGACATTGTGATTTTTGACAA 28229 29 100.0 32 ............................. AATTGCAAAATGAACTTAACGCGCTGAAAAAA 28290 29 100.0 32 ............................. TGAAGGGGTCAAACCCCCAAACTGGCGAACAG 28351 29 100.0 32 ............................. CGAACCACCCCGATATTATCCGTATGGGCGAT 28412 29 100.0 32 ............................. CATAATGCCCTTATCTTCTGGCTGCCCAACAT 28473 29 100.0 32 ............................. CCCACCGCCAACCTGCCGATGGACGGTAAGCG 28534 29 100.0 32 ............................. TCAACAGCGAGTTCAACGACATTTATATTGAG 28595 29 100.0 32 ............................. CGCACGGCGGGCGGAGGCAGAATGGGGATGGT 28656 29 100.0 32 ............................. TGGTCAGGTCGGCATATCACAAGTTAGGCGAG 28717 29 100.0 32 ............................. CCGCCTGAGAATTTTGGGCTGGCAATGGCAAA 28778 29 100.0 32 ............................. CAAACGGCGGGGTCATTAACATGATCGATTCA 28839 29 100.0 32 ............................. TCTGGTTTTGCTTTTTTGGATTGGGTAAATTT 28900 29 100.0 32 ............................. CGAGGCAACAAAATTGCTGCCTGTAGTCGTAG 28961 29 100.0 32 ............................. TTATTGTCTTAGGTCAAGGTGATGAAAAACAG 29022 29 100.0 32 ............................. TTTGAGGGCAGCAGCAAAGATGTGCTGTACTT 29083 29 100.0 32 ............................. AACTTGGACAGCGTTACAGCGGCGACCCCGTG 29144 29 96.6 32 .........G................... AAAAGAAACAGATCAACGAAATGAAAGCGGCT 29205 29 100.0 60 ............................. GCACGTCGTTAAACGCATGGTGTAAACAAAATCCGTTCCCCACGCACCAGGCTTACTAAG 29294 29 100.0 32 ............................. CTATCCAGTCCGGCCAGCAATTCGTCATGTTC 29355 29 100.0 32 ............................. CGTGCGGCTATTATTTTGACAAAGCGGAATGC 29416 29 100.0 32 ............................. TGAATTGAAATTGTCCGAGCCGACCACCTGCC 29477 29 89.7 0 .......................G.T..A | ========== ====== ====== ====== ============================= ============================================================ ================== 35 29 99.6 33 CCGTTCCCCACGCCCGTGGGGATAAACCG # Left flank : ATCCTCAAGAAAATCATTCCCACCATTGAAGACGTGCTGGCGGCTGGGGAGTTGACGATCCCCACTCCGTTTGAAGAATCTATAGCTCCCGCCATACCCAACCCGGAGAACATCGGCGATGTTGGTCATCGTAGTTGAAAACGCCCCACCGCGTTTACGCGGTAGGTTAGCGGTTTGGCTGATCGAGATCCGCGCAGGGGTTTATGTGGGTGACTTGTCGAAAAAAGTGCGCGAAATGATCTGGTCGCAAGTTGAAGATGGGCTTGAAGACGGCAACGCAGTGATGGCTTGGTCTACCAACACCGAATCGGGCTTTGATTTTGTGACGTTAGGCAAAAACCGTCGCTTGCCAGTGGAACTGGACGGATTGAAATTGGTGTCGTTTTATCCTATTGAGGGTGCAGATGATGCGGCTCTTTAACAACATGGAAAAAGTCAGAAAAATTGGTGGAAATTTAACAGCATTATTTCTTCTTATCTAACAATAAGTTAAGATAAGT # Right flank : ACGGAATAAATCTGTCGTTTGTTTAAATTGCACCCTACCTCCGTACTGACAGTTCCCTAGTTGCGCCCTAGTTGTGCCCTAATTGCGCCCTAGTTGCGCCCTAATAGCGCCCTAATAGCGCCCTAATAGCGCCCTAATTGCGCCCTAGTTGCGCCCTAATAGCGCCCTAGTTGCGCCCTAGTTGCGCCCTAATTGCGCCCTAATAGCGCCCTAATTGCGCCCTAATTGCGCCCTAGTTCCGCCCTAATAGCGCCCTAATAGCGCCCTAATAGCGCCCTAATTGCGCCCTAATTGCGCCCTAGTTCCGCCCTAGTGCGCCTTAGTTGCGCACGGCTTATTCCTACGGGGATTGGCGGGAATGATAAGCGCGAAAAGTGGCGTTTTTTTGGTAGGGTTCGGTGGGCGCAAGGCGGCGGAATCCGCCGTTTAATCATTCGGTTGACAGCGGTGTGTGGCTTGGCGGACAATCTTATCCGCATATCGTGATTCCAGGCAGGGGT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCACGCCCGTGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //