Array 1 74577-75538 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEBN01000052.1 Streptococcus macedonicus strain 19AS Sma19_trimmed__paired__merged_contig_52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 74577 36 100.0 30 .................................... GGATACTTAAAACAGCCGGAAGTTTCCTAA 74643 36 100.0 31 .................................... TAATATGTTTTTAGAAAAAATGTGTGGCTAA 74710 36 100.0 30 .................................... TGTCTTTAAAGAAATCATCTCACGCTGTTC 74776 36 100.0 30 .................................... CGTTTGGCGCTTATGTCAACGAAGCTTCTC 74842 36 100.0 30 .................................... TTCAGTAACTACGCCTTGATTTCCACTAGT 74908 36 100.0 30 .................................... GGTTTAGCTAGCTTACAACAGCAATTTAAA 74974 36 100.0 30 .................................... GACCGCCTGTAAATAGCGAATTGCTAGCTA 75040 36 100.0 31 .................................... TGATGAAATTTGGAATCAAGACCATAGCTAT 75107 36 100.0 30 .................................... GAAAGTGGTTCTAATCGAGCTAAAAAAGAA 75173 36 100.0 30 .................................... ATTACTAACTGGTATTCCGTATTTATCCAG 75239 36 100.0 30 .................................... AAAACAATATACGAAAATTCGTATTAGAAA 75305 36 100.0 30 .................................... CAACGATGCTAAAGCTAATCGTGAGAATTA 75371 36 100.0 30 .................................... CAAGTTGTAGAAATCCCGTACTGTGTAGCA 75437 36 100.0 30 .................................... TGGTTTATGGCTAAAAAAATAGGAATTTTG 75503 36 97.2 0 .............................A...... | ========== ====== ====== ====== ==================================== =============================== ================== 15 36 99.8 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : GGATGACTATCTTGATTATTCTTCTTTTATAACTATTTGTAAGACTATTACGCAAATGACTGAGAAATTTCCTAATTTTTATTGTACAATTTTCCCGTCAAATGAAAGTTATTTATATGTTACTAAAGAAACAGTTGAACATGTTACCATTGTTTCAGACTTTATTGAATCATTGTTTGACTTAGATTTTATGTATGAAAGATTTATTGGTAAATACCCATCAAATAATATTCCAAGTAAAAGTGAGTTTTTGATATTACTTCAAAAAAATGCAAGTTATCTGTTTAGTGATCAGATTTCATATATTAGTTTAGGAATTTCAGATATGGTAGCCATTAAGATTTTAAATAGTTTATACCAGTATGATAAGTCTGTTGTATATCCAATACCTAAGATAGACCCGCTAGAAATAAGCTTTTTAAAGGACAAAGATTGACTTTTTTGCCTAATCAAACTATAATCGATTTGTAGGATACAAAAACTAAAAATGACGATTTGAG # Right flank : CACTAATATGCTTTTAGACGAAATCATTTTATAATATTTAACCTTTTTAGCATCTTATGATGCTTTTTTCTTTTCTTGAAATGACTTCTAAAACTTTTTATAGCAACGTTTCTGTTTATCTGTTATAATAGAAACAATGATTAATTGTATAGGATTGTAAGATGGATATTCAAGAATTAAAAAAACGACAAGAGAAGATTCGTAATTTCTCTATTATTGCACATATTGACCACGGGAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAGACGGTTTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGCATGGATTTGGAGCGTGAGCGTGGTATCACGATTAAGCTTAATGCGATTGAGTTGAACTACACGGCTAAAGACGGTGAAACCTACATTTTCCACTTGATTGACACCCCAGGACACGTTGACTTTTCATATGAGGTGTCACGTTCTTTGGCGGCTTGTGAGGGGGCAATTTTGGTTGTCGATGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //