Array 1 81932-80012 **** Predicted by CRISPRDetect 2.4 *** >NZ_OIWX01000001.1 Blautia marasmi strain Marseille-P2377, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 81931 33 100.0 35 ................................. TATTGTTACATTGATGCCGTCATCCCGAAAGGTAA 81863 33 100.0 34 ................................. AAAATCATAGGCATTGAACCTGCCATCCGTATTA 81796 33 100.0 33 ................................. AAGAATCCTTAAACCTGCCTGAGAATAATGACG 81730 33 100.0 33 ................................. CCCATAGCAAGGGGAATCCTGGATTGTGCCGGG 81664 33 100.0 33 ................................. TACTATTTCCACTAGCACTTATTATCCTATTTT 81598 33 100.0 33 ................................. TACATTTTTATTATAGTATACGAACGTGAACTT 81532 33 100.0 35 ................................. CGGGATACTCGGCTTCAGAAGTGGAAGTTTAACAC 81464 33 100.0 37 ................................. TTTCTGGCGAACCCTGAACCGCCATTGTTGCTCTCGA 81394 33 100.0 34 ................................. AGAATATAACTAACGTGAATCCATCTCCAACACC 81327 33 100.0 35 ................................. AAACTTCGATACATCTAGTTTTTCCGGCTTGATTG 81259 33 100.0 35 ................................. GGGCCAGACACAGAAGCACAGACTATCCGGGTGCA 81191 33 100.0 37 ................................. AGGATTGACATGGATGATATTTTAGATGTTGCCGCAT 81121 33 100.0 34 ................................. TACCATATCCTCAACAGCAGGTATGTCAGCCGCA 81054 33 100.0 34 ................................. TGCTATAGACAAGTTGGATATGGCCTTAAACATG 80987 33 100.0 34 ................................. CATCTACGGCTGATGAGATAGCTGATAAACAGCA 80920 33 100.0 34 ................................. CTAATGCGGATTGGCATCTTGGATACTTCTCAAT 80853 33 100.0 35 ................................. TACGGACGAGCAGAGACATTATTTTTGGCAACATG 80785 33 100.0 34 ................................. AGAAAGAGGTGTACATGGAAAGGCTAAGTTATGG 80718 33 100.0 34 ................................. TTGATGAGTCGCAAAATCAGATACCGCATTGATA 80651 33 100.0 35 ................................. GTCATTCTGGATGTTAGCGGTCTGAACCGGTCAAA 80583 33 100.0 34 ................................. CAGTATCGAGTGGATAAGTGGAGAAGAGACTTTC 80516 33 100.0 34 ................................. GGATAAACAAAGGACTTGTAACAGTCACAGAAAC 80449 33 100.0 34 ................................. GTGCAAGGATATAGTTATTGAGTTGTGTTGTTGC 80382 33 100.0 35 ................................. AAAGCACCATACAGTTTACGGGTTTGGATAACTAG 80314 33 100.0 33 ................................. TGCGTCAAAGGAAAATACTTTCTTATTCATATT 80248 33 100.0 36 ................................. CTGCTAAAGCCTGTGCTACTAAATCGGATTCAGCAA 80179 33 100.0 33 ................................. AGCCCTTGCACTATGCATTTATCATAATAATCA 80113 33 100.0 35 ................................. TGTTTGTTGGCATGGTAAATAATAAAAATATGTAA 80045 33 84.8 0 .......................ACC.CC.... | C [80013] ========== ====== ====== ====== ================================= ===================================== ================== 29 33 99.5 34 GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Left flank : AGCACTGTCAAAAAACCGTCCACCAGCGGAGGAAGCCAAAAAGGAACCTCTTCTGCAAAAACCGGAGACGAAACGCCAATTGGCATGTTTGCAGGAGTTGGAGCACTTGCACTGATTGCTATATTAGCGTGTGTGCTCAGCATTTTAAAGAAGAGAAAAAGGGCATAATCGGGAACAAAAATAGAAACTACGCTATTATGTTGAAACATCCTGGCAGTTGGTCACATTCACAACTGCCGGGAGAAAGGGAGAATGCCTTTATCTTCCATGAAAAAGTTTTGTATAACAGGAAGAATCCTCTGTATATAGATACAGGGGATTTTTCAATGTAGATATCAGGTGCGAATGCCTAGCGAACATAAAATACAGGGGGGATTCGCACCTATTTTTTGATGGAAAAAGGGGGTACTTTGTGGTAAAATAAAATGGTAGATATATAAAACTTATTATATTTATGCGAAATTCATAAAAACTGTATATGGTTTTTGTGGAATTTTGCT # Right flank : GGTCACTCTTCACAAGAACAGAATAACATTCTACCGGAGCATCTGCCGAAGACAAAGACGGCAGGTGCTCTGTTATCTTTATTTGCATAAAACAGTAAAATATTGTTATTAAGATAATTTTATTAGACTATTTGCTGAAATCTGTTATAATACCTTTTAGATGTATTAAGGAGGAAAGCTATGCACAACAAACAAAAAAAGAATGCATGGATACCCTCATACGCAGTATTTCCGCTGCTTTCCTGTGTGACGGTGAATTGTATCGTATATTTTGGGATTTCCAGGATTGCCGATGAGTGGAAGCATTATGACCTGACGCTGCCGGTTGACAGGGCAGTGCCTCTGATTCCCGGATTCGTATCGGTTTATCTGGGGTGCTATCTTTTTTGGATCATCAATTACATATTGATCGCGAAACAGGGTGAAGAACACTGTGTCCGTTTTGCCGCGGCAGATATTATGTCAAGACTGGTCTGCTGTGTGTTTTTTATATTGCTGCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: R [matched GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1604144-1602924 **** Predicted by CRISPRDetect 2.4 *** >NZ_OIWX01000001.1 Blautia marasmi strain Marseille-P2377, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1604143 32 100.0 34 ................................ TATATATTTACTCATTTTCCGATTTTGTTGCAAT 1604077 32 100.0 34 ................................ GTACGTCTGGCCAAACACAGATGCCTCACACTCC 1604011 32 100.0 35 ................................ CTTCCTACATGTTCCGTTTTCCCATTGTTGACATA 1603944 32 100.0 34 ................................ AGTGTATGTGAGTTTATAGTGGGCGATTATGAGA 1603878 32 100.0 35 ................................ TAATGTGGCTAAGACACTGGAGAACAAACAGCTCC 1603811 32 100.0 34 ................................ TTATTGCAACATACTCCTCAGTTCTAGGTCTCCC 1603745 32 100.0 34 ................................ ATCCTGGTTGCGACATTGACTTGCAAGGGTACAA 1603679 32 100.0 34 ................................ AGCACCCTTTAAGCCTGCAAGCTGTGCCGATGTA 1603613 32 100.0 34 ................................ GATAATGTCCGTATACCAACGCAAGAGGAGATTA 1603547 32 100.0 33 ................................ CCTTTAAGCAAATACAGGTCATCATAATTACCT 1603482 32 100.0 34 ................................ GTGTTAAATACCACTTGCAATAGCTCTCCTTCGT 1603416 32 100.0 35 ................................ CATATTTGTACTGAAGATTTTTATATAATTCATTC 1603349 32 100.0 34 ................................ CCATGCTGGTGGCAAACTGGCGCCGGGCCAGTCC 1603283 32 100.0 35 ................................ TCAAATTCCCTATAACATGCCTCGCACCCCAGCGT 1603216 32 96.9 34 ............A................... TTGTGTAATCTCTTCATCATTCTCATTTACTACT 1603150 31 96.9 34 ............-................... AACATCATTTTGAAATGAGACTATGCAAATCTTT 1603085 32 100.0 34 ................................ ACCCTGGGGGCCGGGCAATTATCGCCTACTTTGT 1603019 32 93.8 33 ......................GT........ TTTTTACGGTCCACATTTGCATCACATGATAGA 1602954 31 84.4 0 ...........T...........AG..-..T. | ========== ====== ====== ====== ================================ =================================== ================== 19 32 98.5 34 GTCGCTGCCTTCGCGGTAGCGTAGATTGAAAT # Left flank : TGATAACAGATGAAAGGATCACACCGCCCAGAAAAAGAAAAAACAGGTGATTTCTAAGCTCCGGCAGAAATACGGCAAAAGCCACTGCGCCGAAACCATAAGCCGGACAATAAGGGCCAAATAAAAAACCCACATCAATAAACCGATGCTCCCTGACAGCCGCAACCGATGTGCCGATCGTCCAGCCGATGAAAGAATAGAGTAAGAAAAACCATAGAAGTTGATAAAGTGTGTAGTTCAAGTTATGCCTCCTTTGGGGTGGTGTTGCTTTTTATATACAATATACGTGGGGGTGGGAGATGTCAAGTGTATAGGGGGGAGATTTTCTGGTGCGAAATGACAGTGCACATGAATTTGCCGGGGGATTCGCACTTGATATGCGGTTAAAGGTAGAAGGGAATTTGGGAGAAATGGGATGAATCAGTGGAAATTAATTGTAAATGTGAGGGTAATGTGGTATTATATACAAAAAATAGTGAGAGTGTTTATGCATTTTTGCT # Right flank : GAATTAAAACTGATATCCAGATGGCAATAGCAATCGTCGCCTGCCATCCTACAGCCATGTATGATCAAATATCCTACACTACATTAAGTAATAATTTGCATTGACATACAACCAAATTTCCCGGCATACATTGTAAAAACAACGTTTCCGGGAGATTTTTCCTTGAAAAGTTATATAGAAGAACGTGCTATATCCATAGCCAACTACATCATTGAAAACAACGCAACCGTCCGCCAGACCGCCAGGGAGTTCAAGGTGAGCAAAAGTACGGTCCACAAGGACGTTACAGAGCGTCTGCTGCAGCTTAATCCTTCGCTGGCTAAATGCGCCCGAAAGGTTCTTGACGTGAACAAGCAGGAGCGTCATATCCGCGGCGGGATGGCTACCAGGGAAAAATATCTGCACAAGGTGCAAAAATAACAAAAGAGACTCTTGTTTTGAAAAAAATATGGGCGTATAATTGTTCCTATCAAAATACAAAAGTTTATTGTGAGGGGAAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTGCCTTCGCGGTAGCGTAGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA // Array 3 2729584-2730941 **** Predicted by CRISPRDetect 2.4 *** >NZ_OIWX01000001.1 Blautia marasmi strain Marseille-P2377, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2729584 32 100.0 35 ................................ TTTTGAGTCAAAGCTGATGACGTGGGAACCGGAGC 2729651 32 100.0 34 ................................ TCCTCCGGCTTTTTCGTATTTGTCTATGGCTTCC 2729717 32 100.0 36 ................................ CGGATGTATGGGTCTATGTAGCAGCTATAGTTCCTC 2729785 32 100.0 34 ................................ ACTGGATCCGTAATGACGTCGTACACATCCTTAA 2729851 32 100.0 35 ................................ TCACCGTCCAGCGCGATCAGCGCACCTATCTTCTT 2729918 32 100.0 32 ................................ ATACTACACCCCCGCTCACGTGATCCTGCGTG 2729982 32 100.0 35 ................................ AAAAGCAGATCAGCAATGTCCTCGGACAGCTTTTT 2730049 32 100.0 34 ................................ AGGGTGAGTCTTATAATATAAAAAGAGGGCATAA 2730115 32 100.0 33 ................................ TTTTCCATTGACTTAGATACTCATCCGAATTAT 2730180 32 100.0 34 ................................ TTTGAAGCTTTTGGAGAAAAGGCACCACTTTTTT 2730246 32 100.0 36 ................................ TCCTTCAACTGAAACGTGCATGGACTGACGCAGTTC 2730314 32 100.0 33 ................................ GACGAATTGGAAAAACTACTGAATGAATACAGT 2730379 32 96.9 35 ....................A........... CCTCGTGTAGTCAGGAACGTGATAGGTGCTGCCAT 2730446 32 100.0 34 ................................ CAGCACACTGTTCTCGATCACGTACTGCCCCGCC 2730512 32 100.0 33 ................................ ACCCAGGACTTAGACAGCTATATACAAAATAAC 2730577 32 100.0 35 ................................ TCAACTTGCCGGTTCTGTCCGCATTCTTCAGGCCC 2730644 32 100.0 35 ................................ GTACCAATGCCCGAGACTGACCCTACAACGGCGCC 2730711 30 84.4 34 .............-A..T...-...G...... ATTGACATCTTCTTTTAATCCTCTTATAATGAGG 2730775 31 81.2 36 .G....T..-.....T.A.............C ATTTAAATGTAGGGTATACTGTGATTGAAAACGAAA T [2730779] 2730843 32 84.4 35 ......TT.C..A..C................ GCTCTATTGCTTATTTCATGGTACAATACACTCTC 2730910 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 21 32 97.5 34 GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Left flank : ATGAATATCCACCATTTTTCTGGAAGTAGGTGAAGTGGATGTTAGTATTGATAACCTATGATGTGAATACAGAAACAGATGCCGGGAAAAGACGCCTTAGAAAAGTAGCCAAACAATGTGTGAATTACGGGCGGCGGGTACAGAATTCTGTTTTTGAATGCATCCTTGATAATACCCAATGTGTTTCACTGAAAGCCGTGCTGGAAGATATTATCGATAAAGAAGTTGACAGCCTGAGATTTTATTATCTGGGAAATAATTATAAGACAAAAGTTGAACATATGGGAGTTGATAGGGGAACCGCAGCTGATTCAACTTTGATTTTCTAGTGCGAATATGAAGTGAACAGAAAAACCCTGGGGGATTCGCACCGGGCTTTAGAGATAGGATGGGTGGATTTGGAGATGGTTTATGGGGCTAATTGGGATTAGATGATAAAATATGATTGATATTTGGAGATGTTGCACAAATATGTAATGATAGGTTTGGTAGTTTTTGCT # Right flank : TACACAATGAATCCATTGGCATCTAGCGAGGATTAAGGGGAATTGAAGAAAATATGACTAAGTGAACCTGATTTTTCAGAAAGGGGCGTGCAGAAGAAATGAATACCAATATTAAAAAGAAACTCCCTATTGGTATAGAGAGTTTTGAGAAAATTCGCATAGAAGATTTTTACTATATTGATAAGACCGGTTTAATTAAAGCCCTACTTTATAATTGGGGAGAAGTTAATCTTTTTACACGACCCAGACGTTTTGGAAAATCTCTTAATATGAGTATGTTAAAAAGTTTTTTTGAAATAAACACCGATAAGGAGTATAAAAAAAATCTGTTTGAAGGGTTAGACATTGCAAATGATACGGACTTATGTAAGACGTATATGGGAAAATTTCCGGTCATTTCAATCAGTTTAAAAGGTGTAAATGGAACTGATTTTTCGGCTGCACGCTCTATGATGAGTTCAATCATCGGAAATGAGGCTTTGAGATTCTACTTTTTGTCA # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 4471222-4471064 **** Predicted by CRISPRDetect 2.4 *** >NZ_OIWX01000001.1 Blautia marasmi strain Marseille-P2377, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================== ================== 4471221 23 100.0 43 ....................... TTGAAACGAAGAATATCTTCTGCATTTTCTTCATGTTTATAGA 4471155 23 100.0 46 ....................... TTGAAACTCTTCCAGTCCTTCACAGCCAAAAAACTCTTTATGCTTT 4471086 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ============================================== ================== 3 23 100.0 45 TGTTATACCGTACCTATGAGGAA # Left flank : GCGGTCTCCTATCTCTGTATACTCTACAGTCCCCGGAACAAAGGAAACCTACTTTTACTCACCGGATGATGAAGAGTTTCCACAGATGGTCAGTGATAATTTTATCCGAAAATATATGGCCTGCTATGGGGTTCCGCCCCAAAATGGCATATGGTTAAAGCCTGCCAAGGTAAATAGCAAAAATAAATATGTTACCAAATACAAAAATTTTTATATCAGTGGGTGGATGGGAGAATATTATCTGAATGGAGAAAGAAAATATCTGGACTTCCTGTATCAGACGGGCCTGGGAGGCAAAAACTCTCAGGGATTTGGGATGTTTGATATAATCTAAAAAGTCGGTCAGGGTAAAAGGAATTTTCGGTCAAGTGTAAAAAGCCAGTAAAAGCAAGGGTTTGAGCAATCTGTCAACTTTGACATCGACCGACTATTTGATTGAAAAAGGTTGAAAAACCATTAAAAGATAGTATAATGAAGAGAAAGAATGTTTTAAAACCTGT # Right flank : CAAGCCCCGGCTCATCACCGGGGCTACGTTATTATCAGATGCCTATAATGTCTCTCCACATAGCAGGTCCGCAGCACCCGTCATTACGTCCATTGGTGCCAACTTCTATGCCTTGCTTGCGGCGCTGTGTCTGGTAAGCGTTAATAGCAGTCACCGTCTGCCCTCTGGAATCTCCGTCCAGGTTGCCCTTGTAGATTCCCATGCCTTTCAGTATCCTCTGCAGGAGTAGGGCACTGGCTCCCTGGCTTCCATTCATTACGTTTTCCGGTTTGAACATATATCTTCCCTCCTTCACATTCTCTGCTGTCGGTTTCCCGGCTATCTCTCCGGCCAAATCCCTGTAACAATAATTCATGTCCACTCGGCCGCTGACCCCTGGGACGCTGCCGGAACTGCTATACTGCCAGATATCCACGTTGGGGACGTCCGGGGCCTTGCTGCTGTACTTGGCAACCCACTTAGTATACTTGTCCAGAGCACTGCCAATGACTGTCTTGTAC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTTATACCGTACCTATGAGGAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.87%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 5 4582274-4583305 **** Predicted by CRISPRDetect 2.4 *** >NZ_OIWX01000001.1 Blautia marasmi strain Marseille-P2377, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================== ================== 4582274 32 100.0 34 ................................ ATTGGAACAGGGGGATATCGCAGATCTGTGCAGG 4582340 32 100.0 34 ................................ ATTAGTGCCCAGACAATCAAATTACCGAGAATGG 4582406 32 100.0 34 ................................ AATATAAGGGATGGTGGTTCAGATGCGAAATCTT 4582472 32 100.0 35 ................................ GTCACAGTCCCGTTGCTGGTATATGACCCATCCGG 4582539 32 100.0 36 ................................ GCAAGCCGTCTGCATGATGCAGGTATGTCCACACGT 4582607 32 100.0 34 ................................ TATGGAATACTCTGTTCCCAATATTTCGATTTGC 4582673 32 100.0 34 ................................ ACATATGGACGGATAACAACTATTACTGGAAATT 4582739 32 100.0 35 ................................ GCCAATATGACGGATGAGCAGTTGCAGCAGGCTAA 4582806 32 100.0 33 ................................ ACATTGTCGTACGCTGTATTTGTCTCATTCAGT 4582871 32 100.0 34 ................................ ATTCCAGCCCTCCAATTCTTTGATTTTGTCCTGC 4582937 32 100.0 34 ................................ CTCACGCTCCTAACATATACATCGTCTCAGCCAC 4583003 32 100.0 33 ................................ TGTGGGTCTGCGTGCTGTGCCATCACATACGCG 4583068 32 96.9 34 ..........................A..... ATCCAGTTCCCTGAGTTGTCCATCTAACGTCTTG 4583134 32 96.9 35 .......................A........ ACCGCAATGTTAGGAAGGAAGTGTGCATCAGGCAG 4583201 32 87.5 42 ................A.T...TA........ GTTACTCCGGATGGTGTACCTTTGAACAATTGACGCAGGAAA 4583275 31 75.0 0 C.T........T...AC...-AA......... | ========== ====== ====== ====== ================================ ========================================== ================== 16 32 97.3 35 GTCTTCAGCTTCGCGCTGAAGTGGATTGAAAT # Left flank : TTGAAGCATCAGGTACTTTGGAGAAACCACAAAAATCCCTGAGAGGTTTTGAGTAAGCGAGGATAATCAGAAGAAGCTGGTCAGTAGGGATGGAGAAGATCCGCTGAATAATGAGTGCCCAAAGCAAGGCACGCAAAGGGTATTTGCGGGTTCGTCCCGTTGATGCATAAAAGTGATTACGAAAAGTAATCGGAATAATTTCATCAATGTCGATATGTTGTTCTAATAGAGTTAGAAATGCAGGTTTGTCATTTTCAAATTTGTCCTGACAATCTTGAAAAACATCATTTAAAGAAAGCTGTTTATATGGTATCATAAGTATCAGAATAACTCCTTTCTTAGGTGTGGTTAATGGTTTCTCGACAACTCTATTATACCATATCCAGTGAGGAGTTATTTGATTTTAATAACAAAAAAATGCCGTATTTATGCGGCTTTAGGCGTTTCGCAAACGCCTAAGAGAATGTATTAGGTGAGAGGTGGAATTGGTTATATTTGCT # Right flank : TAACCAGCTTGTAAAAATGTGATGTAGATATGCATTATCTTATTGATAATAAAACGGTAGACCAACAGGTGTCTTTAAAAGGGAATGGAAACACAAAGTAGTAATACGGGAGAAGCAGATATGATATACCTGGAAACAGAGCGTCTCATTATAAGAGATTATACAAAAAACGATGCAGAAGAATACAGCAGACTTATGGCAGATGAACAGGTAATGTATTACCTTCAGGATATCCGCCACCACTCCCGTCAGGAATCGGAGGAGGGTTTTAAGGAAATTTTGCTTGATATGCAAAAAGAGGACAGGCACAGGTATTTTCTTCACATGCAGAAAAAAGATACAAAAGAACAGATAGGAAGTATCGGTTATACGGTCACGGATATAACCCCAGTGGGAAAAATGGTTCATCTGGGCTATTTTACATATCCGAAGTTCTGGGGATGTGGTTATGTGACGGAAGCACTGAAAAAGGTTATGGAGTTTGCCTTTTTAACAGACGG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:0, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCAGCTTCGCGCTGAAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.40,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 6 4904759-4906514 **** Predicted by CRISPRDetect 2.4 *** >NZ_OIWX01000001.1 Blautia marasmi strain Marseille-P2377, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 4904759 32 100.0 35 ................................ AAACTATAAAAAACTTTTAAAGGACCACCAACTAA 4904826 32 100.0 34 ................................ CATCTGAGGATGAAATGGACGAATTGTTACGGCG 4904892 32 100.0 34 ................................ CATAAATCGTAAACTTCTCTAAATGTTATGTTAT 4904958 32 100.0 34 ................................ ATTACGTTCTGGCAGGTTCAGACGCTTTGTAAAA 4905024 32 100.0 34 ................................ CACTTTCTTGATGCTTATGGCCAGGAAACAATTA 4905090 32 100.0 33 ................................ ATCATTGAGCGTGTAAAATAAAGGAGGAAATGA 4905155 32 100.0 34 ................................ TGCGAAAAACTGTATATCCATAGGCAGTAAACAA 4905221 32 100.0 35 ................................ CCTGAGGGCCTTGCTCCCCTTGTCTGCCCTGTTTA 4905288 32 100.0 33 ................................ CTGTTGGTTCGCAACTCCGGGTACACCACGAGA 4905353 32 100.0 34 ................................ TTATACGGTGTAACAGTACCCTGTATCTCGACTT 4905419 32 100.0 34 ................................ CGGAGGGGTGATAAAAGGACGCTTATCCTACTGG 4905485 32 100.0 34 ................................ ACAGCGGACCTGTTTGGGGCAATGTGGAAGGCCA 4905551 32 100.0 34 ................................ TTATGTGAATCAGTCAGGCAGGTGTTATCCACTT 4905617 32 100.0 34 ................................ CACGAAATTCATCTACTGCCAACGGCGGGAACTG 4905683 32 100.0 35 ................................ TGTATTTTTATGTAATACTACCGGTCCCAGCCCCC 4905750 32 100.0 33 ................................ TGCTGATATCTTACTGCTGGAAGATATATTTGT 4905815 32 100.0 34 ................................ AAGCGTTTGCAACTTTGTTAAAATCTCAGACTTA 4905881 32 100.0 34 ................................ TTTCATGCCCACCTCTTTCTCCGGCGCTTAGCAA 4905947 32 100.0 33 ................................ TGCGATATAATGTGGATGAATCCTTACCGATAA 4906012 32 100.0 35 ................................ ACTTTATCCAGTATGTTTGTGCACATGCTGGATAC 4906079 32 100.0 33 ................................ CCTGGGCCGATACGCCTCCTCCTGCAGTCATGG 4906144 32 100.0 36 ................................ ATCAACTGCCAGGGCGCGATTAAGATGATCGTTAAT 4906212 32 100.0 35 ................................ GCTCCCTCATGCATCTGCATAAGATACGCTGTCAG 4906279 32 100.0 40 ................................ CCCGGTATCAAAATTAATATCATTCCATGTAAGGGCTATA 4906351 32 100.0 34 ................................ ATTACAGTGAATTTCATTCAGAACTTCGATTATG 4906417 32 100.0 34 ................................ ACCTCCTCCATCTCTGATTCTATCTGCCGTTTCC 4906483 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================== ================== 27 32 100.0 34 GTCACTTCCTACACGGAAGTGTGGATTGAAAT # Left flank : GAAAATATCTGCGGGTTGGAAAAGGGGCAACAATTGGATTTGGACACTATGAAGTATTTTATGACAAATAGAGAAGAACATATATATGGCAAAGACAGTTGAGTCAGAAGCGATTAATATTAAGAGATAATAAAAAGGCTCACTGCTATTTCGTGGAAGTTGAGAGATTTATTGTTAATATAGTGTTAAAGGCTTCTGGTCCTTATCCGATGGGTACTATAGAGAAATCTTGTCAGGGTTGGGTGAACCGTGCTTGAGTGCGGTTGAGTTTTATACAGAGTTTCCGTATGATTAGAAGAAAATATATAGATAATTGTCAGGTGCGAATGTAGAGTGAACATGGATTATCAGGGGGATTCGCACCTGAAAAAAGGATGGAAATATAAAGATTGTATTATTTTAATGGAAATAACGTAAATCAGGATTGCAATTTGTGGAAAGAAGGGGTAGAATTTAGAAGAATGATACAATATATTTGGTTAAAATTGTATGATTTTGCT # Right flank : TCGGGATGATTTTGAGAAACGTATTTCAATGACAACAGCCAGGAATACTATACGAATATCACCGATTTTGGAGTAATTACTGTTGTTGCATTCAATAAGAATAGGTAACACCTATCCATAAAATATCTTGTCTATGTACATAACTTTCCCCTGTTTTAAGTGAAAACTGTAAGTGGATTTTAAAGTAAGACACTATAAAAGCTGTTTGAACCTCCAGATATGAGACAAACAAGCAAATCTTATATACCGGCATATATTAATTGTGTAATTATCTTCTTATTACAATCAAAAAGTAAGGAGGAATATTTCATGATTGATATAGAAGCATTAAGGGCGCTACGCCCTTTTATTATCTATACTGATAAAGATATCAGCGGTACCGCTGGTGGTAATCCAGGGGTGGAGAGTTATTGTGCGTTGGACTATACTTCCGCTTCACGATACCGTCTAAAAAGAGAGGATCACAACCAAATATTCCAATTCTTTGGAAATATTTTGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTTCCTACACGGAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCACCTCCTACACGGAGGTGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //