Array 1 153473-155672 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRPM01000003.1 Lachnospira eligens strain AF35-21 AF35-21.Scaf3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 153473 30 100.0 35 .............................. TATATTAAACACTCCTTTCACAACAAAATTGTCAA 153538 30 100.0 34 .............................. GAAGAAAGAAACCGGGGCATGGCAGCGGGAATGA 153602 30 100.0 36 .............................. GCCCTTTGATATAATTATTTGTTAAGATAGCCCTAC 153668 30 100.0 35 .............................. GAAGAATATGACTTGTTATTTGTTCATATGATGAC 153733 30 100.0 35 .............................. ATATACTTTTGGGGTAGGTTCATATTGTGAAAACG 153798 30 100.0 37 .............................. ATAAGCAAGTCTTTTTTTATTGCAATATTCAGGATTG 153865 30 100.0 35 .............................. GCGCTTGGATATCTTAACTGGTTTTTCCCGGTTAA 153930 30 100.0 36 .............................. ACAATTTTCTAACAGATGCTTGTGTCCCTGGATCAG 153996 30 100.0 37 .............................. ACACTGCGCCAGCTTGAAGCAATAGCAGCTGCACTGT 154063 30 100.0 36 .............................. AAATACCATTGATGAACGATTTTCCGTTCTGTCGTC 154129 30 100.0 37 .............................. ACCTTTTGAACTGTTGACAGTCTGTAGGTGGAATCTG 154196 30 100.0 37 .............................. GTTCTATTGCAAAAAGAATATGTAAGTTATTGTCACA 154263 30 100.0 36 .............................. AGCTATCTTTATCTAACAATTTATACAATAACGGAC 154329 30 100.0 35 .............................. GTACCATCGTTAATAAGATATGGATTTCTTGCAGA 154394 30 100.0 36 .............................. GACGACACTTCAGGTTGAAGAATGGCTGAAAACACA 154460 30 100.0 36 .............................. ACCGTAGAGAAGTTGCTTAGCAAGGCGGAAAAAAGC 154526 30 100.0 36 .............................. TTCCTGTCATTGTAGGTGTTTCAGGTGGCATTCTAG 154592 30 100.0 34 .............................. AAATATAAAAGCGGCGCAGCAATCACAATACACA 154656 30 100.0 35 .............................. CTTGAAGCAGCGCGATTTGTTGCGATCCGCGGACA 154721 30 100.0 35 .............................. TTGAGAGGCACTCCTTTTTTATTAGAGCCATTTCA 154786 30 100.0 36 .............................. AAGATTGCAACCAGTCCGGCAAATATGAATATATCC 154852 30 100.0 37 .............................. ACAGTACAGATTTTGCAAACGGTGCAGACGGTGCCAG 154919 30 100.0 37 .............................. GTGCTTATAGTGTTTGTAATGCCGACTATGCTTTTGT 154986 30 100.0 35 .............................. AAAGAACACTGGTCAACATCTCCACGCTTCACTCT 155051 30 100.0 37 .............................. ATAATCAAGGGTATATAAACAAAAAGCGGGCTTGTAC 155118 30 100.0 37 .............................. CAAAATATTTGCCGTGTGCGTAATTAACACAATAACC 155185 30 100.0 35 .............................. GACACATGCACAGGAGAAATGAAAGAACCTTGCTT 155250 30 100.0 35 .............................. TTGAAAAGACTGGGGAAGATATAACATTTTCTATC 155315 30 100.0 35 .............................. GCTTCAATCTTAACTGAGGGTACTGCTGTAAGATG 155380 30 96.7 35 A............................. TATAGCGTAATAGGTCTTATTACCATCAGCCTTAA 155445 30 96.7 35 A............................. AGTGTTGCTCATGCTTCGGAATTGGTCGGGGGTGA 155510 30 96.7 36 A............................. CAAGAAACGCTGCGATCCTGAAGAAACTTGCAGAGA 155576 30 100.0 37 .............................. ACTTGGAAGCAACAAGAAAAGACTGCTGAAAGTCAAA 155643 30 96.7 0 .....................A........ | ========== ====== ====== ====== ============================== ===================================== ================== 34 30 99.6 36 GAATTAATAGATACATAGTGGGATGTAAAT # Left flank : AAAGCATTTAATAGGTGAGAAAGAATATGAAGGGTTTAGAATATGGTGGTAGTATATGTATATTGTACTTGTATATGATGTTAGTAAAGATGAAAATGGGCAAAAGAGATGGTCACATATTTTCAAAATCTGCAAAAAGTATCTGACGCATATTCAGAATTCTGTCTTTGAAGGAGAAATATCAACAGTTCAATTAGAAAAATTACGGGGTGAGTTGAAACCACATGTTAATACTAATCTGGATTCAGTCATTTTATTCAAAAGCAGGAGTGAAAAATGGCTGAATAAAGAATTTTGGGGTAAGGAAGATGATTTGACGAGTTTCATAATTTGATTGTCGACCAGAAATAGTGTAAAATATGCACAGAGTCGACAATGGCGATATTGCTATGCTTCTGGCATATTAAGGGCATAAAGTATTAGTAATCTGTTGGCGGATTTAAAGGGTAGACAGAATAACGCTTCAGAGTTGAGAAACAGAGAGGCTTTAATAATTACGG # Right flank : TCTGCGAATAGGTGTAATTTCAAGAGAAATGTTTTTCATCGTTATTCTGTTGCACTGGTGCAACTTTGAATTATTCTACTATGCACAAATCTTCTGCAAGCATATCTGCCTAAGATTTTGCTCTTGCATAATTCTTCATTTCTAAATCCTCACTTTCTTAAAATTGGGTATAAAAATACCACTTGACCGGTGGTATTTTACTAATCAATATGCTTTATTTCCTTAATGGATCGATTTTCTTTAAGTACTCCTGCTTCTTTGAGTATCTTTTCAAAATCTTTATCATATCTCTCTTTGTCTTCCTTTGTTCTTTTAACAATTTCTCCTGTTGTTTAAAATAATGGTATCCCCTTTTTTAACTCTTCACTCATTATATTCCTCCAACAAGATATAATATTTATCATCAACCTTTCTTTATTAAGTACTTTGAATCTCTGATTTGTCTTATATAAAACTTCCTGCTCCTGTGCATTAACAGAAGAAATATCTCTACCATTATA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGATACATAGTGGGATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 157203-158807 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRPM01000003.1 Lachnospira eligens strain AF35-21 AF35-21.Scaf3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 157203 30 100.0 34 .............................. GTTGTTGGGGGAAGACCCAGCAATATATACATCT 157267 30 100.0 35 .............................. ACGGATGTGACCTCTGAAATACTCGTACAGCTTAG 157332 30 100.0 35 .............................. GAAGAGAGCCGTAAAGAATACTAACGCTGCTTTAT 157397 30 100.0 36 .............................. ATACGATTGTTTTTATAGTTTCTTGCGTTCATCAAT 157463 30 100.0 36 .............................. ATATTTATATTAATGATTATCACTTTAACACTACTA 157529 30 100.0 35 .............................. AAAAAAGATGCAGCCATTGTTGAACCTCTCACGGA 157594 30 100.0 36 .............................. CCATATTATTATTAGATGGAGCACCCTCACCCTGCG 157660 30 100.0 36 .............................. ATATCTGCATATGCACTATGATATGTATGTTCTCTG 157726 30 100.0 36 .............................. TTTGTCTTTCTGGGAATATTTGCCTCCGGGCTGTTT 157792 30 100.0 36 .............................. GCCCTGTAAGCATATCCGTTATTATCTGCTGTCTTT 157858 30 100.0 36 .............................. TTCCTATCATGGTGGTAGTGAGAAATTTTTAAGGAG 157924 30 100.0 34 .............................. ACATTCACATTAGATTATGGTTATCTGTTTGGTT 157988 30 100.0 36 .............................. ATCTTGGAAGTAAATAATTCCTGGCTCTGCTCCTGA 158054 30 100.0 38 .............................. CCATAACATTACTACAGGATTTAGCAATTGGGGAGATA 158122 30 100.0 35 .............................. GTTATTAAACAGCCCGCACAATCAAAATCCGGGTA 158187 30 100.0 35 .............................. AAATTAAAAGGTTTATTTAATTTTCTGTCGAAATA 158252 30 100.0 36 .............................. AGAATTATTGGTAATAACCAGCATAAGGGAAAGACA 158318 30 100.0 35 .............................. TTCTAAAGCAATTATAGCATGTAGAGGTGCAACAA 158383 30 100.0 37 .............................. GCTTACAGGCAGATTCACAGGAACAGATAATGTAACC 158450 30 100.0 36 .............................. TTCTTTAACTAACGCCTAAGCGTTGGTTGTTTATGG 158516 30 100.0 35 .............................. TTGCTGGCAAGGATTGTTCGCATTGAAAGAAGATA 158581 30 100.0 35 .............................. AAGCATAAGAGATTAACAAAAGAGTTGCACAAAAG 158646 30 100.0 36 .............................. GAGGATAAACTTCTTGATATGGCACAGAAGGCAGCA 158712 30 100.0 36 .............................. GAACTGCGGATATAAGATGTTCTTCCAGCAAGCAGG 158778 30 90.0 0 .....................A..A....A | ========== ====== ====== ====== ============================== ====================================== ================== 25 30 99.6 36 GAATTAATAGTTACATAGTGGGATGTAAAT # Left flank : AGAAAATATAGTAGTAAATAGACAGAACAATGATATATTTAAAAGATAAAATTAAAAGAATATGACTTACAAATTAGACAATCTGAGGAATTGAAAATATTTTTGAGATGAAAAAGATTTATTTAATATGGAATCTGATAGCAAAGTTTTGAATGCCTTAAACAATATAAAAACATTTTAGACGTACTTATGAAATTATTCTCAAGGGTAAAAATATCGCTGTTTTTACAATTAGCAATGGCATTGATTTGACATCGACTTATGTATTTTGTGAATTGTGGGAATAGCAAGAAAAGTTATAAGTGAAAAATGATAAAGATATATTTGAAATTGCTTGTCGACCTATTATAGTGTAAAATATAAGCAAGGTCGACAAAGGCTTAATTTATGCGTTTAATTTGAATTTATTGAAAATGACATTAGTAATATATGTGAGATTTTATTAGAACGACAAATAACAGCTTTAGATTAGAGGTTTAAAGATGTATATAAAATTACGG # Right flank : ATACGATACAATTATATGTTTGATTTTCTTGAAGATAGGATATGTTATTAAACAAAATAGTGGCTTTAAATTATGCGCTTTTGACAGGATCAATATGATTGATAAATGCAATCCCCTCCACGCAACCAATTCCACCACAATTCCCACTTTTCTGACAACTACAATTGGTGGAATCCACATTTTACATGGGCTATAATACATACATAACAACAGAAAGGACTGACATTATGCTACAGGAAAATCTTATAATGCTGAGGTCGCTTGCGGGGAAGACTCAGGAGGATATCGCAGAGGTTATTGGAATATCGAGGCAGGCGTATGCCAAATGGGAGCGTGGTGAAACAATTCCTGATATTGAAAAATGCGGCAGACTTGCAGAATTTTATGGCGTGACGATGGATTCCTTAATAAAGGACGATGTGCAGCTTGAAGGGCAGAAGATGGCACCAGCACCGAAAGGCAAACACATGTGGGGCGTTGTCACAGTGAATGACCGCGGT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGTTACATAGTGGGATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //