Array 1 99554-100373 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDHE01000006.1 Corynebacterium amycolatum strain LK23 contig06, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 99554 28 100.0 33 ............................ CGACATGGACGCTGTCCGTCGTGAGCTGGAAGC 99615 28 100.0 33 ............................ GCAAGCAGAGACGACAGGGTGTAGGCGCTGTCC 99676 28 100.0 33 ............................ GTCATGGCGTATCTGCACCGCCTCTTTTTCCGT 99737 28 100.0 33 ............................ GTCCATGTTTGGCAGCACCACGGTGAGCCCCCG 99798 28 100.0 33 ............................ GCCACCGATAAGGCAAGTCACCATTAAGAAACG 99859 28 100.0 33 ............................ CACCAGGCTCCGACGCGGGAACCCACTCCCCGC 99920 28 100.0 33 ............................ CGGCACAGGCTCAACCGAAGCCGGATTGTCATA 99981 28 100.0 33 ............................ GGGCATGACGAAGGCGGAGCTTATCGCCGCCGT 100042 28 100.0 33 ............................ CAGAACCGCGTTGGGGTGGACTACCCCGTGTGA 100103 28 100.0 33 ............................ GACTAGTTACTTAGCAATAAACATGGCAAGCAA 100164 28 100.0 32 ............................ AAGTGTTCCAATCACCACCCACAACCAAGTAA 100224 28 92.9 33 .G...T...................... CGGCATCAGGCTGCTTGAGGCTGGCTTGTGGGA 100285 28 96.4 33 ........................C... TCATATCCGCCAGCGACACAGTACCGTCCGTCG 100346 28 89.3 0 ...G..........GA............ | ========== ====== ====== ====== ============================ ================================= ================== 14 28 98.5 33 GTTTTCCCCGCGTGAGCGGGGATGTTCC # Left flank : AAACGAGGAATTCGGCGAAGTTATCGAATTGTGGGATTACAGCCGCGGCACGATTAAAGGTGGTACAAACTACTCCTCCGGAGAACCACCATGGTGACAATAGTTTTGACGAGCTGTCCTGCCGGATTGCGGGGTCATTTAACTCGATGGCTTGAGGAAATCGCCCCAGGTGTATTTGTTGGGAAAGTTAACTCTCGTCTCCGTGACATCTTGTGGGGCCTGGTCATCGAAATGGTCGGCAGTGGTCGTGCCATAATGGTTTATCCGGATCGGAATGCCGAACAAGGGTATGCCTACAAGGTGCATCGCCACGACTGGGAGGTCGTCGATGTCGAGGGGTTGTCGCTGATCCGGCGTCCGTTCAAAAACAGGACTAAAGGTGATGTCGGATTAAAGCCGGGATGGTCAAATCCGGCTAAACGACGTCGTGCCCGACATGCTCGTCGTTCGGAGTGATATAAAATCTTACACTGGGAACCGAATTTTGCTGGTGAAGAAGT # Right flank : CGGTTTGATTATGAGGGGGATAGTATCCCCGCGTAAACACTCAGGAGGGTAAACGCATGACGAAGTACTGGGATCACAACGGCAGTATCTACAAAGACGACGGCCAGGAAGATTGGTGCGTTTATAACCCGTCTTTGCGTGATTGGGAGCGCACCCCGCGTGCTAAGGAAGCCTACGACAAGGCAGGCCAAGCCCCGTTCGACCCCATCACCGAGCAGCAGGCACTCGTCGATATTGCAGAGCAGCAGGAACGCTACAACAAAAAGATTCAGGACAAAATCAAGGATCTGCGCGCGAAAATGAAGGCTGTCGGTGCGCAGGCCAGACAGGCTGCTGAACAGCTGTACCCAACCTTTGCCGAGCAATCTGCCGCATACCGCGAGGGCGCGCAGGCCTACAACGAGGGCAAATCTTGGCGCGATAACCCGCGTGCCCCCGAGTCAGGTCTAGCCGCCCCGTGGCGCATGGGGTTCAATACCCGCAAGCAGCAGGTAGCGGAG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGTGAGCGGGGATGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //