Array 1 458-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBF01000195.1 Streptomyces zinciresistens K42 contig00195, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 457 30 96.7 31 .............................T TTCCGCAAGCGGCGCCGCGACGCCGGGAAGA 396 30 100.0 31 .............................. TATCGGGGGCAGCATGGGACCCACTGTGCAA 335 30 96.7 31 .............................A ACCTGCGGCAACCTCGGGGGCCGCGCGCGCA 274 30 100.0 31 .............................. TCGACGTCGCCGTGGCCCCCGTCGCCGTGGA 213 30 96.7 31 .............................T CCTGCCCCTCCGTCAGGGGGTGGTCGACGAT 152 30 100.0 31 .............................. TACCCGCTCGGCGAGATCGGCGGCAGCCACA 91 30 96.7 29 .............................C GCGATGCCCTGGCGTCCCTTGGCGTCGGT 32 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== =============================== ================== 8 30 97.9 31 CTGCTCCCCGCGCTCGCGGGGATGGACCCG # Left flank : GGCAGGCCCTCAACACGCCCTCCGACTCTCCGTTTTGGTGTGCGTGGGTGCGTGGGTGCGTGGGTGCGTGGGTGCGCGGGTGCGCGGGTGGTCCGAGCTGGGCAGGCGCGGTGGCTCCAGGGCTTGCCGATGCTCGTGGGCGGGGGTGAACGCCCCCGAACTGCAACCCTCGGGGGTGCGGGGCGCTGGCCGTGGTGAGTCGGTGAGTCGGTGTGTCGGCTTTGGGGGGCTGGGGGGCTGGGGGGGCCGGGGGCAGTGGGTCCCCTCTCTGGTACTCGTGCCGGTCGTGCCGGTCGTACCGGTCGTACCGGCGGGTTGACCGTCTGGAAGCGGGTGCGGATCAGGGCGGGTAGGTTCGGGTAGGCGGTGCCCGTCTCGGCCGTAGGGTGTCTGCTGGGCTACTGCATGTCGACCTGAGGGTGGAAATACGCGTTTTGCGCCTTTCTCTGAAGTTGGTTCCGCGCGGCCTGCGTCCACACAATGACTGCAGGTCAAGCAGA # Right flank : TCC # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCTCGCGGGGATGGACCCG # Alternate repeat : TCTGCTCCCCGCGCTCGCGGGGATGGACCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-14.10,-14.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 18620-18869 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBF01000110.1 Streptomyces zinciresistens K42 contig00110, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ==================================== ================== 18620 25 100.0 36 ......................... GTCGGGACGCAGAGCTGACCGGCCGTCATCTCCCGG 18681 25 100.0 36 ......................... CCGATCTGGCGTTGACTTTTGGCACGCTGTTGAGTT 18742 25 92.0 30 ...A...G................. CCGGCCGGTCCAGCGGATCGTGACGGTGAC 18797 25 96.0 22 ......................T.. CCGCCGCGTCGAACCGGCGTAC 18844 25 84.0 0 ...CA...........G.......C | A [18862] ========== ====== ====== ====== ========================= ==================================== ================== 5 25 94.4 31 GGCGGCCTCGCGCGCGTGAGGCCCG # Left flank : AGTTCGGGCGCGCGCCGCCCCACACCGAGGCGCTCGCTGATCCGCCTCCTCGCCATGGCGGTGGTCGCCGTCGTCGGCGGTCTGGGCGGTGCCCTGATCGTCGGCCCCGTCCTGGACGCCCTGCCGGGCAGCATCGCCGCGCTCTGGGGCGCCGGCGCGCTGATCGTCTTCGCGGTCGGCGCGGCCACCCTCGCCTTCCAGGCCCTCTTCGGCCTGGCCGGCATCGGCCTGGCGATCCTGATCGTGGTGATCCTCGGCAACCCGAGCGCGGGCGGCGCCCTGCCGCCGCCGCTGCTCCCGCCGTTCTGGAAGGACATCGGCCCGGCCCTGCCCCCCGGCGCGGGAACGTGGGCGACCCGGTCGATCGCCTACTTCAGCGGCAACGACACCACCGGCGCCCTTCTGGTCCTCTCCGCCTGGGCGGCGGGCGGCATCGCCGTCACGCTCCTGGCGACGGCCCTGCGCGGCAGCGAGCGCGCGGCACCGCCGAAGACCGGGCG # Right flank : CGCCCCCCGGTAAGGAGGGACGGGGCCTGCGCGGAGCGCGTCAGCCGATCTGGGTGCCGGTCGCCTGGAGCGCCTCGGTCACCGGCTGGAAGAAGGTCTCCCCGCCGGAGGTGCAGTCACCGCTGCCGCCGGAGGTCAGTCCGACCGCCTTGTCGCCGGAGAACAGCGAACCGCCGCTGTCGCCGGGCTCGGCGCAGACGTCGGTCTGGATCAGCCCGTTGACGATGTCGCCGTTGCCGTAGTTCACGGTGGCGTCGAGGCCGGTGACCTTGCCGTCGCGGACCTGCGTGGTCGAACCGCTGCGGGTCACCTGCATGCCGACGGTGGCGTCCGCGGCGCCGCTGATGGCCTGCGTGGAGCCGTTGTAGAGGTTGACCGCGCTCGGACGGTCCACCTCGGCGGTGTACTTGACCAGGCCGTAGTCGTTGTCCGGGAAGCTGGAGGTCTCGTTGGTGCCGATCTCCTGGCCGCTGGAGTCCGACCACGTCGTGATGGCCGCG # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.19, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCGGCCTCGCGCGCGTGAGGCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [18.3-21.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 19164-18891 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBF01000064.1 Streptomyces zinciresistens K42 contig00064, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 19163 29 100.0 32 ............................. GCTTCTTCACGGGGCGCCGACTGCTGGCGACT 19102 29 100.0 32 ............................. CCGTCAGGACTTCCTGCGACGGCGGGAGGCCG 19041 29 100.0 32 ............................. AGCCCTCACCCGAGGACTACGCCAACGACCTC 18980 29 100.0 32 ............................. TCGGCGAACCCAGTGCAAATGATCACGGCCAG 18919 29 93.1 0 ..................A.....G.... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 98.6 32 CTGCTCCCCGCGCTCGCGGGGATGAACCC # Left flank : CACCTTCCGCACGCACGACCACACATGGCACCCCGTCGACCACGAGGGCCTCACCCTCATCCTCCGCCCGTCCGACCGCCCCGCCGACAACCCGACTCCGACATCACCCCAGCCTTCGAAGGGCTGGAGCAAGGCGTCCAAGCGGCGCCGCTTCGGGAACCGGACGCAGTAGCCTCGCCGAGGACGGGCCGGCCGCTCAACCGGCGCGGTCACAGGTGGCCGCCACGGCTCGGCCGACTCGGGGACGTCACGTACTCCCCGGCCGGCCCCGGGCGTTGTTCGTTCTCGTCCTGCCCGCCAGAAACACCCACGCTCGTGGACCGGGCGGGACAGGGGCCGCCAGTGGATCCGAACTCCCTCCGTAGTAAGCCGGGATGGATCCCCGTAGCCTGTTTGCTGGGCGGCCTCGGATTGACTCGCCCCATGTGCTCCTTATGTTCCTTTCTCTCATCCTTGCCGAAACAAGCACTGCTCATTGATGAAACCGCAGCGCAAAAAGC # Right flank : GCGCCGATCGGAGTGGATTCACTTTCCGGACACCGGGCCGTACCACTGCATGGCTTGGCCGGTGATCGCGGCGATACATTCGAAGTCGTGGTCGCGGTGCAGGAGGGTCAGCCCCTGGAGTTCCGCTGTGGCGGCGACGACGAGGTCGACAGCTCCCGCGCTGCGGTGCTGACCGCGTTGGGTCAGCAGCTCCTGAACCCGCCAGGCGCGGTCGTACGCGCGGTCGTCGACGGGCACCCAGCCGAACAGCAGGCGCATGTCCTCGATGCCGCGCGCACGGTCCGCAGCGGATCGGGCGCTGTAGAAGAACTCCAGCTCGGTGACAGGGCAGGTCGCGATGAGCCCTGCTGCGGCGGCCTGATCCCATCCGTACTGTTCGGCGTCGTCGCGGAAGAATCGGGCGAGCGCACTGGTGTCGATCAGGAACTGTGCCGCGCTCACCGCCGATAGTCCCTTTTCTCCTCGAAAACATTCAGATCGAACGCGCCCTCGCCCGCCGC # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCTCGCGGGGATGAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 31443-29091 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBF01000064.1 Streptomyces zinciresistens K42 contig00064, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 31442 30 96.7 31 .............................G GCGGCCTGGGCAGGGTCAGGGCCTCATGCAG 31381 30 96.7 32 .............................G AGCTGGTGGCCTCTATCGTGGAGATGGAGTGG 31319 30 96.7 32 .............................T GGCCGAGCCTCATTCGGTGGGGGTGAGAAGTG 31257 30 93.3 31 ............................TG CGGGCGACCGCGCGGGGCGACCGGGTGGTGC 31196 30 96.7 31 .............................A CGGCGGCGGCCGGGCCGGAGCGTGTCCGGCT 31135 30 96.7 31 .............................A GCTTCTTCGCGGCCCTGAGATTGTTCATGGG 31074 30 96.7 31 .............................G AGCCGGCCGCCGCCGACCACGTCGCCAAGAT 31013 30 100.0 31 .............................. GGATCGGCTACGCCGAGTCCCCGATCGCGGA 30952 30 100.0 31 .............................. ACCTCGCCCCAGGGATGCGGCAGGCTGGAGG 30891 30 96.7 33 ............................G. CCGGGTCACGGACTTGGCGGTGCCGGGCACCCG 30828 30 93.3 31 ............................GT CTTGTCGTGGTTCCTGAAGGAGTTCCAGGAC 30767 30 96.7 31 .............................A GCAGCGCGGTGCCGCCGACCTTGGTCAGCCG 30706 30 96.7 31 .............................A CCCTGTGGGGCGAGTCCCCTTGGGCGGGCGT 30645 30 100.0 31 .............................. AGGCCGCGCTGAAGGCCGAGCCGATCTCCAA 30584 30 96.7 31 .............................T GGCCGTTCGCGTCGGTGTCCAGCTCGATGTC 30523 30 100.0 31 .............................. GGTCGTGGAAGCTCCCCGCCAAGCACTGCGG 30462 30 96.7 31 .............................G AAACGAGCCCCGGCGGTGCGGGAACACCAAC 30401 30 100.0 32 .............................. CCAACCCATCACAGAAAGAAGAGGTCACCGTG 30339 30 96.7 31 .............................G CGACGGCGGCGCAGGTGCGCACCGCGCTGGC 30278 30 100.0 31 .............................. GGTGAGGCGGAGAGGCGCCTCGATCAGGTGC 30217 30 93.3 32 ...T.........................G TTCAAGGTCTACAACGTTCACGGGTAAAAAGA 30155 30 96.7 31 .............................A CGAGCAGGTCGACCACGCTGGACGCGAACGG 30094 30 96.7 31 .............................G GGCCAATTCCGGGACAGCACTGACCGACCAG 30033 30 96.7 31 .............................G TGTACGCCGGCGTCCGCTACGCGATGAGCCG 29972 30 96.7 31 .....A........................ ACCTGGAAATCCAACTGGAGTAGGGGGCGCC 29911 30 100.0 31 .............................. AAACCCGCAAGGTGAAGGTTAAGGTCAAGGG 29850 30 100.0 31 .............................. ACCGGCCAGCCCGCCGAGACGCAGCAGGCGA 29789 30 93.3 31 .................A...........G CGACCGGGCCAAGGCCCTCGCCTACGAGGAG 29728 30 96.7 31 .............................A AGACCGGCGCCACCGAAGCCCACCTGCACCA 29667 30 96.7 29 .............................G TGCTCGACATGTCGGACGAGGCCGCCGAA 29608 30 96.7 31 .............................G TGGGCACGGCCATCGTCGGCACTGCCCAGCT 29547 30 100.0 31 .............................. GGCCGATCCAGGGCGAGGACCTGGAGCGGGA 29486 30 96.7 31 .............................T CCCTCACCTTGAGCTTGAGCCCGGACACGTT 29425 30 100.0 31 .............................. ACCCGCACGTATCGACTCCGGAGGAACGGTG 29364 30 96.7 31 .............................G GCCCGGGGGCCTAAGCCCGGACCGCTTCTGA 29303 30 100.0 31 .............................. ACGCCTCGAACACCGGCCAGTACTGGGTGAG 29242 30 100.0 31 .............................. GGTACCGCTTCTACGTGAAGATCGGCCCCGA 29181 30 93.3 31 .................A...........G TTCTGCCGGTACGGGGCGTGCGCCCCGTTTC 29120 30 96.7 0 .............................G | ========== ====== ====== ====== ============================== ================================= ================== 39 30 97.3 31 CTGCTCCCCGCGCTCGCGGGGATGGACCCC # Left flank : CACACCGCAGATGCAACAGCG # Right flank : AGGCGATCACCAACGCCAGTGAGGCGATGGCCTGCTCCCCGCGCGAGCGGACGGACTTCCTCCGTCGGTCAGCGCACCGCGGCGTCTACGGCTTGTTTCGAATCTGAGCGATTCTGCCACTTGCTGAGGGTGTTTGATCACTTCGTACTATTGTGCCCCGTTCGTGTTCCCCTCCCTGTTGAATATGCGCCGTGCGTGGCGATGACAGCGGGCCGACGCCCCTTGGGGACCGGTTGACAGGTGCGGCCCGGACCGTGTGGGCGAAGCACGATCGGGATACGGCGAAGTGGCTGCCGCTGTGGCGGCACATGGCGGACAGTGCCGCCGTCGCCGGGCTGCTCTGGGATCACTGGCTGCCGCGCAACGTGCGGGAGATGCTGGCTGGGCCGCTGCCCGGGGGAGAGGACGACGGGCGGCGGTTGTGCGTGTGGTTGGCCGGCACGCATGACATCGGGAAGGCGACACCCGCGTTCGCGTGCCAGGTGGACGAGCTGGCCGGT # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCTCGCGGGGATGGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [30.0-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //