Array 1 8331-2864 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDLQ01000123.1 Carboxydocella sp. ULO1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 8330 30 100.0 38 .............................. TGTTACCACCTCCGGCAAGGCCTTAGCCTGTAGCTGGG 8262 30 100.0 36 .............................. ATGATTTTGATTTTCTTGAATTCTGCACCTTTATCG 8196 30 100.0 35 .............................. ATCGTTACGCCATACTCATCTTTATCTTCTCGCCT 8131 30 100.0 35 .............................. ACTATCGGATCCATCCAATACCCCCAATCCTAGCT 8066 30 100.0 36 .............................. AAAGTTAAAAATGTATCTTCTGCTATACTTTTCTGA 8000 30 100.0 36 .............................. TTTTTCTTCCCTGTTAAACTAATGTTTAACCCTTTC 7934 30 100.0 36 .............................. TATGGATGGCTATGTTGATCAACAAAATGAGATCTT 7868 30 100.0 37 .............................. AACAGTATGGCGACTTCATTGAAGTTTCCGACAAACT 7801 30 100.0 35 .............................. GCGTTCCCGGGTGTTTGCATGTCCAATTCCTTCAG 7736 30 100.0 36 .............................. AGGAATTAAAAGGCAAGCATTTATTGACCAGAATAC 7670 30 100.0 36 .............................. GCCTGTGACACAAATGGCCTTGCTTTTTTCTTCCGA 7604 30 100.0 36 .............................. TTGACCGCTTGTAGCTTACACTGCTTTTCAGTTGCT 7538 30 100.0 37 .............................. TTTTTAGGCCTGTTTTCTTCTTGCAGGTATAATTACA 7471 30 100.0 36 .............................. ATATAAAACTTACCCCGTCGCATCTCCATAACGTAC 7405 30 100.0 36 .............................. TAGCAGCTATCTTGCCTATAGGTACTTTGAAATCAT 7339 30 100.0 37 .............................. GGAAAAACTTTAACTCTGTGTCCGTTGCACCTTTCGC 7272 30 100.0 36 .............................. GGCTATGCGAAAACTAACCGGGTCGGCAGCCAAAAA 7206 30 100.0 36 .............................. TTGATAAAATTAGTTATCCTGGTAATCATTTTAAAA 7140 30 100.0 36 .............................. ATATAAATAACAGATTCATCAAAAAAATTGCTAACA 7074 30 100.0 36 .............................. ATGTCTGCCTCCCTCATGTCTGCCTTCCTCAGGTCA 7008 30 100.0 36 .............................. GGGTTCGGAGTATGTGCGATTAGTTTAGCTGTTGGC 6942 30 100.0 37 .............................. GTATTATTTCGGCAAACGGGGCATGTCTAATGAACTG 6875 30 100.0 35 .............................. TTGTGTTGCATAAGGGGGAGGATAGGACATGGACG 6810 30 100.0 37 .............................. CGTTGCCAGCCTCGTGTTCTTCCGCCAGCTTTTGCAG 6743 30 100.0 38 .............................. GGTGGTAGAGCAACTGCACAAAAATTTTACGGTCCACC 6675 30 100.0 36 .............................. ATGGTACAGGGCATCAAACCCACATGAGGTAGCGGC 6609 30 100.0 38 .............................. GATTCACCCTGTATCGCAATGTCTTGTCCCAAGTGTTT 6541 30 100.0 35 .............................. TCAGATCAGAACTGGCCAAAACTCTCAATGCCTTC 6476 30 100.0 36 .............................. GGAAATCTATGTCTTTGGGTGGCTGCCCGAGTAGGG 6410 30 100.0 36 .............................. TAATATATCGGGCCCTGTGTGTGTGTGGGCCCAGGG 6344 30 100.0 36 .............................. GAATTTGAGTTGTGCAAGTATTTATGTAAGGTTGAT 6278 30 100.0 39 .............................. AGGGTTAGCGGCCATTTTGCTTATGCAACAAAATTTCAT 6209 30 100.0 36 .............................. GTCTTTCCAGTAAAGGCATGTTGTTATCTTCCAAAG 6143 30 100.0 37 .............................. TATACTCTCGTGTAACAGATGTCATAAGATTCAATAA 6076 30 100.0 37 .............................. CGACAGAGGATGAGTTGGAAGAAAGCTGCCGGAACTT 6009 30 100.0 37 .............................. ACGAAACCGTATACACATGTCCGGAGTGCAAAATAAG 5942 30 100.0 36 .............................. AAAGCTCAGAAAAGTGAAAACAAACCGAACTCGCCA 5876 30 100.0 36 .............................. CCTTCAATAGTCGTGTGTCCTAATTCGCTAAAGCTG 5810 30 100.0 36 .............................. CTTGCTAATGCTGGTACTGCACTGGGTGCAGTAGTA 5744 30 100.0 36 .............................. GGAACTTGGCGCTATCTTGTAAGTGTTACTGGCAAT 5678 30 100.0 35 .............................. TTCTTTCATAGTAATCTACATGCATATCGCCGTTG 5613 30 100.0 37 .............................. TATAAATTCTATAAGGAGGAGGTTAGTAGATGATAAC 5546 30 100.0 36 .............................. GGCACTTGCTTATTGCGTTATCCACCTGAAACAAGA 5480 30 100.0 35 .............................. TTAGAAGATGTACTTAAAACCGCCCCCTCTAAAGG 5415 30 100.0 36 .............................. TTAAAAGCGGTTGAAATGGTATTTAAACTGGTTCAC 5349 30 100.0 38 .............................. GTCTCTTTATATCGTTCACTCTATACCCCCCTTTATTT 5281 30 100.0 35 .............................. TTTTGCCGATGGAGGCAGACCGCAACGGTATGACG 5216 30 100.0 35 .............................. AGTCCGGAAACGTGCGGCGGAAGACGATAATGCGG 5151 30 100.0 37 .............................. GAGCAGGAGCCAGGTTTGGCAATGTGTCCAGAACCTG 5084 30 100.0 37 .............................. TCTGCCAAACTGCGGGCAGAGTATGAGACCCAGAAGG 5017 30 100.0 36 .............................. GCCTGCAGAAATGCAATATCTCCCGCAGGTTCATCG 4951 30 100.0 37 .............................. CTGGGTGGAGTTAGTTGCTTGCTCATGTTCAATCCCT 4884 30 100.0 37 .............................. GCTTATCCTTGCCTGCGACATCGGCTACCGTTAGCGC 4817 30 100.0 37 .............................. CGCATCGCCGAAGAAATGGACAAGCTTAGGCAAATAA 4750 30 100.0 38 .............................. CTTAGAATTAGACACCTTTGGCGGATTTGGCTCTATTT 4682 30 100.0 36 .............................. TGGAATTTGTCCAGCCAATCAGGGACAAGGCCAAAA 4616 30 100.0 38 .............................. GAATACTCAGGCCTGTCCTCATAGTCCAGCAAAGTTTC 4548 30 100.0 37 .............................. CAATATATGCATGTTGCGCAAAAGGTGCTGCCTCCTG 4481 30 100.0 36 .............................. ACTAGTAAACTACTTACTACCTAAAGCTAAAAAAAT 4415 30 100.0 37 .............................. CAACATAGGCATGTTGCGCAAAAGGTGCTGCCTCCTG 4348 30 100.0 37 .............................. TCTACAAGCCCTCCTCATTTGTTCTTTTATTTTTTTC 4281 30 100.0 37 .............................. AACTTTAATTGGTCCCGTAGCATCGCGCATAATCAAA 4214 30 100.0 36 .............................. CAAACTACGGCCTGACCAGCCGCTTTTCCTCGGCCG 4148 30 100.0 36 .............................. TGTTTAAACCTCCCTTCTACACTTTGCGCAACAGCG 4082 30 100.0 36 .............................. AGTACCAGGACCCAGCAGAAGTGCAGAGGCTGATTG 4016 30 100.0 36 .............................. TATTGCATATCCTATATTCCTACTTATGTGATATGA 3950 30 100.0 38 .............................. TTAGTTTTGTAAGCATAAATTTGATTTTGATTCTTTTC 3882 30 100.0 37 .............................. TATCATAACACATTGAATAAGTTTTACCAGCACCCGG 3815 30 100.0 36 .............................. GCCTTTGGTATAACCCCACGTGCTATATAGGTCCGC 3749 30 100.0 35 .............................. TATATTGGCACAATTTCAACAAAAAAAGCAGGTCT 3684 30 100.0 35 .............................. ATCTGGTGCGAAATAAAGGGGGGTATAGAGTGAAC 3619 30 100.0 36 .............................. TAGTCCGGGAGCGCAAAACCGGGAAACGAAAAGAAA 3553 30 100.0 35 .............................. GGTTAGCCTTTTGGAAGTTTGCGCCTCGAAGGTTT 3488 30 100.0 36 .............................. GCCACTCTCGAGGAGGGACTTTATTTTCTCCCTCCA 3422 30 100.0 36 .............................. CAGGCTATGCCTGCACCTCTGCCCGGTTCCACCAGG 3356 30 100.0 37 .............................. CCGATTGCCCCTGTCTTGTTCCACATCGAGGGGTCAG 3289 30 100.0 36 .............................. TTGCAGGCACTGTTCTTTTGTCGGCAACCATACGTC 3223 30 100.0 36 .............................. CTTGTTGCGCCTTGATATCGACGATGAAGAAGTACG 3157 30 100.0 36 .............................. CTTTTAGTATAGTTGACTATCAGTGAACTTGTCAAT 3091 30 100.0 35 .............................. AGAAAAGGGGGTGGGCTATTGCACACAGACGCAGA 3026 30 100.0 36 .............................. GCTGCTTTCCTTTTGCGTTTTGCTATTGCCGCTTGC 2960 30 100.0 37 .............................. CCCTGGAAAAGGCTATAAATCTTGATGTGGGCTTATT 2893 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 83 30 100.0 36 GTTTTGAGCCTACCTATGAGGAATTGAAAC # Left flank : GGCCAGATTGAAGGCGTGTTTATAATAATGGTTTACGACGTGAATCAGAAGAGGGTCAACAAAGTGCTGAAGAAGGCTCGCCAATATTTGCACTGGGTGCAGAATTCTGTGTTGGAAGGGGAGATAACAGAGGCAAATTTCCTCAAGCTAAAAATGGAATTGGCGAAGATCATTAATGAAAAGGAGGACTCGATAATCTTTTACAATTTTCGCACGACGAAGTACTATAAAAGAGAAAGCATTGGAATAAAAAAAGGCGGGGATAATAATATTTTTTAAAATTTACTGGAGGTTGGAATGAAGAATACTAGTCGTCGACCTCCAGTAGTGCAAAAACCCCCGGGGGTCGACGACATATCTTAAATGACGGCGAAGCCAGGTATATCATGGCTTTTACAACTGCTGACTACCAACAAAACCATTGAAAAGAGAAAAGCAAGCCTAAGACAATACCAAACACAAATCCTTGTCTTGCCTGCATTCTCATAAACCCGCAATGG # Right flank : TATTTTCGCACCCATTTCCCGTATGTGTTTGGCAAGTAAAAAATCATGCATTTGGAAATTTATTTTTCCAGCACCCCAACTTACATATTTAGCAATTTATGGTTGAGTGTCTAAGCCTATAACTACTTCCGGTAAACATCAATAGATGACTATGATGAATAACTCTGTCAATTAATGCACTAGTAAGCTTTTCATCATAAAATATGCTATTCCATTTACTGAACTCAAGGTTGGTAGTAATAATCAGGCTTTTCTTCTCGTAACATTCCGAGATTACCTGAAATAATAATTGTGAACCTTCTTTTTCGAAAGGAATATAGCCCCATTCATCGCAAATGAGCAGATCTAAATTCTTAAGTTGTTTAAGAAATTTCTTCAGCTCCCCGGTTCTTTTGGTTTCCAGCAGCTGATTAACCAGAGCTGCAGTTCTGTAAAATTTAACTTTCTTAGCTCTACTACATGCCTCTACACCTATGGCTGTTGCCAAGTGTGTTTTGCCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 1 346-837 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDLQ01000002.1 Carboxydocella sp. ULO1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 346 30 100.0 36 .............................. TGGTTTTTGTAACTGTATTAAACGAGACCGATTATA 412 30 96.7 35 .............A................ TCTTCCGCCGCACTTTCCCGGACTTAAAGCGGTCG 477 30 100.0 35 .............................. TATTGAACTGGAATGATGTAATTCAGGGTATGATA 542 30 96.7 37 .............................T TTTTAATGCTGATGTTGCTTATCAACTTGTTGACAGC 609 30 100.0 36 .............................. ATATCCCTGGTCGGGCTATTTTCCAGTGGGACGTCG 675 30 100.0 38 .............................. GCAGTTGGTTGTTGATGCTATTGCAAATGCTGTTATTC 743 30 100.0 35 .............................. ATATAGCAAGAGAAGTAGCAAAGAAACATGGATAT 808 30 96.7 0 .............A................ | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 98.8 36 GTTTTGAGCCTACCTATGAGGAATTGAAAC # Left flank : AGAGATACCGTTATCCTTGCTAAACAACTGAATGATAATGTTTAAAAAAATTTATTTATAATATTTTTAGCAATTTTCATTCTGAAAAAGGGTACATCGCAAAAAGCATTCTTAGAGATTTTCCTTTCCTAATTGCCTGAAATCTGATATTATAGATTTGATCCATTGCTAGCATCCTTTCTTTACCCCCTTTAGCCTAGTCAACTAAAGGGTACAGTTTTTGAGGGGTGCCGGCAATGTTTTTTTTTCCAGTTTTGTGCTTGATTTTTAAATTTCCATTTGCTTGATTTTTATTTTACCGAAAACACTTATGAGGCGTATAGGTAATCGTCTAGCCCGCCAGGTG # Right flank : CGATTATCCTCAAAATTGTTTATCTTCCTTGCTTTCTGGATATACTGTACCCATAAACAAAATGGGAGGATAGGGCATGGAATTGGTCGCCGCATGCCTGGCAGCACTAGTAGCCGTCCTCTTTAATCGCCGGGTTCAAGCAGAGACCGGCTGGCAAATTGCAGTCAAAACCGCCCCACTAATCGAAGAATTAGCCAAAACCGGTTTCGCTAAAATCCTATCAGCCCAGGTATTACCCGTGCACCTCTACTTCGGCCTCATTGAAGCAATCTACGATGCCTGGGCCAAACCTGAGCGCCATCTTCTGCCGGCCCTGCTCAGCCTGCTCAGCCACGGCTTTTTCGGCTATCTCACTGTCAAAAGCGGCATCCTTGCTGCCCTGTTCGCCCATTTCTCCTGGAACGGTCTGATCTGGTACATGCAGAGGAGGAGGCAAAATGCGGGTAATATATTATTGTGAATTGTGTCAGGAAATCGTGGATGAATGGGAAATAGCCTTG # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : GTTTTGAGCCTACATATGAGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //