Array 1 24751-26061 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDLD01000015.1 Lactobacillus sp. OTU4228, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 24751 29 100.0 32 ............................. AACTGTAGTGACTTAGAAAACTCCAAGCACCA 24812 29 100.0 32 ............................. ATGACGACCAAGACGACTGAAAAAGAAGAGAG 24873 29 100.0 32 ............................. CAATTAAAGAAATGTCATTAGAGACTCAAGAG 24934 29 96.6 32 ............................C CTAACCTGTTATCAAATTCTAAAGGGGTATTT 24995 29 100.0 32 ............................. GATGATGATTTGCCGTTTTAGGAGGCATTCAG 25056 29 100.0 32 ............................. TCCACAAACGCCAGAAGAACAACTCCAATTAA 25117 29 100.0 32 ............................. AAAGGTTACGATCCTGTCACTATCAACTATGT 25178 29 100.0 32 ............................. CATGACTGAAGAAAAGAAACAACAAACCAGCG 25239 29 100.0 32 ............................. TAATAGAGAATTAGATAGTGCTAAGACTTTTA 25300 29 100.0 32 ............................. AAAATTAACGCTGTTAAAAAAGAAGGCAAAAG 25361 29 96.6 32 ............................C TGTAATTCTCTTCAAAACTAGGTGACGACAAA 25422 29 100.0 32 ............................. TACTAAGTCAATTTAGCGAGGGCTTTCAAGAC 25483 29 96.6 32 ............................C AAGATGGGTTATTCTAGCAGTCACTATTACAA 25544 29 100.0 32 ............................. AAACGTCTTTTTCAGCCCTTTCTCTTTTACGA 25605 29 96.6 32 ............................C AATTGAAACAAGCTGGCGCTGAAAAGATTTAC 25666 29 100.0 32 ............................. TAAACGCAACTAGCGACTTCCGCGCCGAACTT 25727 29 100.0 32 ............................. AAGTGTAAAGAGTTAAGGAACAAAAAACAAAA 25788 29 100.0 32 ............................. ATTATTTTCAGCGGTTGTTAGATTCACACTTA 25849 29 100.0 32 ............................. TAGGCAAAGACTGCAAGAAACTAGACAAGCTC 25910 29 93.1 32 .C..........................C ATTCAGATCTAATCATGACTGATCCTTGGGGA 25971 29 100.0 32 ............................. CAATTAGATTTTCTTTGCTGACTTTGCATTTA 26032 29 100.0 0 ............................. | T [26057] ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.1 32 GTGTTCTCCACGTAAGTGGAGGTGATCCT # Left flank : GATCAAAAGAAGTTTGATGAACTAGGCGAAAAGCTGTTTATGAAGGGTGTTTTGCAAAACTTTGAGCAAAAGCATGGTCCAATTAAAGGCAGAATGATGGTTACCGAAGGTAAAATTCCACCTGAAATGCTTGTTAAGTTGCAACCAGAACTGATGAAAAATCCAAAATTTATTGTAGTTGAAGGTAGCTTTGACTTTTCAAACTATATGATCGGAATGGTTATTGGCCTTAACCCTGTTCGTCCACTAGCTAATGGCTGGTTGATTCCACAATTGAACCATCCTGGTATTAAGCCTACTAAGAATTGGCAAGAATTCTTTATGGAAAAAGTTATGGAGAAAACTGATGATAATGGAAAGATCGATTTGCCACTTTATAGTTGGATTTCTGATAAGAGTGATTTAACTTTGAGCGATAAGGAAAAATAATTTGTGCTTAAAGTGAATAAAAATCTAGTTTTTGTTTTTAAAGAATGGCTTTGTTATAGGGATCTTTTAGT # Right flank : TATTCAATTATCAAGCACAACTAGTTGCTAAAGTGTTCTCCATAAATGTGAAGGTATTATTTTAAAATTTAAAAATCTTAATAGAGGGAAAAATAATGAAAAAATTATCTAGGTATGCAAAAAATCTTTGGGGTAAGAAGGCCACTCAAGATAAAACTGAATTATGGTTACCTTTAATTGCACATATGATAGATACTAAGAATGTAATTAATTGGCTTTATAATCATTGGTTGAATCAAGGACAACGTAATCTATTTCTGCAAAACATGTCAGATATAGATGTACAAAAATTAGTTAGATTTTTAGGCTATATTCATGATATTGGTAAAGCAACACCAGCTTTTCAGACGAAGGAATCTTATAATCATGATCGTGATTTAGACTATGATTTGCTTGAGCATCTATTAAGAAATGGCTTTACTAATTTAGATCAATTGCATTTGGCGAATGCTCGTAGAACACCACATGCATTGGCTGGTGAAGCTATTCTTGAAAGAGAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCTCCACGTAAGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.20,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 35554-37351 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDLD01000015.1 Lactobacillus sp. OTU4228, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 35554 28 100.0 33 ............................ CATTTTCACACTGTCTCTTTTATTTTGATAAAA 35615 28 100.0 33 ............................ TAACTCTAATTGTGTTGTAAGTGTTTTCAATAT 35676 28 100.0 33 ............................ TTACAGTCTAAATTTATATATTCAATTTGTTGA 35737 28 100.0 33 ............................ CAGACGATCACCCAAACGAAGCAGTCACCACTA 35798 28 100.0 33 ............................ TACGATTGCGATGGTCAACGATGATTCTGCTAA 35859 28 100.0 33 ............................ CACTGTTATCTAGTTGGTGGGTATCGCCAAACA 35920 28 100.0 33 ............................ CTAGGCTCATAAGTAGTAGCACCAGTGCTTTCA 35981 28 100.0 33 ............................ TAAGTGATTCTCTCCTAGTGATCTTGACACATA 36042 28 100.0 33 ............................ TTAAAACGGGTGCGACAACTCGCTCAAGAAATG 36103 28 100.0 33 ............................ TAGGAAAAATGGTTTCAAGTCTTAACGGGGTTA 36164 28 100.0 33 ............................ CGATCACGGCGTCGAAAATGGTCGAAACAGTCG 36225 28 100.0 33 ............................ TAAGTTAGTTTTATCTCACTATCATAAACGTCT 36286 28 100.0 33 ............................ TTAGCAAATCCAACTAAATTCTTACAGGAAGCT 36347 28 100.0 33 ............................ CAAATATTTCGATAAAACCGAAGCACTCAAAAA 36408 28 100.0 33 ............................ CATACTTGATATGACCAAAGCTGTGGGTCTTAT 36469 28 100.0 33 ............................ TGAACCAGCGCGTTTGCTAAATAAAAATCATTA 36530 28 100.0 33 ............................ TGAACCAGCGCGTTTGCTAAATAAAAATCATTA 36591 28 100.0 33 ............................ TACAAGTCCGAATTCTGTAAAGCCTGATCAGCA 36652 28 100.0 33 ............................ TTGTTTCATTGTAGTAAAAGTTGCAGGATTTTG 36713 28 100.0 33 ............................ TACTCAAACATTTACCCTATAAGAACACTGTAA 36774 28 100.0 33 ............................ TTTGAAGGTGCATAGCAATGACAGAAAAGAAAA 36835 28 100.0 33 ............................ TAAATCTAACGATTTAACTAAAAGCGCATTAGA 36896 28 100.0 33 ............................ TAAAACGATACTTCTGAAATTTCGTAGCCCAGC 36957 28 100.0 33 ............................ TTGATTGCTAAATTATCACAGAAAATAGCTGAC 37018 28 100.0 33 ............................ TAATAAAGAAGTGCCTGTACCACCTAAAGGTGG 37079 28 100.0 33 ............................ TAAGGCGGATTGCCGTATTTATCGGTAGTAGCA 37140 28 100.0 33 ............................ CTCTCGAGTCGTGTCGGGAGGACGTCGCAACAA 37201 28 100.0 34 ............................ TGATATATAATTATAGTTGTAAGGGATGAAAGAA 37263 28 100.0 33 ............................ TAAATTTAATAGTTCACTTGAAAACCAAGTAGG 37324 28 78.6 0 ....................A.CA.ATT | ========== ====== ====== ====== ============================ ================================== ================== 30 28 99.3 33 GTGTTCTCCACGTATGTGGAGGTGATCC # Left flank : AGTAGGAGTAAAATAATCTCTATTGGAGCGATTAAGGAAAACTTAAAAGGTGAAGAAGAACAATTTTATCGCTTGATAAAGATAAATGAGGCTATCCCAGAGAAAATTACTGAATTGACGGGATTAACTTCGAAGGTTTTAAATGAACGAGGTGTTACTTTAGAACAAGCTTTAAATGAATTTCGAAAGTTTGTTGGAAGTGAAATGATAGTTGGATACAATTTGTCATTTGACAATAATTTTTTATTGAAAGCATATTTAAGTATTGGACAAAGGGCTCTTGTAAATTCAATGAAAGATCTCATGGGTATAGTTAAAGAAAAAGATATTTTCCTAGATAATTATGACCTTGAAACTGTTTTAAAAGAATATGGGATAAAAAACGATAATAGACATAATGCATTAAGTGATGCTCGAGCCACTTTTAAATTGGCTAAAGAACTGAATAAAAAAGGTTATTTGCAAATTTAAGGATGTTGATATATCAAGGATCTTTTACT # Right flank : TTTTAATATGTCAAGTGAGCAACTAATCTACAGGATTTTGTCCTGTAGATTTTTTAATTTCTGTTTGACAATTAAAAGTTTCGAGAGTAAGATAATTAACAAATAATTAAGAGATTTTGAAAAGCAGATGAATCAATAAGATTTTATTACAGAGAATTGCTGTTAGATGAGAAACATATAAATGAACTTGATGAACATGGGCTTGGATATCAGTGTTAGCGATATTTAGCTAACAACGGCGTTGTGAACCGTTATACGTCACAAACTATTATTGTAGTTAATGAGATCTGCTGTGTGAACAGTAGATGAAGTAAAGGTGGTAACACGAAGCACTCGTCCTTTGGGATGAGTGCTTTTTTGCTTTTATTAAAAAATGAGAAGGAAGTGGGTAGAATGAGTTTAATTGAAGATGCTAAATCAGGAATTGTTTTAGATGGTGCAATGTCTGATGAATTGGAAAAACAAGGAGTAGAAACTGACAATAAGCTATGGACGGCAAC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //