Array 1 4439-3319 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJTV01000026.1 Streptomyces sp. 1-11 strain 1_11 sequence26, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================================================================================================================================================================== ================== 4438 29 100.0 32 ............................. GCGGCCACCGTCAACGGCGTCAACATCACCGG 4377 29 100.0 32 ............................. GACCAGGTGAAGATCACCGGGACGCTCGAGAC 4316 29 82.8 18 ..................A....A.AG.T GCGGTGCGCCGCCACCAA Deletion [4270] 4269 28 86.2 31 ........-....AT......C....... CTGTACGGCGCAAAGCAGACGACCGCCGGCA 4210 28 86.2 32 ......T......T..T.......-.... AAGGACTGCTACGACGACGAGCCCGACCCGCC 4150 29 100.0 32 ............................. AAGGACGGCAAGCCCGCGGCCCCGCGGGACCG 4089 28 82.8 33 .........AT..T.-.........C... CCCTGGTCATCGGCGGTGACCTGCGTGACCTGA 4028 29 93.1 32 ......T.....G................ TCGATCCGGCTGGTCGGCCAGGGCGCCGGTAA 3967 29 82.8 32 ....G....T.......A...G...G... GTGCGCTTCAATTACCGTTGCAAGCGCCACAA 3906 29 86.2 32 ..........GA..T.............G ATGCTGCAGCGTATGCGTGACCTGGCGATGAA 3845 29 96.6 32 ............T................ AACAACTCGGACGACGGCGACGACATCGAGTA 3784 29 96.6 33 ............................T AAGACCGCGGAGTCGTCGCAGGCCGAGCTGGAC 3722 29 96.6 32 ....................T........ GTCGACCGGCTGGCCCTGGTCCGGGACACCGG 3661 29 89.7 36 ..........TC..T.............. GGGCCCAGGCGCAGGCTTCACCACCGACGGCACCCT G [3635] 3595 29 89.7 216 .C......G...G................ TTCGCCCGGAACTGGGTCAGCGAGGCCTCGTTGTGCTCCCCGCGATGGAAGCCGCCGCGGTTCGGGCCCGGCTGCGGCGCCGGTCACCAGGCGGAGAGGTCGGGGCCTGGGGGCGAGCGGGCGCTGCTGCCGTACCCGGAACGAACGCATTGCGTTCATCTTCCGGGCGATAGGCGTACGCCTGGCAGGGCAGGGGCGTCTAGCCACGCGGCTGCT G,G [3569,3574] 3348 29 89.7 0 ........................CC..A | T [3343] ========== ====== ====== ====== ============================= ======================================================================================================================================================================================================================== ================== 16 29 91.2 44 GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : CGGTCTTGGTGGCAGTGTGCCGTTGAACCCGGTTCGTGCCAAACGTCCTTGACCGGCAGGCGTTTGGGCGCTAATGGGGCGTCTGGCAGGTGTTGGGGCGTGATGCTGCTGGTGTACGCCTGTGCGCCCCGCAAGCCCTCTGCCCGGCCGGCCCGGCCACGGCGCACCGTCGGGCGCATGGGGGATACCAGGGAACCGTGTCCGGGGCGTGGGGATGGTACGGACTGTCCGAACGGGGAGGACGAGGTGTTGGTGGACGGGGTTCGGTGCGAGGAGTGCTTGTACTACTGGGAGCTGGACGCGACGGCACCGGAGCGCCGACTGGTGGCGGATGACGAGCTGACCCGGCCGCTCGGGGATCCGCGGGAGGCCGGGCCAGGCACCGCGGCCTAGCGCATCCTGGCGGGGTGGGTGCCGTGGCGGGCATCCTGTCGTGAGACCAGGGTGCGGGGGAGGGCAGCGGTGAACTTCGTGTTCGAGTGCGGCTGGTGCGGCGAAGA # Right flank : GCACGTGTCGGCTTCTGGTCTGGTGTGGCCGGCGCCCTCAGTCCGCCCGGGGGCGGGTGGCACGGGTGCCGGCCGTCCCAAGACACCGCCCGGGGGCGTGTGCTCGGGTGGCAGCCTACTCCTGCTTTCGTCTGCGGTAGTAAACTCCGTACTGTTTTCTTGATGACTGTCCGGGGGTTCGCCGGACGTAGGAGGCCCAGATGATCCGCGCCGGACGCCGGCACTTGGTGCGTACCCTGGCTGACATTGCGGCGCGGCAGGGCATTGCCGTGCAGACTCTTCTCAACTCCGGTCGGCATCTGGCGGAGGGTTTTCCGGCGCCGTTGAACGCGGGCCGGACTCGGCTTTACGACGGCGAGCAGGTGGATGCGTATCTCGCGGGCCTTCCCGTTCCGCCGCTTCCGGTGACCGACGACGACGAGGACCTCCTGGATCGTCAGGAGGCCGCCGCGCTGCGCGGGATGACTCCGCAGCGGTGGGACCGCCGCAAGATGGATCCG # Questionable array : NO Score: 3.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.56, 5:0, 6:0.25, 7:-1.26, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [13-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [25.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 10395-7728 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJTV01000026.1 Streptomyces sp. 1-11 strain 1_11 sequence26, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================= ================== 10394 29 100.0 32 ............................. GCGAGCACCGGCCAGGCGGCGACGACCACGCG 10333 29 100.0 32 ............................. CGTGCCTCGGCGGCACGACCCACGCCGAGCGC 10272 29 100.0 32 ............................. TCCGCCCGGTCGTTGTGGACGATCGTGCGGCC 10211 29 100.0 32 ............................. GCCTGTGCGCGGCGGACGGCTTCCTGGATGCG 10150 29 100.0 32 ............................. AAGACCTCACCCGCGCTGCCTTCGGTCCTCGC 10089 29 100.0 32 ............................. TCGGCCTGCACCGCAAGCAGCTCAGCCAGGGT 10028 29 100.0 45 ............................. GAGTCCTTCGCCAAGATCGCCGGTACGAAGTCCGCCGAAGTCGAA 9954 29 100.0 32 ............................. CTCGGTGGAGTCCAGGCGGCGCAGCACGTTGG 9893 29 100.0 32 ............................. GTCATCGACGGAATCACGTGGGCCGAGGGCAA 9832 29 100.0 32 ............................. TAGCAAGTAGGTCACGGCGAGTCAAGTGGCCT 9771 29 100.0 32 ............................. CAAGCCGGGGTCGAGGGCTCGGAGAAAGTCAA 9710 29 100.0 32 ............................. AGGCCGGCGAGGGTCAGGTCAGGCTCGGATGT 9649 29 100.0 32 ............................. GTGCGAGCCCTCCGGGGGATAGCCGGCCACCG 9588 29 100.0 32 ............................. GGGGGTAGGCATGGCGGCCGAGAGACCCACCG 9527 29 100.0 32 ............................. ACGCCGACGAGCGTCACGGTGAACTACGGCCA 9466 29 100.0 32 ............................. TGCTGCGACTCCTTCGTGGACCCGTTGAGCTG 9405 29 100.0 32 ............................. CGTGCCGGGACGCCGCGCAGGACGCGGCGGAC 9344 29 100.0 32 ............................. GGGAGAAGGCGGAGCGCGAAGAGCGGCAGAGG 9283 29 100.0 32 ............................. GACGGCTCCAGCTGTGTGAGCAGGTCCACCAG 9222 29 100.0 32 ............................. CCGCTCCCGTGGATGCAAGCCGGCACGTACCC 9161 29 100.0 32 ............................. GACGGCTCCAGCTGTGTGAGCAGGTCGTCCAG 9100 29 100.0 32 ............................. GGGGCGAACGTCGGCGCGAACGCGTCTAACGT 9039 29 96.6 32 .........................C... CACAAGACCAGTGGAAAGGCTCTCGGCGCCAA 8978 29 100.0 32 ............................. TCCACTCGATCCTTGCAGAGTTGATTGACGCT 8917 29 100.0 32 ............................. TGCCAGATCAAGCTGGTCACCGGGTCCACGAC 8856 29 100.0 32 ............................. TTCAAGGTGACGACGAAGATGTCCGTCACGGT 8795 29 100.0 32 ............................. CCGTTCGAGGGGATGGAGCGCCCCTCGGTGTC 8734 29 100.0 33 ............................. CCCCGCCGGTGCGTTCACGGCGGGGGCTCTGGA 8672 29 100.0 32 ............................. TCCGCGCGGTCGACGGCGGCGTCGGCCAAGAG 8611 29 100.0 32 ............................. AGGTCGCTGTCCGGGTCGACGCCGTCGAACAG 8550 29 100.0 32 ............................. GACACCCAGAGTCGAGATGGACACGTTCTCGA 8489 29 100.0 33 ............................. GACGATCCGGCCCTAGATCCACGCACCTCGCGA 8427 29 100.0 32 ............................. AGCCCACACACGCCCCGCATTAGCCCCACGCC 8366 29 100.0 32 ............................. CTCACCGTCACCGGCCGCCTGAAAGCCGCGAA 8305 29 100.0 32 ............................. CCGTCCCGCTGGTTCCTCAACCCGGCCGGCAC 8244 29 100.0 32 ............................. GACACGTGGTCACCGGTCTTGTAGCCCTGGGG 8183 29 100.0 32 ............................. GACTACCTGTCGGGCTCCGTCCTGCGGCAGAT 8122 29 100.0 32 ............................. CCTGCCGGGTGCCCGGAGATCGTCTCGAACGA 8061 29 100.0 32 ............................. AAGGGTATGGGGCTGCTGCTGCAGGCCCTGAT 8000 29 100.0 32 ............................. GTGGCGGGCCGGGTCCTGGACGCGGCGGCCGG 7939 29 96.6 32 .........................C... CTGCGCGGGGAGAGCGTGTGGACGTCGTGGGT 7878 29 100.0 32 ............................. ACGTCCTCGAACCGGACGCCGAACGCGCTGCA 7817 29 100.0 32 ............................. GCGATCAATCCGAAGGACTGGCTAGACCCGAT 7756 29 93.1 0 T................A........... | ========== ====== ====== ====== ============================= ============================================= ================== 44 29 99.7 32 GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : GAACTACGGCGAAGGAACCGACCAGAATGACACCTACAGCGACACGGACATCAGCTGGTGACCGTCATCGTCCTCACCAACTGCCCGCCCGGCCTGAGGGGCTTCCTCACCCGCTGGCTCCTCGAAATCTCCGCCGGCGTTTTCATCGGCAACCCCTCGGCGCGAATCCGTGACCTGCTCTGGGCCGAGGTCCAGCAATACGCCGGCCAAGGCCGCGCCCTCCTCGCCCACACGACGAACAACGAGCAGGGCTTCACCTTCCGCACCCACGACCATGCCTGGCACCCGGTCGACCAAGAAGGACTCACCCTGATCCGTCGCCCCAGCGCCCAAGGCCCCTCGAAAGCCACCACTGCCGCACGTAAAGGCTGGAGCAACGCGTCCAAGCGGCGGCGGTACGGCAGATGACTGCGCTTAGCTGCTTTTGTGACGTTTTGCCGGGATCGATGAAACTGTCTTGCAACTGCCAGCCCTAGTGACAAAGCCCCAGGTCACGAAGA # Right flank : TGGCAGCGCGCCCAGCCCTGGACCGGGGAACTGCGTCCCGCCCGCGGCCGCGCCCAGCGGGAGAACACGAGCGGGGACGGAGTCCGCACCAGCCGCCGGCAGCGTGAGGTGATGCGGCTGCTTTGCTCGGGGATGTCGCAGCCGTCGCCCGCCCAACGGATCGGGGTGTCCAAGCGGACCCTGGAGGCGGAGATTGTCACCCTGAAGGACTTGTGGGGGGTGCGGACGCTGAACGAGTTGATCTACCAGTACGCGTTGTTCCCGGACCGCACCGTAGACGACAGCGAGGCCGCCCGGAGTCGGCGGCCTAGGCCTGCTCGGGGACGTGCTGGTGCTCGTCCCGGTGCGCCCCGCACGCCTGCCCGAACGTGTCCGTGCGGCAGGTGCCAGGGCCTTCGTACTCGTGGTCCCAGATGCTGGCCACGCTGATGCTGGTCTGTCCGGGCAGTGGGGGCTGTGCGGGGCGGGAGAGGATCGCCTTGAGGGCCCTGAGCCCGAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 20052-21663 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJTV01000026.1 Streptomyces sp. 1-11 strain 1_11 sequence26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 20052 29 100.0 32 ............................. GCCGACCGTACGCCCGCCCTTGGTGGTGCTGA 20113 29 100.0 32 ............................. GTCGGCCGGTCCCTGACCGCCTGGGTGAACGC 20174 29 100.0 32 ............................. GTCGCGGCCCGCTGGCTGATGGGCGAGGCCGT 20235 29 100.0 32 ............................. TTCATCTAGATCAGCCCGCGTTCACGCAGGTC 20296 29 100.0 33 ............................. CGGTGGGCGGTGGGGTGCAGGCACTGTTCCATG 20358 29 100.0 32 ............................. TGAGCGATTCCGCGAGCACCCACTGGGGAGTT 20419 29 100.0 32 ............................. CACCGGCGCGGACTGAGCCGCGGCGACGTCGT 20480 29 96.6 32 .......................A..... TCTCCGGCCTTCACTCCGGCCACGAACGCCGT 20541 29 100.0 32 ............................. CTGCTGTCGTTCGATGCGGAGCAGCAGGAAAT 20602 29 100.0 32 ............................. GAGTACTCCGTGTTGGGCTGGAGCCCGGAGAC 20663 29 100.0 32 ............................. GAGGCCATCGCCACCGCGCTCGGCATCGCACT 20724 29 96.6 32 ...................A......... TGGTCAACGGCCAGGATCCCCGGGCGATCAAG 20785 29 100.0 32 ............................. AGCACTCCGCCGGACGTCGGGAAGATCGTTGC 20846 29 100.0 32 ............................. GCGAAGGGGGAGACGATCTCCACCGTCGTAAT 20907 29 96.6 32 ........T.................... TCCGCCAGCGCCTCGTCCTTCGTGTGCACTTC 20968 29 100.0 32 ............................. TGGACGCGCACCATCGCGTTCCGGTACACCGG 21029 29 96.6 32 ............................T GAGATCGCGGCGAACACCATCACGGCCGGGCA 21090 29 100.0 32 ............................. GTCCCAAGGTGGTGCGGGGGCTGTGAGACCTC 21151 29 100.0 32 ............................. CCGTACCAGGACCCGAAGAGCTTGTCGTTGTA 21212 29 100.0 32 ............................. CCCAGGCGTGTGGACTGGCAGCCACACACCGG 21273 29 100.0 32 ............................. GACCACGGCGACCCGGGCGCATTCCCGATCGC 21334 29 100.0 32 ............................. CAGATCGTGGCAGCCGAGGACGCCTTCCTGGC 21395 29 100.0 32 ............................. TCCGCCCTGGCGTCCGGGGAGTCCCAGCCCTC 21456 29 100.0 32 ............................. GACGGCTTCCCTGACTGGCTCGCCGTGATGGA 21517 29 93.1 32 .......T.......C............. CCGCCCGGCCACCAGACCTACCGGCGCGCCGG 21578 27 89.7 32 ............--...........G... GACTAGAGGGCTGCGCACCTACGCCATTTGGG 21637 27 82.8 0 .....-.T......T.-........G... | ========== ====== ====== ====== ============================= ================================= ================== 27 29 98.2 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : ACGCGGGCGTCGCCTTCCCGATGTCGTGCACACCCGCCAGCCACACCACCAACCGGCGAGCAGCCACCAGCCCGCCCGGCAGCGGATCAGCGATCAGCCTCCGCACCGACACGGGCAGCCACTCGTCCCACAACCGCCCCGCCACGGCCGCGCTGTCTTCCATGTGCCGCCACAACGGCAGCCACCGCTCCCCCTCACGGTCGTGCTTGGCCCATACACTCGACGCCGGCCCGCCCAACCAGGCACGCAAGTCCGAACCGGCCGCCCTCTCCCCAGTCATGTCAGATGCATACAGGATGTAGATGACACGTGAAGTAGGTATGAAGAAAGTGAGAAGAATTAGCTGTTAGCACTTGCAGCCCAACACACGCCACCACCTACGACGAGACCGTGCCTGGCTTGTCACCCAAGAACTGTGGCCTGGAATGCAACGTTTGCCGGAATCAGCGAAACTTGCCGAAACCACCACCTCAGCTCGATAGCACCGCAGGCCACACAGC # Right flank : CGGAATACGCATCATCACACTGACGGAGATGTCCTGCTTCCCGCATGCAGCACGGCGCGTGCGGAGTCATCACTGTCAGTAGAGCTGGATGCGGGTGAGGACGATGTGCGGCGGGTCGGCGTCGGCGACGATGACGTATTCGGCGATGCCGAGTGAGCCGTCTGCACCGAGCGGCATGCGCCGCTGCTCGGGCCACTTCGCCGACGCGGTGCTGCCAGGCACCTGACCACGGGTGTCGTTGATCACGACCGTGGCAGCGACGATCGCGCCGAACACGTCACCAGGCAGGGTTCTGTCCATGAGGAGATCGGTGACCTCTTCCGACAGCAGGCACGGCAGGCCCTGAGGCTCCTCGCCGGAGGGCTCACTCAACGGGCAGACCTGCCTCGCGCCGGCGGCGCAGGAGGTCGGCAACCGTCGTGGTCGGCAGCGTCCCGTCCAGCGCGGCCGCGGTAATTCGGTCTCCGGCCGGGTCGGTGTCGAGCATCGCTTCGCACCAC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //