Array 1 12634-12246 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BJWX01000009.1 Nitrosococcus oceani strain NS58 Contig09, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     12633	    28	 100.0	    32	............................	TACCAAGTACATCAATATCTCTGGAGTTATTT	
     12573	    28	 100.0	    32	............................	TAGACAGCATTCTGAGCTGGGCGGTGGCGGTA	
     12513	    28	 100.0	    32	............................	AATTTAAAAAGAACAGAAGTCCCGTGTTATCG	
     12453	    28	 100.0	    32	............................	ACCTACTCACCAAAGATTGGGGTTTATCTATC	
     12393	    28	 100.0	    32	............................	ACCCTGGGGCTAGGCTTGGAAGTCAAGCGCGT	
     12333	    28	 100.0	    32	............................	GCTATAAAAGTTAATTAGTGAGAAAAGGGGAT	
     12273	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
         7	    28	 100.0	    32	GTTCACCGCCGCACAGGCGGTTTAGAAA	                                	       

# Left flank :   GGGATGATTACAATCGAACCAATAGCAGCCGTGCCTTCTGATGCGAATGCAATTGCTTATCGGCGTGATCGTAGCGCAGAGAAAGATTTAGCAGGGTTTAGGCAACGGCAAATGCGCCGCCGAGTCCGGCGCGCCGAACATGCCCCAAACCAGCCGGAAACGAACTTGAGAATAGAGGCAAAGAGCAGGCTGCAAGATAACGAGAAAGCGGAACGGCCACCTTATTTACTATTAGAACGGGATGGCCGACGACTGCCTATTCATATTAGTACGGCAAGCTTTCAGATTAATACGAATATTTGTCAGTTCAGTAGCTATGGATTAGCCAGGAAGGTTGAAGATAAATATTCGGCCGTACCCATGTTCTGACCTTACTTTATTTTATAGAATAAAAAGGCCAGTAATAACAAATAATTAAATGAATTTAAAAAAAGTAAGGTTTTAGGCTAATGTTCGACGCAAGACTTTATGGTTGCTACAGTTTTTAGCTTTAATTTACT
# Right flank :  GAAGCAAGTTCAGGACTTACGCAAAAGCGTATTTAAGGGTCCCCATGGTGTTGAAAGAGCAGTAGAGTTTAGGACATGAGCATATCGCTAACGTGCTTGGATGATTGCCGATATATCTAGCTGGTGGTGGACAAGCGCAGAATCCGGGAGATGCACCATCAGGCGGGGATACGTTATTTAGACTTTACGCCGGTGATGATGGTGGTCAACGCCTATTAAGATTTCAAAATATTCCGTTTTTAAGAGGCTTAATAATGTTCATTATTTCACAAGATTGACATGGATTAATCTACAGAGAGCGCCTTAATTCCAAGCTATCATCCTTAAGGTGAAGAAGGAGAAGAAACAAGAAAATAACTGCATTAAATCGGCTGATGAGAAATAGCTCATTAATGTGATAGGCCCAGGCAAAGGCAATAGCTCGGAGGAGGAGAAAAATGGCAAATACATATCTGGTGGAGAGGTTCTGTGCTGTCTTTGCGGCCTTGATTATGGTTGTG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACCGCCGCACAGGCGGTTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-9.20,-9.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.51   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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