Array 1 1167-8 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWVS01000142.1 Limosilactobacillus reuteri strain CECT8605 LreuteriCECT8605contig142, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1166 36 100.0 31 .................................... TAGTGGTGCATGTGCAATTTGCACATTATTA 1099 36 100.0 30 .................................... GAACACGTTGAGCTTGCCTCTGAACTGCCC 1033 36 100.0 30 .................................... TAATAATCCGGCATGGTGTCCATACCTTTT 967 36 100.0 30 .................................... TTGTCAAAACATCTGCCCTCTTTCATACGA 901 36 100.0 30 .................................... TTTTTCCCTCCTTTTGACCCTTTATATCAT 835 36 100.0 30 .................................... CCGGTGAACACTATACTCGACAAGTTTGGA 769 36 100.0 30 .................................... ATGCCTATATCATCTTAACCGATGAAAAGG 703 36 100.0 30 .................................... AGATAAAGGTGCAACCATCGTTGTAGTATT 637 36 100.0 30 .................................... ACATTATTCATGAGGTAGATAATTGCGGGA 571 36 100.0 30 .................................... GCTTCTTTATGCAAAAGGGCGATGAAGTTA 505 36 100.0 30 .................................... TTGACAACGCTTCTGGTACTGCAATCCCTC 439 36 100.0 30 .................................... GCAATCTTAACTGGACTAATCCTAATCTGA 373 36 100.0 30 .................................... CACAATAGTTTCACAAGAACCACGCCAATT 307 36 100.0 30 .................................... TTGGCGCTAACGAAGATATGGAACTGATTG 241 36 100.0 30 .................................... TGCCTGTGCATAGGAACGAGGAGACCCAGA 175 36 100.0 30 .................................... AGTGGAATGATAAAGCAGACCCAGCAGATG 109 36 100.0 30 .................................... GTTTGGTGAAGAGAACAAAACACCACGTGT 43 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 18 36 100.0 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : CTCGCCGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 23402-21980 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWVS01000066.1 Limosilactobacillus reuteri strain CECT8605 LreuteriCECT8605contig066, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23401 36 100.0 30 .................................... TTGGCGCTAACGAAGATATGGAACTGATTG 23335 36 100.0 30 .................................... TGCCTGTGCATAGGAACGAGGAGACCCAGA 23269 36 100.0 30 .................................... AGTGGAATGATAAAGCAGACCCAGCAGATG 23203 36 100.0 30 .................................... GTTTGGTGAAGAGAACAAAACACCACGTGT 23137 36 100.0 30 .................................... TCGCCGAGTACACCTCTTATCAAAATCTTA 23071 36 100.0 30 .................................... AAGTCCATAACAAATTGTTGAAGAACGGTA 23005 36 100.0 30 .................................... TTAAAGGCGTTGGTGCCCTGGCGACTCCTC 22939 36 100.0 30 .................................... AGATTCGCTTCAAGCTTATAGGCATCTTCG 22873 36 100.0 30 .................................... CGGATACTCCTAGGACCTTAGCAACTTTAT 22807 36 100.0 30 .................................... AACCTATCTTGGATAATCGCACACTACTAA 22741 36 100.0 30 .................................... TGTTCTTTAGGCAGAGCTTTTAGTAGCACG 22675 36 100.0 30 .................................... AGAGCTATCATGAATTCGTTCCTTAATGGC 22609 36 100.0 30 .................................... AAAAACCACTCACTGGATCGATCATTCTTT 22543 36 100.0 30 .................................... GGTATGGGATTGAAGTATTAACAGTCTCGT 22477 36 100.0 30 .................................... TGTCTTTGTACGTCATTAGTAAATCGGTGG 22411 36 100.0 30 .................................... CGGTTGTTGCTGGTGGTACTTCAAAGGATA 22345 36 100.0 30 .................................... TCACTTTTGCCCTTGCAGACAACGAACATA 22279 36 100.0 30 .................................... CCTATTCAAAACCCAGATGGCTCATATTTT 22213 36 100.0 30 .................................... TGACAAAAAATGATGTATTCAGAGTATATT 22147 36 100.0 30 .................................... GAATCTATTACCCGTGACTTTGCTAACTTC 22081 36 100.0 30 .................................... CTTTGACCAGTTACATATAGCGCATTAACG 22015 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.6 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : AGAACCACAATAGTTTCACAAGAACCACGCCAAT # Right flank : AAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAAACCTATTACTAAAAGAGGTGAAAATAATGGCAACAATTAAAGAAATTGCGAAAAAGTCAGGGTACTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATCATGACGGTGGCTAACGAGCTTGGCTATTGGAACAGCCACAAGAAAAACTCTCAGCAGCAACCAATTCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTACGCAATGCAATTATTAAAGAAGTCGATGAAGCTGGAGCGCAGGTTGAGATCTTTAGTAATATCAAAGATTTAATTGCGGCGGCTGATTCGTTCCAAGGATTTATTGGC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //