Array 1 70002-73213 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEMU010000032.1 Acinetobacter baumannii strain MRSN960 MRSN00960_contig00032, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 70002 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 70062 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 70122 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 70182 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 70242 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 70302 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 70362 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 70422 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 70482 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 70542 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 70602 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 70662 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 70722 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 70782 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 70842 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 70902 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 70962 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 71022 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 71082 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 71142 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 71202 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 71262 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 71322 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 71382 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 71442 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 71502 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 71562 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 71622 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 71682 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 71742 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 71802 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 71862 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 71922 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 71982 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 72042 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 72102 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 72162 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 72223 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 72283 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 72343 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 72403 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 72463 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 72523 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 72583 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 72643 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 72704 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 72764 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 72824 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 72884 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 72944 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 73004 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 73064 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 73124 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 73184 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //