Array 1 733-1035 **** Predicted by CRISPRDetect 2.4 *** >NZ_BACU01000376.1 Azospirillum sp. B4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================================= =========================== ================== 733 39 100.0 27 ....................................... GATGTCCAAATCGACTACGCACAAGAC 799 39 100.0 27 ....................................... GATGTCCAAATCGACTACGCACAAGAC 865 39 100.0 27 ....................................... GTTGAAGGCGCAGTAGCCGGTCTTCTG 931 39 100.0 27 ....................................... AATGGAAGATGGCGGCCGAGGCCGAGG 997 39 94.9 0 .TG.................................... | ========== ====== ====== ====== ======================================= =========================== ================== 5 39 99.0 27 GCCGTTGCGGCTGGACCGCAAATCCCTATCGGCTAAACT # Left flank : GGCCCCGCGTGGGCAACGGTTACCTGGTCCGGCCCCCTTCGGCCATTGGAATACCATGACCTTCATCGCCGCGTTGCGCCAAGATCGCGTGGATGCGCCGTGGCTGATCAAGGGGCCGATCAACGGCGAGCGCTTCAGGATCTATACCGAGCAGGTCCTTGTCCCGACATTGAAGCCCAACGACATCGTCATCATGGACAATCTCGGCTCACATAAAGGCAAGGCCGTCCGGGATGCCATACGGGCGGCCGGGGCTAGGGTGATCTTCCTTCCAAAATACTCACCCGACCTGAACCCCATCGAGCAGTTCTTCGCCAAACTCAAGCATCATCTGCGTCAAGCTCAAGAGCGATCTGCCGATGGCCTCTGTGCCGCCATCGGCAAAACTCTCCAAACCGTCACTCCCGCAGAGTGTTCAAACTACCTCGCCAATGCAGGGTATGTGCGAACCTAAAATCATCTCGCTCTAAACTGGAGATTGCCAGGCTACCACCGGCGGT # Right flank : TCGGACCGGAAACAACCCCTTGAAAAGAAGGGCTGTTTCCGGTTCCAGTCCCAGCAAAAATCCCCACACGGGCCTCAGAACAAGGCCAGCTGGGCGGGGTTTTGATTGGTCTTGCGGCGTTTGCCATCATAGGTGCCGATGTTCTGATACTGCCGGTCGGTGATGGTGACGATCTGGACGCTGCCCTTGGACGGGATGTTGGTGGCCACCTTGCGGGACAGCGCCTCCACCTGTTCCTTGCCCACGCACCAGCGCAGATAGACGGAAAACTGGGCCATGTGGAAACCCTGGTCCAACAGGAACAGGCGGAACCGGGTGGCCGCCCGCCGCTGTGGCTTGGTCAGGACCGGCAGGTCAAACAGTACCATCATCCACATGATCCTGTACCCATTCAAAGCCATCGTCCGCCCCCTCCGTCGCTCCCCGGTCACGGCCCGTATCGCCGGCCACCAGGTCCAGCGGCAAGGGGGTGAGGGGCAGATCCAGGTCCGGCCGCCCCG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.13, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTTGCGGCTGGACCGCAAATCCCTATCGGCTAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.90,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 8240-8869 **** Predicted by CRISPRDetect 2.4 *** >NZ_BACU01000290.1 Azospirillum sp. B4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 8240 36 97.2 30 .....A.............................. TCGGGTGAGCATGTACCGGCGGCGGTGCTG 8306 36 100.0 30 .................................... GGCGGCCACCGCCGTGTGGTTGTCGCTGTT 8372 36 100.0 30 .................................... CCATACCGAAGGTAAGTGCGAAGCGGCTGA 8438 36 100.0 30 .................................... GGATCACGTCGGCGGCCGGCACGCGGGTCA 8504 36 100.0 30 .................................... TCTCCCCGCAGCAGGCCGTCCCCTACAAGT 8570 36 100.0 30 .................................... CACCACGTTGACGTCCAACACCAACGGCTT 8636 36 100.0 30 .................................... GAACTTCCCGTTCGCGCCCTCGTTCATGTA 8702 36 100.0 30 .................................... GATACGTCGACCTTGCCCTTGAGGACGAGG 8768 36 100.0 30 .................................... CTACATCGGAACGGATCTCATCTAACGGGT 8834 36 91.7 0 ................................G.GC | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 98.9 30 GTTGCGGCTGGACCGCAAATCCCTATCGGCTAAACT # Left flank : CACGTCGCCGCCATCGACGTGGCCGATGACAAGCTGGAGCTGGCCAGGAAGCTGGGCGCCGACCTGACGGTGAACGCGCTGAAGGAGGATCCGGCCAAGCGCCTGCACAGCGACATCGGCGGCGCCCATGGCGTGCTGGTGACGGCCGTGTCCCGCCCCGCCTTCACCCAGGCCGTGGGCATGAGCCGCCGCCACGGCACCGTGGCCCTGATCGGCCTGCCGCCGGGCGAGTTCGGCCTGCCCATCTTCGACGTCGTGCTGAACCGCATCACCGTGCGCGGCAGCATCGTCGGCACCCGCGCCGACCTGGCCGAAGCCCTGGCCTTCGCCGGCGAGGGCAAGGTGGCGGCGACCGTGGAGGTCCAGCCCCTGGACGCCATCAACACCATCTTCGACCGCCTGCGCGCCGGCACCATCAACGGCCGGGTGGTGGTGACGGTGTGAGCGACACCCGGGCGGGATGGTGGCGGGTGGATCCATCCGTCACCATCCCGCCATCG # Right flank : CGGGATGAAATAAGGCTGATTCGGGATTGGATTCCCAACGAGCTTGGAATGTGATTCAAGGTTACCGGTTTGATTTATAGGGGACCGGGAACGATGGGTCGTCCGTACTCGATGGATCTTCGTCAGCGCGTTGTTGACGCGGTTAAGCTTGATGGCCTGTCACGCCATCAGGCCGCGAAGCGGTTTGGCGTTGCGGTCAGCACGGCGATCAAATGGCTGGAGCGCGAGGCAGTAACCGGCAGCGTGGCTCCTGGTCAGATGGGGGGGCATAAGCCGAAGGCGATCTCCGGGGAGCACCGGGACTGGCTGCTGACGCGCTGCGCCAGCGGCCCGTTCACCTTACGTGGTCTTGTCCGCGAGCTGGCGGACCGGAATTTGAAGGTGGACTACCGCTCGGTCTGGGAGTTCGTGCATGCTGAGAAACTGAGTTATAAAAAAAGACGTTGGTCGCCACGGAAAGAAGCCGGCCGGACATCGCCCGCCACCGTGAGCGATGGCTG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGCTGGACCGCAAATCCCTATCGGCTAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.50,-3.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //