Array 1 35056-31457 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPPB01000007.1 Lactobacillus sp. F551-2 contig7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 35055 36 100.0 30 .................................... AAATCATACCCAGAACTATCTGCATCCATA 34989 36 100.0 30 .................................... CAGTAGTAGTTTCATAAGCACCCAAATCTC 34923 36 100.0 30 .................................... ACCATTAATTTTTCCACCACATGCCTTAAT 34857 36 100.0 30 .................................... GCGTGGATCGGGTATATCGATGCCGACTAG 34791 36 100.0 30 .................................... TAAATCTTGCTTAATCTTGGCAGGATAGGT 34725 36 100.0 30 .................................... GACAAAAGACCACACATGCTTAGATGCTTT 34659 36 100.0 30 .................................... AAAGAAGGTGAAAAAAATGTCAGACAAAGA 34593 36 100.0 30 .................................... TCAATAAAAAAGAACACTATTTAGTGTCCT 34527 36 100.0 30 .................................... AAATTAATTTCTGACTTTGGCTGGTGCTGG 34461 36 100.0 30 .................................... CGAGGACCTGACTGGGCATCATTAACCATA 34395 36 100.0 30 .................................... TCGCTTTCATTGTCTGAAGGCAATATATAG 34329 36 100.0 30 .................................... GATTAGCAAGCGTGAAAAATGACGTGTTGC 34263 36 100.0 30 .................................... AGCAGATCAGACTGAGCCCTCCATTTTTTT 34197 36 100.0 30 .................................... GCAAAGGTAGTCGGTATGTTCCACTCTTTG 34131 36 100.0 30 .................................... TTGGCTCTGTGATTGCTTATCGTTTTTCAG 34065 36 100.0 30 .................................... CGAGGCTCTGCCCCTGTTACTTTGTGCAGC 33999 36 100.0 30 .................................... TGTCCTTATCGTATGGCAATGCCGAGTAAC 33933 36 100.0 30 .................................... TTACAAGATTAGTAATATCATCTGTTGAAG 33867 36 100.0 30 .................................... ACCAACTTATGGAGCAGAACCTAAACACGC 33801 36 100.0 30 .................................... TTTAATTCCTCTAAACTATTCAATCCCCAT 33735 36 100.0 30 .................................... TGAAAGATCAAAACTTAAATTATATTCAGT 33669 36 100.0 30 .................................... GAAATATATTGCTCAAAATGTGGGCAAAAA 33603 36 100.0 30 .................................... ATGCAAACTGGCATTGCCCTAATGGTCAAA 33537 36 100.0 30 .................................... CAAGCCCTAGAATTAAAGGGCGGTGAGAAA 33471 36 100.0 30 .................................... GGTCGATGGTGGCGGATTCAATTACGACGA 33405 36 100.0 30 .................................... ACCTGCATACGTCTACTTGTATTTGCAAAA 33339 36 100.0 30 .................................... TAAAGAGCCAGTTCACGTCTACTCTAACAA 33273 36 100.0 30 .................................... ACAAGGTTTAAACTTGCAAACGGTCTATAT 33207 36 100.0 30 .................................... GAATATTTAAATTTATGCAAGACCAACAAA 33141 36 100.0 30 .................................... CAATGACACAAGCACTAAACTACATGCGGA 33075 36 100.0 30 .................................... ATTTAATCCACCTTTATAAAAGTGTTTTAA 33009 36 100.0 30 .................................... AGGAGGCTTGGTGGGGTATGGCTATCCCGT 32943 36 100.0 30 .................................... GCGAGCCATTTGAATATCGTGTTGATGGTA 32877 36 100.0 30 .................................... TAATTATATGTTTTGCCGTCACCACGAGTA 32811 36 100.0 30 .................................... CAGTTCAATATAAAAAATTATGGTGACGTC 32745 36 100.0 30 .................................... CTCTAAGAAGTGGCTAATGGCTATGAAAAA 32679 36 100.0 30 .................................... ATAAAAAGCAACAGTTACCACTGCTAAGAG 32613 36 100.0 30 .................................... ACTGTGAAAATTAATGGCAAAACAGTAAAT 32547 36 100.0 30 .................................... ATCCTGATAATGTCTCAGAAGCTAGCGTCG 32481 36 100.0 30 .................................... TTGCAAAATATCAAGGTCTAATGCAAAATC 32415 36 100.0 30 .................................... TCAGGTTCCACTGCAGTTGTCAGTGCGTAA 32349 36 100.0 30 .................................... CCAAGACAGGTAAGGATAAACAAGATATTT 32283 36 100.0 30 .................................... GCTGAAGCCATTATTGTTACTGTTAGCTCC 32217 36 100.0 30 .................................... ACGGCGCAGGCGATTTTATCATTTGGAACA 32151 36 100.0 30 .................................... AAATAATGGCTGCATTGCTCTATTTGGTCA 32085 36 100.0 30 .................................... TCAAAGGTAGAGTATACTCTATAACCCCTA 32019 36 100.0 30 .................................... ATACTCTCGGTTAATGGGACCGTAAATTCC 31953 36 100.0 30 .................................... TTCGTCACCTTGCCATTAACATCAGTAACA 31887 36 100.0 30 .................................... CCTCAAATTTTGTTTTTAAAACTAAATTGG 31821 36 100.0 30 .................................... TTCGTCACCTTGCCATTAACATCAGTAACA 31755 36 100.0 30 .................................... CCTCAAATTTTGTTTTTAAAACTAAATTGG 31689 36 100.0 30 .................................... GGCAAGCCTACTCTGTGTGGCGATTGGAAA 31623 36 100.0 30 .................................... CTTGGTTGAACCACGTCCTCCTTTGAGCCA 31557 36 100.0 30 .................................... CGGGAGTGTCAAATGGTGACTACAACCAAC 31491 35 88.9 0 .................A.............T-..T | ========== ====== ====== ====== ==================================== ============================== ================== 55 36 99.8 30 GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Left flank : AGTGGAAATATTACTAAAAAGTATATGCCCCATATTGTAAGTAGTTATCTGAAAAATTTAGATGAAGAAAATCGCAATAAAGTGATTAAGTCTTTTTATAATTTAGAATCAACCTTGCAAGATTCACTTTTACTTGAAGACTTACCTTTAGCAATTGATTTTGATGAAGTCTTAAAAAAATTACTTAAATTTACAGAAATTCATTTAGATAAATCAATGTTGCTCAGTCCATATGGTATAATAGAAACAGTTTTGAAAATTCACCAAACGTGTAATTTAAAATCAGTTCCTGTTATTTGTAATGTAGCTCATTACTTGGAAGAACGGGAGTGGCAAGAATTAGCTAGTCTTGTCACAGAAATGAATTTAATTTTGGTTGTAATTGAATTCACGACAAAAGAAAATTTGGCAATTTCTAAAGACATACCTTTTTACTATATTGATAGGGATCTAATCGATTGGTACTAGCAACAATATTAAAATCATATTATAAAATATCG # Right flank : GCGTTAAAAAACACTAATTAAAGAAAGGCTGCTACTTGTTCAAATGCAAAACATACTAAAAAGTAACAACAACAAACTATACCTTTTGTCAGTGATTACCGATAACTTGGGCAGCTCTTTAATGTCATTTGCATTGCCGTTAATGGTTCTTGGTATCACTAAAAATGGTATTCACTTATCAATAATTTCCATTATTGAAACATTGCCAATTTTGGTTTTAGGTCTTCCAGCAGGTGCTTTAACGGATAAATTAGATGTTAAAAAGATTCTCATTTTTAGTGATTTGATTAGATTAATCAGCTACTTGATTCTTTCCGCATCATTTGCATTCCAGCTAACAGTGAATTGCATGATTTTAATTATTTATGCGGTATCACTTGTCGTCAGCGTGACAAACACAATTAATACGGTGTCAGAAATTACTTTTGTTTCTTTTTTGGTAGAAAAGAAGGACTTTTCAGAATTAAACAGTCTAGTTTATGGCATACAATATGCAGCTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.40,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //