Array 1 16853-17747 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHFZD010000012.1 Streptococcus mitis strain E651 NODE_12_length_23759_cov_115.964786, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     16853	    36	 100.0	    30	....................................	AATAACAGGGTGTAAAACAATGTTTCTCAA 	
     16919	    36	 100.0	    30	....................................	TCAGCGAGTGAAGTGACTAATGAAACGATA 	
     16985	    36	 100.0	    30	....................................	AAACGATTTTCCCGTTAAGTATTATCTTAG 	
     17051	    36	 100.0	    30	....................................	TCATAATAATTTTCGTTGTTAAGAGTGTGA 	
     17117	    36	 100.0	    30	....................................	ACAGCTTTATCCGAACCAATAACGGAAGTA 	
     17183	    36	 100.0	    30	....................................	AACCGTCTTTTTTAACATAATCATCTATGT 	
     17249	    36	 100.0	    31	....................................	CTTGTCATGTGGATATAATACAAACCATCAT	
     17316	    36	 100.0	    30	....................................	ATGGCCAGTACAAGACCACGAAGCCAGATA 	
     17382	    36	 100.0	    30	....................................	TAAACTGAAATTGCAGGTTAAAATCCCACA 	
     17448	    36	 100.0	    30	....................................	AACAAAATTACGCATGGAGTGGCTACACAA 	
     17514	    36	 100.0	    30	....................................	GCTAGATACCCTCGTCCATAATCAGTAGTT 	
     17580	    36	 100.0	    30	....................................	TTTCTAATAACGGAGTTATCTCAGCTAATA 	
     17646	    36	 100.0	    30	....................................	ACAACTCTATTACTGCTAAAATCCGAGTTA 	
     17712	    36	  94.4	     0	.................................CC.	|                              	
==========	======	======	======	====================================	===============================	==================
        14	    36	  99.6	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                               	       

# Left flank :   ATCAGCTTAATGACAAGCCAGAAGTCAAATCCATGATTGAAAAACTGGTAGCTACGATTACAGAATTGTTAGCATTTGAGTGCTTAGAAAATGAACTAGACCTAGAGTACGATGAAATCACCATTCTAGAGTTGATCGATGCTCTAGGGGTCAAAGTTGAAACTCTGAGTGATACACCTTTCGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTCTTCATCAATGCGTCCGCCTATCTATCAAAGGATGAGTTAGTAAATCTGATAGAGTATATCCAACTCAATCAACTAAGGGTCTTATTTGTCGAACCTCGAAAAGTCTATGATTTTCCTCAATATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGGGTAACAATTGGAGCCTGACGAGCTGAAGTCTGGCTGAGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG
# Right flank :  CATATTAAAAGCTACTCATTTTTTAAGTAGCTTTTTTCTTATTCAAGTTTACATATTAGTCGTCACAACCCCATTCCCTTGTAGAAAAGCAAAACTGCGAGTCCTACGAATAACACTACCGCTCCTAACCTCTGGCTGGTACCATACATCCTTCTTTCTCCTCGAACTGGAAAGATAACTGCTAGAAATGCTCCGCCGACTGCACCACCGATATGGCCTGCTAGGCTGATTCCTGGAATCAGAACACTTCCAATAATGTTAACCACAAAAAGTGTCAGATAAGATTGGCCTAGCTGCTGGATATAGGGGTTCCGAGTAGCATAGCGAAGAACAATAATCGCGGCAAATAGCCCATAAAGAGAGGTAGAGGCTCCTGCTGCTAAGGATTTGGGACTAAATACAAAAACAAAGAGATTGCCCATCATTCCAGATAATAGATAGAGAAAGAAAAACTGCTTGGATCCGAAAATTTCCTCTACTTGCCTACCAAGATAATAGAG

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [58.3-78.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.27   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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