Array 1 6573-4029 **** Predicted by CRISPRDetect 2.4 *** >NZ_VBSE01000039.1 Apilactobacillus kunkeei strain UASWS1868-NN17 Contig41, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6572 36 100.0 30 .................................... AAAGTCTTATTAGCTAGTGAAGTGGATTCA 6506 36 100.0 30 .................................... TAATTATATGGACCAAACTACTTATCAAGT 6440 36 100.0 30 .................................... AACTGTTAGCGTCTAGATCATTTGTTCTAA 6374 36 100.0 30 .................................... TTAAGATTATCTGGAATATCATTTCTATCT 6308 36 100.0 30 .................................... AACGAGTGCTTGTGGTGCATTATCGTAGTA 6242 36 100.0 30 .................................... CTTGTTTATTTTTAAAAAACGTTAATTTAA 6176 36 100.0 30 .................................... GCTGATTAATTTGTTCTTTTGCGTAATTTA 6110 36 100.0 30 .................................... ACATCATGTTAGTAGCATTACCTTGTGGAT 6044 36 100.0 30 .................................... TAACGATTACTTGATTATTGCTAACGCTGA 5978 36 100.0 30 .................................... CCGTCAATAGTGGTAAAATGTACTTTGAGC 5912 36 100.0 30 .................................... AATCATTCGAAAATTTAAGGGGGAAGAATA 5846 36 100.0 30 .................................... TTAAACGGCCTTATGGACGTTTACCTACCT 5780 36 100.0 30 .................................... ACTATTTAGGCCTAGAACAAGACAGCATTA 5714 36 100.0 30 .................................... AGTTGTGTCGATAAAAACATCAGCATCCCA 5648 36 100.0 30 .................................... TTCATTCTCAAGGTTATCGGCATAAATTGG 5582 36 100.0 30 .................................... TCTTCGCCGCGTGCTACAACAATTCCGGCT 5516 36 100.0 30 .................................... ATTGCATCAACTAATGTTTACGATGGTTCT 5450 36 100.0 30 .................................... GTTTGATAGATCCCGAAGGTCTACCACTAA 5384 36 100.0 30 .................................... TAAAATCTTCATACCTTTTAATATCATTAT 5318 36 100.0 30 .................................... ACGAACTACAGACAACGTTTAATCTAACTT 5252 36 100.0 30 .................................... TCGTCGCCATGATGATTAAGCGTTAAACGC 5186 36 100.0 30 .................................... ATTTGGCAGTATTGAGATTTAAAAAGGCTA 5120 36 100.0 30 .................................... ACTATTTATATGGGAATGCCTGACCATAAC 5054 36 100.0 30 .................................... AACAAACCGAATTATTAGACAAATTAGTAA 4988 36 100.0 30 .................................... TAATTTAATCATCCTTAACTTCCACCTTTC 4922 36 100.0 30 .................................... TCATATGAATTAACACCGTTTATGTAACTG 4856 36 100.0 30 .................................... TTTTTTATATATCTTTCCGATTTGCAAATA 4790 36 100.0 30 .................................... CGATTAAAAAAACGTTGTTATGCTCTTTTA 4724 36 100.0 30 .................................... TAGCACTACCACAAGGATTTAACGAAGCAT 4658 36 100.0 30 .................................... AATAAACACACCACATGTTTTTCAAATGTA 4592 36 100.0 30 .................................... AACCTCAACTGACCTAAACACAGCAATCAA 4526 36 100.0 30 .................................... GTTCTGAGTTACTTAAGCACCCTTATATTA 4460 36 100.0 30 .................................... AAAGACAAAAGGCTGGTGGATTTCTAGTGT 4394 36 100.0 30 .................................... TAAACACTGCTACTGTTCCGATTGCGTTGT 4328 36 100.0 30 .................................... GTGATTATCGTCTTTAATGCTAGTCCGCAT 4262 36 100.0 30 .................................... CAAAATAAAAACGCTATAACCATTGATATG 4196 36 100.0 30 .................................... TCGACATGTTTAGCTTAAGCGACTGCACGG 4130 36 100.0 30 .................................... AAAACAAATAATGGTTTAGTAAAAGTTTTA 4064 36 94.4 0 ................................A.A. | ========== ====== ====== ====== ==================================== ============================== ================== 39 36 99.9 30 GTTTTAGAAGTATGTCATATCAATGAGGTTTAGAGC # Left flank : ACGGTCTGTCTACTAAACAAATTAATTCTGTTGTAAAGAATATAGTTGGTTATTTTGATAATGATGACATCGACTATATGCAAAAAACTATTTCATCATTGAATAATTTTATTCAAGAAAAATTATTTTTTTTGGATATACCGCTATTAATTACTCAAGATATTGATATAGAAAAAACTATAAAAAAACTGAATATTCATTTAAATCCAGGTATTGAAGGAAAACCTTATGATATAATAGAATTATTGATAAGGTTAAAGATGGAAACTCAAGATAAATCATTGATTGTTGTAAATAATTTAGCTAATTATTTGAACAGTGATCAGCTACAAAGCATTGAAAAATTATGTAAAGAGTTTGAAGTTCCATTATTAGATATTGAATTTGGTAAAAACAATGATATTAGTAATACTGATTTTTCATTTTGTCAGTATTACTTTATAGATGATAACTTTATTGACTGGCATTCTTAAAAATTAGATTTTGATTATAAAATATCG # Right flank : TAAGACTAAAATGATAAAGCAAAGAAATGTTTCAGAAATATGGCGATTTAATAATTTTTATAATTTAGGGGATTCTTTAATGAAAGTATGTTACTGGAATTGCAATGGAGCTTTTAGAAATAAATATAAGGAAATAATAAAAGAAAAAGCTGATTTGTATATAGTGTCTGAGGTTGAGGATATTAGTAAGTTATCTTTTTTGAATGGATTTAAGCAAAAACTATATAGAAAAATTAGAGGGGATCAAAAAGGAATCTTATTCTTTACTTTTTCTGACGATGAAATCCTACCTTTGGAAAATAATAATTACGGTATACGCTATATTATCCCCGTACTTTTTAGGGGATATAAAATTTTAGGAGTATGGATGAAAGGAGGATATATTGAAGATTTATATACATATTCTGCGATTAATATAAAAATGATTGAAAATTCAATTATTATTGGCGACTTTAATAGTAATGCAATTTGGGATAACAAACATGGCGATCGTAATCATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTATGTCATATCAATGAGGTTTAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //