Array 1 35771-38790 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPC010000014.1 Arcanobacterium phocae strain 14592 NODE_14_length_55545_cov_57.369853, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 35771 29 100.0 33 ............................. ATGATTTTAATATCGATATACCAATTCGTACTT 35833 29 100.0 32 ............................. TTCCGCAACGCCGTTGAGGAAGCACACATCAC 35894 29 100.0 32 ............................. CAGATACCTACACCGCACGTCGAGCGGATAGA 35955 29 100.0 32 ............................. CTGAATACGAAAATAGCCGGCGTGTTAAACCG 36016 29 100.0 32 ............................. GGCGTAATCAATTTCTTTGTAAATTCCTCAGC 36077 29 100.0 32 ............................. AAATCTTCTTCACAGGGGGACTTCCCTGCTGG 36138 29 100.0 32 ............................. GCCATGCGTGCGTTGCGAGCGTTCCTATTAGC 36199 29 100.0 32 ............................. ATTGATTGTTAATGCGTCATTGAAGCGTGCAT 36260 29 100.0 32 ............................. AAGCTATTGCATTATTTACGAAGTTTGCCATT 36321 29 100.0 32 ............................. TGAATACTGAATCAACCCGGCGTTCAACGCTC 36382 29 100.0 32 ............................. TGATCGAAGATTTCTATGAGGTTCAAGCGAAT 36443 29 100.0 32 ............................. ACTGAGAAACAACCCCAGCCCCAGGAACCGTT 36504 29 100.0 33 ............................. AGTGGCTCCGTTGAGGAGTAGTACGAAATGATT 36566 29 100.0 32 ............................. CGTCTAAGTTGCCCCTTAGGCGGTCATCTATA 36627 29 93.1 32 ..........................G.G GTGATGGGTTCGCCACTGGCCTTCTACCAGTA 36688 29 100.0 32 ............................. ATTTTCGGACATAACTTCTTCTCACCTACCGC 36749 29 100.0 32 ............................. GATTTGTGCCCAGTCGTCGAGGTTCTCCCCGA 36810 29 100.0 32 ............................. GACATCGGAAAGGGTTGGATCCCATGAGCGCT 36871 29 100.0 32 ............................. GTTTTGACGTTCCATGGAATCCCGCCATTTGC 36932 29 100.0 32 ............................. AATTTCGAGCTATGCGATCGGCAGGAACGCTG 36993 29 100.0 32 ............................. AGGCTCTACGAGATAGCGGAAGGAGTTGGGAA 37054 29 100.0 32 ............................. GGTTCGTCCTCTATCCTGCCTGCACTACTTTT 37115 29 100.0 32 ............................. GAAAAGATCATTGAAAACCGTCCACGGCTACA 37176 29 100.0 32 ............................. TGTTCCAGTAATAAAGCTAGCTATTTCTTTGA 37237 29 100.0 32 ............................. AGCTTATATCGAGAGTCTAACTGGCGAGAACC 37298 29 100.0 32 ............................. GAATGCGTAAGGTTTTCGAAGTGTAGTCATAC 37359 29 100.0 32 ............................. GACTTGGAAGGTGCTATCTCGCCGACCTTCCT 37420 29 96.6 33 ............................A CCAAAAGCTACTCGGAAGGCGCGTTCTTCGGGG 37482 29 100.0 32 ............................. CTCGGCCTGGGCTGGTGTTATAGTTTTTTCAT 37543 29 96.6 32 ............................T TAGTGCAGTACCGGAGTTGGCGTACACGGATG 37604 29 100.0 32 ............................. GAGATACCGTTCACGAAACCACGGATAACGTT 37665 29 100.0 32 ............................. CGTTATCAACATCGAAAATCTGGCTAGACTCC 37726 29 100.0 32 ............................. TTTTGGGTATAAAAATATCCCCTGCGCTTTTC 37787 29 100.0 32 ............................. ATACTGTAAATTCCTCCTGTCCACTCTCCCGG 37848 29 100.0 32 ............................. TGGTGTGCCTGTCGAGTTACTTGCTGGACCTC 37909 29 100.0 32 ............................. ATCAGCGAATATTCCCGCCCGTCCAGTGACGG 37970 29 100.0 32 ............................. TTGCGAGTCTTGATTGTAGCGCCGATAATCGT 38031 29 100.0 32 ............................. TATATCCGAAGGGCTGGATTGTCAAGAACGCT 38092 29 100.0 32 ............................. GAGCCACCCCAAGACAACCGTTAAAGAATCCA 38153 29 100.0 32 ............................. TGCTTTGGTGCGCGCTGCTGAGCTGATGGCGC 38214 29 100.0 32 ............................. ACAGCTTCGAGAATGGCAAGAAGCTGGTCGCC 38275 29 100.0 31 ............................. TACACGGGGGAGCTTTTTGAAGCTACTCCAG 38335 29 100.0 32 ............................. AAGGTCTAATCCTTCCGCCTGGTCAAGAGGGT 38396 29 89.7 32 ..........................CTT TCTCGCATTGCTGCAAGATTTGCTGTACTTGT 38457 29 100.0 32 ............................. AGGAGGTGCGCTAAAAATCGAGCTAGTAGATG 38518 29 100.0 32 ............................. ACATCATGGTATGCCCTCCAAACCGTTGAAGA 38579 29 100.0 32 ............................. TTGCTGTGTAGGACGAAATCGTTGAAATGGTT 38640 29 100.0 32 ............................. GGTGGAATTAGCTGTGCGTCTTGCACTTTCGC 38701 29 96.6 32 ............................G TGCTCGCGGACATGACGTGACGCGCACCGTCG 38762 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================= ================== 50 29 99.4 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGCTTTCGTTAGT # Right flank : CAAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //