Array 1 19921-12202 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFBY01000036.1 Acinetobacter baumannii strain T12 14-T12_1_(paired)_trimmed_(paired)_contig_36, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 19920 30 96.7 30 .............................G ATGCATCAAGAACGAACTGTTGAAGATGTG 19860 30 100.0 30 .............................. TCACTAAAATATCTAACTCAGTTCTTAAAG 19800 30 96.7 30 .............................A TCGGTTAAAGATGCAAATGGTGAACAATCT 19740 30 93.3 30 ............................GC TTTGATCAGTAACTCAATGTATGAGTCATC 19680 30 100.0 30 .............................. ATCGAAAAATGGGAGTATAACCATGCATGA 19620 30 100.0 30 .............................. CGCAAAGATCATTAATCAAGGTCATGATGC 19560 30 96.7 30 .............................A AGAAATCAAAGACTTATCTGGTCAGGTTGA 19500 30 100.0 30 .............................. TGGTCAAAATCATTCACACAACCATTCACA 19440 30 96.7 30 .............................A TCGAAGAAAAGGACCGTCGGTTCTTAGTGC 19380 30 96.7 30 ............................T. CAGAATCACCGCATCGAGAACGTGTAATTA 19320 30 96.7 30 .............................A CATTCAATTTGATCAAACGGAATTCATGTT 19260 30 100.0 30 .............................. TAGATAATCATCACCCAGTATTAAATGTGG 19200 30 100.0 30 .............................. TGCGTTTTTGAAAGGTCGCCATTGTTTAAA 19140 30 93.3 30 ............................TC AAATGAACATTATTTGTGGTGAAAATGGGG 19080 30 96.7 30 ............................T. CTAAAAATTCAGGCTCATTACTAACGCCCT 19020 30 100.0 30 .............................. CTGCATTCTGAAGTGGAGTTTCTTCTAAAT 18960 30 96.7 30 ............................G. GAGTGTCGGTAGGAATTTCAATCCACCATC 18900 30 96.7 30 ............................T. GCCGCAATATCTCAGAAAAGCAAGATCAGT 18840 30 100.0 30 .............................. GATAGTATCTTGGGCGCAGGCAAAAGGAGC 18780 30 93.3 30 ............................GC CTTGTCGCTGCTCTTGCCGGATAATCGTTC 18720 30 96.7 30 ............................C. GCATGGATCTATTACGACATCTGTACAGTT 18660 30 93.3 30 ............................TC TTCCGTGTTAACAATTGCTTGAGCTATTGA 18600 30 93.3 30 ............................TA ATTGAAAATGCTCAATATGTAAAAGATTTT 18540 30 100.0 30 .............................. GGTGTAAACGACAATCTCTTAACCTTCCCC 18480 30 93.3 30 ............................TA AAGGTTCCTACTAACTACAATCCAGCAACA 18420 30 93.3 30 ............................TA ACGGTGCACGAACTGTTATTAGCGGCAAAA 18360 30 93.3 30 ............................TA CAGACCGAACACTTCTAAATAACTATGCCG 18300 30 96.7 30 ............................G. TACGTCTACGGTACGTGGTTAGCATGATTT 18240 30 93.3 30 ............................CC TGCCGTTAATTCACCGCTTGGGTGATAGAA 18180 30 93.3 30 ............................GC AGGGAAAAGTATAGCTTTAGATATATCCCA 18120 30 93.3 30 ............................TG TAAATATTCGTTTTTATTTTTTTAGGTCAT 18060 30 96.7 30 ............................T. GCTCTAAGCATTCCGAAGCAAGGAAATGTG 18000 30 100.0 31 .............................. CACATTTTGGGATGGCAATAGCATTATTTGT 17939 30 93.3 30 ............................TG ATCTTTGCAACCAAGCATTCAACGAATCCA 17879 30 96.7 31 .............................A TTTCATGCTTATGTGCTAAATTCATATTTCA 17818 30 96.7 30 ............................G. GTATTACCGTCATTTTTATGATGGTACATG 17758 30 96.7 30 .............................G TATCCGTTGCATTAATCGCTTTGGCTCAAA 17698 30 96.7 30 ............................G. GTTGTAATTTCGCTTGTATTGATCATTGCC 17638 30 96.7 30 .............................C ATACCCCATATAACGGTTATTGTAGTTGCT 17578 30 93.3 30 ............................TA TGATCTATACATTACAACAAGCAACACAAA 17518 30 93.3 30 ............................TC AATGTTATATCACATTAGATTAACAAAACA 17458 30 93.3 30 A............................C ATCGATGGCAGTTTCACTTTCTACTGCAGG 17398 30 93.3 30 ............................TC CAGAAGTGTCACCGCCACCCTTAACACCAG 17338 30 96.7 30 ............................G. CGGTCGAATGTCTGGGACTTTTTTGTTATA 17278 30 96.7 30 .............................A AGGCATACACCCAGTAGAAGATAAACAAAA 17218 30 100.0 30 .............................. ATATGTGCGTAACCGAGCAAGCTTGTCACG 17158 30 100.0 30 .............................. ACCGAAAGATGACAAAAAGCACCCTAAGGT 17098 30 96.7 30 .............................A GTGAAAAAAGCTGACAGCAAAATAAACTCA 17038 30 96.7 30 .............................C TTCATAGAAACCGGCTTTCGGAAAGTTATC 16978 30 96.7 30 ............................G. CCAAGTCTTAAAGATGTTCAATGGGCAATG 16918 30 96.7 30 .............................A TCGAATCAAAATATTAAAGAGTTACGTCAT 16858 30 96.7 30 .............................A TTCGTGTTGACCAGGAATTAAAAGACACTT 16798 30 96.7 30 ............................C. CAAAGTATTTAACACGGTTGTTAGCAGGAT 16738 30 93.3 30 ............................CA AAAAAGAGCTTGCATATACAGATTCTAGTA 16678 30 96.7 31 ............................T. GGTGTTGAACAATGCTTAAGTGAAATCACAA 16617 30 93.3 30 ............................TA TATCAATCTTGTTAAGAGAAGCCGCATCAT 16557 30 96.7 30 ............................G. GATGTGTATGTTCTATTAGTGGTGTAAATC 16497 30 96.7 30 .............................A TCCCGCTTAGAACTTGTAAACAAAATTCTG 16437 30 93.3 30 ............................TA GTCCCGAAATTTCAGTAGGTGGCTCATAGC 16377 30 96.7 30 .............................A TCCCGCTTAGAACTTGTAAACAAAATTCTG 16317 30 93.3 30 ............................TA ATACACCAATCCCGCTTAGAACTTGTAAAT 16257 30 93.3 30 ............................GC AATCTGGTTATCCGATTCCTATTTATTTTG 16197 30 100.0 30 .............................. CATCATTGCAGTCTTATAAGAGCCAGGCTG 16137 30 96.7 30 .............................A ACTGCATAGATGACCATTAGAGACATCCCC 16077 30 96.7 30 ............................G. AGTGGGGACATTGTGTACGCTCATGATGTT 16017 30 93.3 30 ............................TC ATGCCAGTTGCAAAGTCCAAGCCCACTGCT 15957 30 93.3 30 ............................TA CTAACTGTAAAACAGAAGACTTGCCAACTT 15897 30 93.3 30 ............................GG TTTAAGTCCCCGAACATTACATAAGTAAAT 15837 30 96.7 30 .............................A TGGCATTTGCTGCTGACGGGGATTTCGACT 15777 30 96.7 30 .............................A ATCAAAATCGTGGCAGATAACAAAGCGATC 15717 30 93.3 31 ............................TA ATCTCGGTATTTACGCCAAGGGCGCTATTCA 15656 30 100.0 30 .............................. GATCTACCCTTTGAGCTAGATAAAACTTTT 15596 30 96.7 30 ............................T. CACGTGGTACGCGCTGTAAGCCTGTTTGTT 15536 30 93.3 30 ............................TG AGTATCGCAAATCAAACATTGCCAAGCTTT 15476 30 96.7 30 ............................T. AGATAAAGCAGGGGATAAAGGGACGTTAGC 15416 30 93.3 30 ............................TG TAATACTAGAATCTGTATATGCCAGCTCTT 15356 30 93.3 30 ............................CA TTTTGCGACGCGCTGCATCGTTTAGGGATA 15296 30 96.7 30 ............................G. GTCGGGTAAAACAAGGGTAATGACTTGTGT 15236 30 93.3 30 ............................TC TACAAAGGCAATCTGGCTCTTCAATTCGTG 15176 30 93.3 30 ............................TG ATTGCGGACATTTAGTCTGCTGTATTTCTT 15116 30 100.0 30 .............................. CGTGATCAAACCACATGCCTTCATCTTCAT 15056 30 96.7 30 .............................C TTTAAGCGCAAACGAACAGCATCAAGATCA 14996 30 93.3 30 ............................TG TTTCATCTGTCTTGATAGCTTCCCCCATAA 14936 30 93.3 30 ............................CA CTACGGACATAATCGAACATTTCCTGAAGT 14876 30 96.7 30 ............................T. GTGCGAGTGTCTACGAGCCAAGCCGAAATA 14816 30 96.7 30 .............................G TTGCTACTGAATTAGTTGTTATTGCTAAAA 14756 30 96.7 30 ............................T. AGGCTGTGCTAGGTATTCGTCTGGTTCCAT 14696 30 100.0 30 .............................. TAATATAGCTTCTTCCAACTACAATATATT 14636 30 93.3 30 ............................TA TTTGCTACGCCACCAGCCATACCTAGAAGC 14576 30 96.7 30 .............................A TAGAATTAAAACCACGTTGATAATATAGGT 14516 30 96.7 30 .............................A CGTCAATTCAAACGTAAAAAGCTACTGAAG 14456 30 96.7 30 ............................G. CAGTATTACTCCACACTTTTTATATTTCAC 14396 30 93.3 30 ............................TG TACCTCATCAATAAAAATAACTGATGTTTC 14336 30 100.0 30 .............................. AAAATCAACCCGTATTAATACCGAATGCAC 14276 30 93.3 30 ............................TA ATAAAGAGGTTTTTAACTGGTATGAATCGA 14216 30 96.7 30 ............................C. CATGACGATGCTTTTCTAACAAAGTCATCC 14156 30 93.3 30 ............................TG AAAAACGTAACGCTGAATTGCAGGCTAAAA 14096 30 93.3 30 ............................CA GCTAATAAATTTACAAGAATCTGATGTGTA 14036 30 96.7 30 .............................A CTGAAGTGAAAATTGTTCATTAATGGTTAT 13976 30 93.3 30 ............................TC ATAGTTAATATAAATTTATTATGACAAAAA 13916 30 96.7 30 ............................T. AGCCGTTTGGACTTTACCAATCTATATTTA 13856 30 96.7 30 .............................G CAATATCAATTACAGGAATACCACCAGCAT 13796 30 96.7 30 .............................A TAGAATTAAAACCACGTTGATAATATAGGT 13736 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 13676 30 93.3 30 ............................TG ATGCGGGTTGTCCACCAGTTATGACTACTT 13616 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 13556 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 13496 30 96.7 30 .............................G TGAATGGGATTTATTCGCAAGGTGATATTA 13436 30 96.7 31 .............................A AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 13375 30 93.3 31 ............................TG CATCGAAGTCATAGAACGCTTTGAGTTTCCA 13314 30 96.7 31 .............................G CGACTTTGAATTGATGCCATCTCCGCCTTTA 13253 30 93.3 30 ............................TA TTCAGATTGGCTGCGGCCTCACCTGTAGCA 13193 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 13133 30 93.3 30 ............................TC CATTCTCGCTAAGTGGCATCACACGCGATG 13073 30 96.7 30 ............................T. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 13013 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 12953 30 100.0 30 .............................. CATCGAAATTTAGTTCTAATTCTTTAATTT 12893 30 93.3 30 ............................TC ACTTCTCTTAATTAGTGCTGAAGAATCAAA 12833 30 96.7 31 ............................C. GAATAAGTGAGATGTCTCTATGAGTTCAATT 12772 30 100.0 30 .............................. TGAATTAATACGGCTTACTGCAATTGGTTG 12712 30 96.7 30 .............................G TCTTTAATGTCGGCAACATGCTGTGCAAAA 12652 30 96.7 31 ............................G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 12591 30 96.7 30 ............................T. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 12531 30 96.7 30 .............................C TGGAATTCAGCAGTAAATAAGGGGTTAAGA 12471 30 96.7 30 ............................T. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 12411 30 93.3 30 .......T.....................A CGTGAACAATTGTTTTAGCTTTGAACATTA 12351 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 12291 30 90.0 30 A......A.........T............ TTTGATCTTTACTTATTCTCGCTTCAAACA 12231 30 70.0 0 .......A...T.....T..C...AGCGT. | ========== ====== ====== ====== ============================== =============================== ================== 129 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.17, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //