Array 1 102109-102320 **** Predicted by CRISPRDetect 2.4 *** >NZ_HG427035.1 Xenorhabdus bovienii str. feltiae Moldova, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 102109 29 100.0 32 ............................. TTCTTATGCTTCGTATCCAGTTCCGTGTAGGC 102170 29 100.0 32 ............................. GCCAGCCAGCAGGTTGATTAATATTTCATTGC 102231 29 93.1 32 G...........................G GCGTATGGTACCGATACCGGAAATATGCTGGA 102292 29 82.8 0 G.A..........G.G............G | ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.0 32 ATGTTCCCCGTAGATACGGGGATAAACCA # Left flank : TACCCAGTGGTTCAGCAAGAGCAGTAAATCGAGGCAGTTCATACTTGATTTGCGGTCCCAGTAAAATCACATCGGCTTCATTGATATACATGTCCAACTCCAATGCGGGCACTGCCTTAATGGCGACTTCCAGCCCCCGTTTTTCCGCTTCCGCCTGCATACGCTGTACCAACATGCTGGTAGACATCCCCGCCGCACAACACAATAGAATGGTTTTCATGATTTTGTTCTCTTTGTTGTTGTCCCATTATGATTTCGTCTAATTCGAAAATGAGAGCGCTCTCATTTTAGTTAAGGCTAACAGGTTATTTTTCCGTTGCTGCGATGAGGTTCGCATAATAGATAAGCAATAGCTTAGAAAATGGACAAAATGCGATCAGCGTTGCAGATGATCGGTATGGCAAAAAATACGGCAGGAATTTGGCTGATTTAGGTGGTTAAAAAATGGTAGAATTTTGGAAGTCAAAAAAATTGTTATAAAACAGATAGATGAAATTAGA # Right flank : GGGTTCATATACAGGATCTTAAGCACCAACGGCTTAGTTTAGATACAAAAAAGGCTTCATTTATGATTTGATAATCGTCGCCAAACAAATCACCAAAATCACGGATGAAGCCGATGACGATTATTACTGTAAAACACCAATTAATGCAATTCTTTGCAAAAGATTGCCTATCGTTGTGGGTTTACTCGACGCGTGAGAAATGTTGGGCCACAAACTTTAATCCTCGCTCTTCTCACTACACTCAGTACCGGTGGAACGACTTTCTATTGCCCAGTTGCACCAAAATTCAATGGCATGTGCCCAGATAAAAAACACAATGTCAGCTACAGCCCCTTTTATAACTAATTGCGCAAGGCTGCCTTTACAGAGCTTGTCAAAATACGGGTACAGTTTACCATGACACAATTCATCGAAAAAATGTCATCTGTTCCTAAAAAATCACAACAATTTCAAAATATTATTTTGCAGGATGGCAATTCTTTTAAAGTGCATTCAGAACT # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGTAGATACGGGGATAAACCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTAGGTACGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.30,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5322-5472 **** Predicted by CRISPRDetect 2.4 *** >NZ_HG427051.1 Xenorhabdus bovienii str. feltiae Moldova, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5322 29 100.0 32 ............................. AGATACTGATAGTTAATTTCGTTCCAAGTAAT 5383 29 100.0 32 ............................. GCCATGATAATGATTTCCTCAAAATATCGTTC 5444 29 89.7 0 .......................T.C..A | ========== ====== ====== ====== ============================= ================================ ================== 3 29 96.6 32 GTGTTCTCCGTACATACGGAGATAAACCG # Left flank : TATAGTGTATTTCTCTTGTTGAGGTTTTATTGAAATAAATCTCATTGGGAGATGAAGTTAATATTATATTTGCATATTATTTTATATACATTATTGTTGCAAATAGAGAGTTAGTCATATTTCTATTTTTTAGATTAAACTGATTACTTTAATAATAAATAATGTTATTTATATTAATATGTATATAATCAATGTTACCTATAATAAATTAAGTTATTTTTAAAGTTATCCATGTTTTAATAAAATTAATCTATGTTTTTATTTTTTAATTAATATTTAAATCATGCTTATAATATATTTATATATTTATATATTTATATATTTATATATTTATATATTTATATGAAAGAGTATTTTTCGATTAAATATGAATGTTGACAAAATTGTGGGCGATTTTTGCTGGTTTTTAGGTTATGTTTAATAACTAGTTTAGCTCTTTAAAAGTTGGTAGAGTTTTAGGCTCTTAAAAAGAGCTTTTAAAACAAATAGATACTTTTAGT # Right flank : ACAACAAATTTTAGGATTATCTCTTGATTCTCATCCCTTATTCACTGGATAATCATTCGCCTCAAATTCTCTCTCCATTTTTTTACCTGAAAAGCCAAACGATTGCGTATAGAAGTGGCTGCACTAATGAGTACAGCACCGATTTTAAGTATCTTACGACGTAATCGTTTTCGTTAGGCAGAGTGGAGAGATGATAGCGTTAGAAATTCAACATAATGGCAGGGGAAAGACATGTCTGGCATGCAGGCACCAACTCAATGCAAACTCGATAAGTATTTTAAGATTACTGAACGCGGAACGACGGTACGTCAGGAAATTTTGGCTGGATTGACGACATTTCTGGCGATGGTCTATTCCGTTATCGTTGTGCCGGGCATGCTGGGGCAAGCCGGATTTCCTCATACAGCGGTCTTTATTTCTGTATGTTTGGTAACGGGTATTGGCTCACTATTGATGGGATTGTGGGTTAACCTGCCGATGGCGATTGGCTGTGCAATCTC # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCTCCGTACATACGGAGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTGTTCCCCGTACCTACGGGGATAAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.20,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //