Array 1 49269-51001 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBPN01000011.1 Streptacidiphilus jiangxiensis strain NBRC 100920, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 49269 29 100.0 32 ............................. TCGACCGGCGTGTCGTTCTCGGTGTCGATGAC 49330 29 100.0 32 ............................. ACCCACGGGGGAACCACCATGCCCCACACGGC 49391 29 100.0 32 ............................. TCGATCAAGCTGGTTGTTCAGTGGCTCACCGG 49452 29 100.0 32 ............................. TGCGTTTCGAACGTGCTCAGCTGGCCTTCGAT 49513 29 100.0 32 ............................. GGCCGTCGCGCCCACCGCTCTCCCGCGAATCA 49574 29 100.0 33 ............................. TCGGTGACCAACTGGGCGAACGTGTCGTCCTTG 49636 29 100.0 32 ............................. CGGCAGGCCTACGAGAACGGCTTCCGCCTGAC 49697 29 100.0 32 ............................. GCCGCCCGGGCCGCCGAGGCGGCGCCGTGACC 49758 29 100.0 32 ............................. AGCCACGTGGGCATCTACGCGGGCGGCGGCCA 49819 29 96.6 32 ....................A........ GCCGGCGAAAGCCCGGGCGCGCTGCAAGTCGG 49880 29 100.0 32 ............................. CACTGGTCACCGCGCAGCATAGGGACGTTCTG 49941 29 96.6 32 ...........................T. GTCCACCGCTCGCCGTCCCAACGCTCGACCAA 50002 29 96.6 32 ......T...................... CCGTCGGACCAACACCCAAATCCGGGGGACGA 50063 29 93.1 31 ................G.A.......... GGCCCCGGGGTAGGTCCCGGGTCCGGCCGAG 50123 29 96.6 32 ..............T.............. GTGGTGGGGCGGAACATGGTTGACCCCCTCTC 50184 29 100.0 32 ............................. TGGTCCAACCCGGTACGGCACTGGGCGTGGGA 50245 29 96.6 32 ....................A........ TACGCCGACCGCATCAGCCGTCTCGTCCTCCG 50306 27 89.7 32 .....T......--............... TCGTAGCCGATCGCGAACAGGTCGGCCCGCCA 50365 29 100.0 32 ............................. CAGGCCGCCGCCGCGCCCGCCGGCCCGTACTT 50426 29 93.1 32 ..............G.........C.... CTCGGACAGGACATCGCCGTCGACACCCGGCT 50487 29 100.0 32 ............................. GGGTCGCGTCGCACTCGGGAGACGTACGAACA 50548 29 96.6 32 ....................C........ GCGATCCCGGCCGCCCAGGCCGCGACGTAGGA 50609 29 96.6 32 ........................A.... AGGTGACGGGACAGGAAGCCCACCACGAGGAT 50670 29 96.6 32 ..............T.............. GTGAGCGCCTTCCCGCCCTTGCCGTCGCTGTC 50731 29 96.6 32 ..............T.............. GTGAGCGCCTTCCCGCCCTTGCCGTCGCTGTC 50792 29 96.6 32 ............................A CGACGACGGCCCGGAGGTCTGGGAGTACCGCA 50853 29 93.1 31 ........................T...T TGGCCACGGTCAGCGGGTGGTGGGCGATGTT 50913 29 93.1 32 ....C.G...................... CAGTGGCACAAGACCTGGAACGCGATCCAGCG 50974 28 93.1 0 .........-............C...... | ========== ====== ====== ====== ============================= ================================= ================== 29 29 97.3 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : GGGCGCCATCGCCCGCCAGCTCAAGGAGGTCTGCACGGCCAAGACCGCCGACGAGGCCGAGCAGCGGTTCGCCCGCTTCGAAGAGGAATGGGGAGAGCGCTACCCGGCCGTGATCGACACCTGGCGCCGCAGTTGGGAGCACGTGATCGTCTTCATGCGGTTCCCCGCCCCGATCCGCCGCGTCGTCTACACCACCAACATGATCGAGTCCCTCAACGCGAGGTTCCGGCAGGCCTCACGCCGCCGCGGGCACTTCCCCGACGACGACGCGGCCCTCAAAGTCCTCTACCTCGTGATCCAGAACCCGATCAAGAACCACGCCAACGTCACCGGCCGGACCCAGTCCTGGAAGCAGGCCATCAACAGCCTCGCCGGCTACTACGGCGACCGCGTCACCGACCGCTAGACCAGACCGAGCACCTGATCACCCACAAAGGATCAGACACTCCCGGCCCCGGGGATGGTCCCGCCGACCGGCGGCGTTCGTCCGCCGCCCTCAC # Right flank : CGGTCCGGTGGCCCGTCTAGCTAGGCTGCGGCATGTGGAGGCCTACGAGTATCTGGTCCAGCTCCGCGACGGGCAGGCAGGCACCTCGGACCTGAAGGTGATGGAACAGGCCCTGGAGCTGCTCGCGCGCGCCGCACCCGCTGAGGAGGAGGCCTGGGAACGCCGCAAAAGGCTGCTAGCCGAGCTCGCCCGGCTATCCCTCGAGTCGCCGCACCGGGACGAGACGCCCGAGTTGGCAGCGCTGAGCATCGTGGCGGGCAGGGCGGCCTGCACCGCGCGCCCGGCGGCAGGGCCCGTTCATGCCACAGCCTGCACCAACCTGGCGCTGGCGCTGCTCGCATCGGCCGACCGCGGCCACAGCGCGCCGGGCGAGGAGGAAGCGTTGCGGGACGAGGCGAGGGACTGGTTGGAGGAGGCGCTGATGGCGCTGCCGCCGGACGACCCCGACCGCTGCGCGGTGTGGCTCGACCTCGCCGTGGTCATCGGTCGGCGCGACCCCG # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.66, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //