Array 1 158776-163196 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXYP01000011.1 Williamsia herbipolensis strain ARP1 contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 158776 29 100.0 32 ............................. TACCCTGAACTCGCATGAGGTTGATCAGGATC 158837 29 96.6 32 ............................T TGACACACCGCGTCGGCGCATGGTTTTTGATC 158898 29 100.0 32 ............................. GAGCCGGCAATTGAGTCCGCAGCTATTCCGCG 158959 29 100.0 32 ............................. AGCTCGCACACGCATGGCGTGACGGACCTGAC 159020 29 100.0 32 ............................. ACGATCCGGCAACGGGGTGCGCTGCACGGTAC 159081 29 100.0 32 ............................. GTCGCGGCCGGAGCACCCGACAAGCGGGCAAT 159142 29 100.0 32 ............................. CCCTACTACGCGCGATGGGTTCAGGCGCTGAA 159203 29 100.0 32 ............................. GGATTCCGGCATCAGACCTCCCGCACATCCGC 159264 29 100.0 32 ............................. TTGACGCCCGTAAGCGATCCGTCCTGAATCTT 159325 29 100.0 32 ............................. GGGCGTGAGGTCAACCGCTGCTGTCGTCGTCA 159386 29 100.0 32 ............................. TGGGTTCTCGATCCTGGTTTCAACGGTGATCC 159447 29 100.0 32 ............................. GCATCCAGTCGTACGCCGGCTTCGCACGAGAC 159508 29 100.0 32 ............................. GGTGAACAGGTATCCGCTATGGGCGTGAATAA 159569 29 100.0 32 ............................. CGTTCGTCAACGACGACTGCCCAGGACGACAC 159630 29 100.0 32 ............................. CACGCCAGGATCGTTCCCTGAAGGAACGGCAT 159691 29 100.0 32 ............................. CGAAACATCCAAATCGGCCCTCGCGTCGCTGG 159752 29 100.0 32 ............................. GGCCAGTGGGGACGCAAGTTCGACCCTGTCGG 159813 29 100.0 32 ............................. GACACCAACACCGCGTCGAGCTTCGAGTCAGT 159874 29 100.0 33 ............................. AGACGCGAGGCGTCGATGTAGGTGGCGCGGTAC 159936 29 100.0 32 ............................. GACTCGACAGGAGACTGATCCATGGGACAGAC 159997 29 100.0 32 ............................. ACACGGTGGCGCTCGCAACCGCTCCGGGCCGC 160058 29 100.0 32 ............................. AAACATCCCGAAAAGTTGGCGCCCGTGCGGCA 160119 29 96.6 34 ............................A CTGGCCGTTCGCGAAGAAGCGCCTCACCGAGATC 160182 29 100.0 32 ............................. GTCTACACCGTGCGTCTGGCGGACAACAGCGA 160243 29 100.0 32 ............................. AACTCGACGTCGACGCCGGACTCGCTGATCGT 160304 29 100.0 31 ............................. GGGGAGGGGACGCGCCCGACTTCCCGGAACG 160364 29 100.0 32 ............................. AGCCCCCACGCGGACACCACATTGGGTGCCGT 160425 29 100.0 32 ............................. GCCGCGGTGTTCAACCACATCGGGAAGCCGAA 160486 29 100.0 32 ............................. TCATCACGCAAGGACGGACAGATGCCCGCCGG 160547 29 100.0 32 ............................. CCGCCGCCTGGAGGGCTGCACTCCTCCAGGCG 160608 29 100.0 32 ............................. TCCCAGCATCTCGGTGGCGTCCTTGAGCTCGT 160669 29 100.0 32 ............................. ACGGCCCCCTACGACGGTGGAGTGGAGTACTG 160730 29 100.0 32 ............................. AGGCTGATCATCGTGTACATCAGTGCCCTACC 160791 29 100.0 32 ............................. TCGACCTGGCCCTCCACCTTCCCGGTGCCTGG 160852 29 100.0 32 ............................. CAAGTATCAGGAGGCGGAGGACGCCAAGAAGT 160913 29 100.0 32 ............................. GCGGACTCCGGGTCGTCGTCGAGGAGCATTTC 160974 28 96.6 32 .....-....................... CGCTAGGAGGTCCGTTATGCCCGCTGACGTGG 161034 29 100.0 32 ............................. CATACGAAGATTGCCGCTCAGATGCTGAGTGC 161095 29 100.0 32 ............................. CGGCACGGCCCACGTGCTGTCGCCACGCAGGA 161156 29 96.6 32 .........T................... TGCGGGTTGATGCTTTGCAGCATCAAGCGCAT 161217 29 100.0 32 ............................. GAAATACCACCGATTACTCGCGCATCCGTAAG 161278 29 100.0 32 ............................. GGACCAGCGGGACAACCCCGGCGCCGTGCGGC 161339 29 100.0 32 ............................. CAATTCCTGTTGGCCTGCAACGGTGATTCGTG 161400 29 100.0 32 ............................. CGCTGGTGCGGGCCGTTGTCGCCGAGCACGAA 161461 29 100.0 32 ............................. GAATCGGAGGAGTGACCGCATGAGCAAGGTAA 161522 29 100.0 32 ............................. CGGACCGAAGCGACGCGTCTGTCTCAGTACGG 161583 29 100.0 32 ............................. ATAGGTCTGCTCCGGGGTGGAGAGGGCGCGCG 161644 29 96.6 32 ...G......................... GGTCCGCTTGCACTTCATGGCGATCGGGCCGC 161705 29 100.0 32 ............................. AAGGGGATCGACCTGATCCTCGAGACGATCAT 161766 29 100.0 32 ............................. CGGCGCGAAGTAGGAATACAGCAACGGTCCGT 161827 28 96.6 32 .................-........... CCACTCGGCGTGGGCGGCGGGTACAGCCTCAA 161887 29 100.0 32 ............................. CACGCCGCGGGCTCGGTGAGGTTGTTTATCAA 161948 29 96.6 32 .G........................... ACGGAGAGGTGAATGCTGGTGAATGCTGCGAT 162009 29 100.0 32 ............................. CGGCTGTCCCTGTAGGCCCGACCTGCGATGCG 162070 29 100.0 32 ............................. CCGGCACACCTCGAGTTGGGCACGCACGCCGA 162131 29 96.6 32 .......................A..... TAGGCCCGGTTGAGGGTAGCGGCGGGGTCAGA 162192 29 100.0 32 ............................. AAGTCGAGCATGGCGACGGCGCAGTTGACGAT 162253 29 93.1 32 ........A................C... CGACCGACGACTGGGGCTGGTCGTCCGACCGC 162314 29 93.1 32 .............T.......G....... GGCTCGCAGCACGGGTTCTACGTGCACGGCGC 162375 29 89.7 32 ....................A..AG.... AGGGCGCCGATCCCGAACGACCCGTAGGTGAC 162436 29 96.6 32 ...............A............. ACCCAGGCCGCCTACCGCCAGGACCTATGGGC 162497 29 100.0 32 ............................. GCGACCTTCGACAACGCCGAGGCCGCGCAATG 162558 29 96.6 32 ...A......................... TCGACGACGGTGGGGAAGGAGTTTCCAACCGA 162619 29 100.0 32 ............................. CATCGACCACACGCTTGAGTCGTCCAGGTTGA G [162640] 162681 29 100.0 32 ............................. CGACTACGGTGCGGTTCATGCGATCAGACGAC 162742 29 100.0 32 ............................. TACAGCTACACAGTGCAGGCGCTTGATGCTGC 162803 29 96.6 32 ............................G GAGGTCAGCGGCCGGTACACCCAGCTGGCCAA 162864 29 100.0 32 ............................. TCAAGCTCAAGCACCCCATCGGATCGAAGGTG 162925 29 100.0 32 ............................. ACGCTGATCGGCACGGCCTTCTCGAGAGATGA 162986 29 100.0 32 ............................. GGCGAGTCGCTGACCGACGTCGTGCGTCGTGC 163047 29 89.7 32 ...A....T...............C.... GAGTTCTTCGGGCAGGCGACCAACGGCGGTGC 163108 29 89.7 30 ...T..G................A..... CGGTCACGGCGCTGCTGCGATCCTCAACGG G [163135] 163168 29 86.2 0 ..C.......A.C.......C........ | ========== ====== ====== ====== ============================= ================================== ================== 73 29 98.7 32 GTGCTCCCCGCGAACGCGGGGATGAGCCC # Left flank : TGTATCTCTGGGACGACCGCGGTCCTGCAATTGCGAGCGGTCAAAGCCATTCCACCCAAGAGGATTTCGAGGTGCCATGGTAGTTCTCATCGTCACCGCGTGCCCAGCTGGCCTGCGTGGCCACCTGACCCGGTGGCTGCTCGAGATCAGTCCCGGCGTCTTTGTCGGGGTGTTGTCCAGGCGCGTCCGCGATCTGCTGTGGGAGCGGGTGGAAGAGCTCGTCAAAGACGGCCGCGCGATCATGGTGTCGAGCGCGCGCAATGAGCAGCGATTGGATTTTCGAGTACATCGATACGACTGGGAGCCCGTGGATGTCGACGGAGTTCGGGTTGTACGGCGGCCTCACACAGGCGAGGCTCTTGCTTCGGCTGCAAAGCCCCGTGCCGGCCGAAGTAAGGCGAGCCGGTACCGCGCGGCGCGTCGTACCCGGCGAGGTGAGAATTCGAGAGAGTCCGATTGATTTCGGAGATGATGAGCAGCGAAGGGCCAGCTCAACAAGT # Right flank : CGGGGCTGACGGACATCCGCCTGTCCAGCTGACCGTCCCGGGAATTTAGCTGTCAGCCGCGCACTGCGTATGTCTTCGTTTGATCTCGACGACTACTTGGCGGCACGTGCCCCGCTGGGTTCCTCGTCCACCGGAGGCCGCAGGTTCGCCCTGCCCGACCGCGGGCTGCAGGTGATGAGCTCCGACGACACCGTCATCGTTGCCCGCCGACGCGCGTGCCCACGGGCCGCAACGCCACCGTCCGGCTCGGCGACGTCCAGGTGGAGCTGGTGCAGTGGGACGAGACCTGAGGTCTCAGGCCGCGCGTGCAGCCGCCGGCGCGGTGATCCCGCGACGGTCGAGGATCGGGCGGACGCCCTCGGCGAAGTGATAGGCCTCCTCGAGATGCGGATAACCCGAGAGGATGAACTCGGTGAACCCGGCGTCGTGGTACTCGCCGATGAGGTTCGCGACCTCCTCGTGTGACCCGACGAGCGCGGTGCCCGCCCCGCCACGGACGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGAACGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-31] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //