Array 1 182172-178900 **** Predicted by CRISPRDetect 2.4 *** >NZ_UCRT02000038.1 Acinetobacter baumannii strain J2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 182171 30 96.7 30 ............................A. TTAAGCCATTTTCTTTTGTGAATCCTAAAG 182111 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 182051 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 181991 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 181931 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 181871 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 181811 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 181751 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 181691 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 181631 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 181571 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 181511 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 181451 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 181391 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 181331 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 181271 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 181211 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 181151 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 181091 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 181031 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 180971 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 180911 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 180851 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 180791 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 180731 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 180671 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 180611 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 180551 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 180491 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 180431 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 180371 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 180311 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 180251 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 180191 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 180131 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 180071 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 180011 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 179951 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 179890 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 179830 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 179770 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 179710 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 179650 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 179590 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 179530 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 179470 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 179409 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 179349 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 179289 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 179229 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 179169 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 179109 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 179049 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 178989 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 178929 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 55 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //