Array 1 1926-1472 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZVP01000052.1 Pseudomonas sp. URIL14HWK12:I7 H032DRAFT_scaffold00041.41_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1925 28 100.0 33 ............................ CAGGTGCGCCCCTACGCGGAGGTGATCAAGAAG 1864 28 100.0 33 ............................ CCAGAATCAGAAAACGCAGCATCTGAGGCGATG 1803 28 100.0 33 ............................ CACGACCGGTGAGCACGTCGAGGATCCGAAGCG 1742 28 100.0 33 ............................ TCAAGAAGGTGTTGCCATAATGAAACCGCGATA 1681 28 100.0 33 ............................ CTGTCCACCTTCTGCGGCCGAAAAAGACGGCGG 1620 28 100.0 33 ............................ CTTTGCGCTGATCTTTACGGCCCGCGTGCTTTT 1559 28 100.0 33 ............................ TTACACGCATGGAGGCGTAGCCGCCCGGCGGGA 1498 26 92.9 0 ..................--........ | T [1496] ========== ====== ====== ====== ============================ ================================= ================== 8 28 99.1 33 GGGTCATCCCTGCGCGCGCGGGAGTCGG # Left flank : ACATGGCTTGTGCGCAACTGTGACGTGATCGTTGTAGAATCGCTCAGTATCAAAGGAATGCTCAGAAGCGGTCGTTTTTCGCGTCACATTGCCGATGCGGCATGGGGAACTTTTTTCCAGATGCTCCAGTACAAGTGTGAGCGGTATGGGCGCACCCTGCTCAGGGTAGAGCGTTCTTATCCGAGCAGCAAGAAGTGCAGCCGTTGCGGTAAGATTCGAAAGGCATTGTCACTATCGGAACGCACGTATCGGTGTGATCAGTGCGGACTGAAGATAGATCGTGACGAGAACGCTGCGTTGAACTTGATGAAACTCGGGTTGGCTCACCTTACGAGCCCTACCGCCAGACTGGCGGGAAGTGACGCCGGAGGAGATACGATCGCGGGTGGTGCCGCCGCCTGCACGTAGACGGTTGCGGCATTGGAGCGATCGGCCCCGGAATCCGTGCTTTGCAGGGAGAGCCCCGCGCGCCGACCGCTGGTGTGCACACCTTGCGCAGC # Right flank : TATAGCCCGCCCCGATCAGCTCCGGATGGCCATCACCGTCTAGGTCGCCGGTGGTGATGCCCAGGTTCGTCGGGCCCTCCAGCAGCGGAAAGATGAGCTGATCGGTAGTAATCTCCAGGGGGTTTTCGCCACTTTCGTAGTTCAGGACGGCCAGTTGCCCGGTGTAGAAATTCGGATAGAACACCTCATCGTCCCCGTCGCCATTGATGTCCACCACCACGCCGCCAAAGAGCGCGACGTGGTCGCCACTGGAAGCGCGCACATACACGTTCTGTGCGTTCGCGTCCGGAAACTGATACTGATCCGGGCCGAGCACGTCTCCGTTTGTGAAGTTAAAGTTATTCCACGAGTGCATCGACAGTTCATACGTACCGTCGCCGTCCAGATCGGCGGGTAGAATTGCATAGGGGCTGCCACCGCCACGATTGACCGGATCAAAACCCTCTGACGCGCGGCTGCTGATGCGCGCTTCCTCGACCCATACTTCAAAGCCACTTCCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGTCATCCCTGCGCGCGCGGGAGTCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.00,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 1485-4676 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZVP01000056.1 Pseudomonas sp. URIL14HWK12:I7 H032DRAFT_scaffold00045.45_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 1485 30 100.0 36 .............................. TGTAAATTTCAATGGTTATTTTTGCCCGGAGATGCA 1551 30 100.0 35 .............................. GTTGGTTCGATTGTGGTGGATAGGGCTTCTTTCGC 1616 30 100.0 38 .............................. AAGTGGAACCCAGTCGAAGGTTTTCCCGACCTGGCCGG 1684 30 100.0 39 .............................. TCATTGCTGAAGGCATGGAGCCGGGGGACAAAATTACGG 1753 30 100.0 36 .............................. ATCGAAGTTATTCGCGCGTCATTTTCCCGCCGCCGG 1819 30 100.0 37 .............................. ATGCCGATGGGAACACGCTCTACAGCAAATCCTACTA 1886 30 100.0 37 .............................. CGAATTCTGCCTGTTGTACAAAGCAGGTCAAGACCCG 1953 30 100.0 35 .............................. ATGTACACCCAGATGGGGAGCGGGCTCGGCATGAG 2018 30 100.0 36 .............................. GACGTGGGAAATCCAGAACGAAACGTGCGAAGAAGG 2084 30 100.0 36 .............................. TACAGGTATCAGCGGAGGACATCAGCGGAAACGAAA 2150 30 100.0 37 .............................. TACAACAACGTCCGATCAATTCCTTGCTGGTATGCAA 2217 30 100.0 35 .............................. TCTTTTATTCCTGTAAATTGCCCAACGGTTTTGGG 2282 30 100.0 39 .............................. TCTTTCAACCCGGTTACAAGTGCCTTGGACAGTCCCATG 2351 30 100.0 39 .............................. TGAGGGGGATATTCTGGATGTGGATGGAACGCCTTGGCT 2420 30 100.0 38 .............................. TCACGACTTGCGCGGCCCATAGTCGTCCAGCACCTTTT 2488 30 100.0 38 .............................. CAGTACGCCGTCAAGAAGAAGGAAGGAAATATAATAAC 2556 30 100.0 39 .............................. TATCCCGCGTGATCCGGCGCGGTTTCTGCACAGAAAGGA 2625 30 100.0 35 .............................. TCGTCTTCCCGGAATTCTTTGATGCCGTAAGTCAG 2690 30 100.0 36 .............................. TCCCTGGAGCCCCTGCGGATTTGAACTGGTTAGAGT 2756 30 100.0 38 .............................. CACCCCCCTCGTCTCCGGCGGCTTGCAGGGCGATTTTT 2824 30 100.0 38 .............................. TCAGGAGTATTGCAATCGTTACTTGGAGCCAGATGATG 2892 30 100.0 39 .............................. ATTTGATAAACTCCAACACCGCTTTCTTGCTCAGGTATT 2961 30 100.0 36 .............................. TGGAGAATTGGAATATGTCGTTGCCGCGAACACCGA 3027 30 100.0 36 .............................. CAGCGTCTGCATATGGTATCCACAGAGGGCCGTACA 3093 30 100.0 39 .............................. TATTTTTATAACCACATTCACTACAAATTTGACTTGAAG 3162 30 100.0 39 .............................. ATCTGTTCTTCTGTAAATCCGGCGTCAAGCAGAACCTTC 3231 30 100.0 37 .............................. TACCATGCGCTTTCGAATTTATGAGGATTCGCTTTAG 3298 30 100.0 40 .............................. TTCACGTCGAAGTAGTCGTTCAGCAGAAGATCGATCGCCG 3368 30 100.0 38 .............................. GCAACCTGTCGGCACCGAACATCAAATACGGAGCGACC 3436 30 100.0 39 .............................. ACGGCATGCGCACAGTAGACGTTTCCTGTCGAGTCTACC 3505 30 100.0 41 .............................. CGAAAATCCGGCCCCGCGTCCGGGAAACGTGGGGCAAACCG 3576 30 100.0 37 .............................. TCGATGCTGCCTTTGCTGTCGCAAACCCCGTGCTTGG 3643 30 100.0 39 .............................. GAACTCGTCAAACGTAAGATGGAAGAAGGCGGGGTCCTG 3712 30 100.0 38 .............................. AAAGAGTGCTTTCAGGCGTTGCATTTCAGACCACCCCC 3780 30 96.7 36 .............A................ GACCAGACCTCATTCCCGGAACTGTCCAGCTTTCGG 3846 30 96.7 40 .............A................ GACCAGATTTCGTTCCCGGAACTGTCCAGCTTGCGAATGG 3916 30 100.0 37 .............................. GCGTATTTCGGACTTCGAGCGCCGAAAAGTGTATCGG 3983 30 100.0 35 .............................. TTCGCCGTCCAGCATGAGCATATAGGCTGCCAATG 4048 30 100.0 34 .............................. ATCGCGTTTCCTGTGCAGTACGCGGCGCCGCCGG 4112 30 96.7 35 .........A.................... GTCCAAAAGGAATACCATTTGAAGAAATTGAATCA 4177 30 100.0 38 .............................. CTGCGTCCGGCCCGCGTAGTTGAACGCCTGGCCGACGA 4245 30 100.0 38 .............................. AAGGCCACGGGGGAAGTCGGGCGGGTAAAGCTAACCTG 4313 30 100.0 36 .............................. CCGTAAACGAAATAGTCGATGGTAGGGATTCGGATG 4379 30 100.0 37 .............................. TCTGATGACATCGTGGAAATCCGACTGATCGAAGAAC 4446 30 100.0 36 .............................. TAAGGTCGTAAAGACGGGCTGGATGCGGTCGAACAC 4512 30 100.0 37 .............................. TGGTCGCGGAGTACCGCGGTGCCCACGGAGAAGACGG 4579 30 96.7 38 ................A............. ATAGTCGTTGGTCGTCGCCATTACGTTCCCTCCAGTAT 4647 30 96.7 0 ............................T. | ========== ====== ====== ====== ============================== ========================================= ================== 48 30 99.7 37 GTTTGGATCGTACCTATGAGGAATTGAAAC # Left flank : GAGGCGCTATGGTAATGATATTGTGCAGGCGGGAGGGCATGTTCGTTGTTTGTCGTTCTGGTCTATGATGTCGGGGAAAAAAGGGTGGCCAAGGCGTTGAAAACGTGCCGAAAATATCTGAACTGGGTGCAAAATTCGGTCTTTGAAGGTGAAATCAGCGAGGTCAATCTGAAAAAACTGAAAGCGGAAATGAAAAGAATCATGAATTTGTCAGAGGATTCTGTGATCATTTACACATGGCGAACGCAGAGATACAGCAGCAGGGAAATCCTCGGAGTCGAGAAGGGGCCGATTGATTTGTTTGTTTAGGTTGATTGAGGTCTGGTTTTGGAATGTCGTCGACCCCCGATCGTGCAAAAACCCCCGGGGGTCGACGACAAGTCGACTGAGCCGGAATGGTATGTTATCACAAGATTTTTGTGATATGATGAAAAAGAAGCAAGCTCACAGAATATGCGCAGTTGTTTGATCACAGGGTTGTAATGACGGGGATTTTTGGG # Right flank : CGACCTGACCTGACGGTTACCACCGGGGATTGCAACGAATTTGAGGGGAACCAGCGGCGGTAAGCCGATGTCGATTCGGAGAGGCACTAAAGATGGCAGCAAGTGGGATGGTTTGAAAGTGGACTATTCCCGCTTTAACTTTGATTGCGTTACTTTGAGGAGAGCGAGAAGTGTGCCTGAGGGTGACTGCAGGGTGGCCGTCACTTCGGGGGCTTCCACGCCGACGCTGATCACAAAGGAAGTGATTGGCTATTAGGAACAGTTCGAACCGGAAAATCCCGAAACATGGCCGATCCGTCGAACGGTCAATCTGGACAGATTACTTCCCGGAAAAAAAGCATAGAAATAGCGTGGCATCAAAAAGAAGCAGAGGGCTGTCCCGCAAAGTTATCAAAACCAGAAGGGACAGCCCGAATTGTTTGTGGCGCCGGTGTGCCGTATGGATGCCGCTGGCGCGCGGTGATTTGCCTTAAAGTGCAGCTTGCTTCTCAGGGGAATTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 25-984 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZVP01000067.1 Pseudomonas sp. URIL14HWK12:I7 H032DRAFT_scaffold00056.56_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 25 30 100.0 38 .............................. ATCTTCGATCTTATCGACGAGACGGCGCCGGTGAACTG 93 30 100.0 37 .............................. CTCTGCGGCTGGTAGGGGACAGGCAGCGCCACACGCT 160 30 100.0 35 .............................. ATCTGAAAAGCACGGGCAATCTGCTGGTCGACGTA 225 30 100.0 38 .............................. TCGGAACGCGGGCGTAATCGACCACCTCAGCCCCGACC 293 30 100.0 36 .............................. CGAAGCGGTAGCCGCGCCCGCTGGCGATCACCTCGG 359 30 100.0 35 .............................. TATGTTGGCCTCCGACTGGCCCACGAGCGACCCTT 424 30 100.0 35 .............................. AGGTCGCGAACAAGCTCTTGCGCAATGATGGTCGC 489 30 100.0 37 .............................. AGCTGCTTTGCAGCAGCTAGGACGATGGACGACACAA 556 30 100.0 36 .............................. ATCAGGTGGAGGATTCGATCGAGGGGTGGTGCTCGG 622 30 100.0 36 .............................. TGATCGATGCGACGCGCAAGGGCCACCCGCTGCACA 688 30 96.7 37 ..................A........... GCAGGGACGCGCGGCGCTCAAGTACCAGCGAAGGCCG 755 30 96.7 38 ..................A........... ACGACTTGGCACGCCTGCGGGGCGCCAGGCTGGTAACG 823 30 96.7 36 ..................A........... GGGGTTGATTATGATATTGAAAGAAATGACGATTCC 889 30 96.7 36 ..................A........... GATCCTGCAGGTGTCCAGCGTAGCAGGTTCCGTACT 955 30 96.7 0 ..................A........... | ========== ====== ====== ====== ============================== ====================================== ================== 15 30 98.9 36 GTTTTAATCGCACCTTTTTGGTATTGAAAT # Left flank : GAGCCGGATCGTCACCACTCTCAAG # Right flank : TAAAGCCACGGATTGGCTAATCTTGAAAAAGTTGGAGCGATAGGGGCGAAGGGGTTACAATAGGGCCCCAATGGTGTCTTTTAAATAAAGCGACCGCTGCTGAAGTAGTACCGACCTCTGCTGTATGTATCATCAGGAGCGTGAAACGCTGTATCTGGGAGCTCTCCTGCACGATCTGGGGAAATTCAGGCAACGAGCCCATGACGAGCGTACCAAACATGCGCTCATCTCTGTAGCGATCATTGATCGGCTAATAGGCACGCGAACAGATGCAGAGCAAATCAAAACGCTTGTTTCCTATCATCATCGGGAAGACCTGAGCCAAAGCGGGCTGCAAGGACGTTTGCGTAAGCTGGCCGAAATTGTCTGTGAAGCCGACTCGCTGGCCAGTGGCGAACGTAATCCCGATATAGAGCAGGCGCAGCGACCGCTTGAGAGTATCTTCAGCCACGTCCGGCTCGAACAATCGGCAGGCGCATCACCTCAGGTCGCCTGGCAAC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGCACCTTTTTGGTATTGAAAT # Alternate repeat : GTTTTAATCGCACCTTTTAGGTATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [16.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 2 5662-2963 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZVP01000067.1 Pseudomonas sp. URIL14HWK12:I7 H032DRAFT_scaffold00056.56_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 5661 30 100.0 35 .............................. TGAAGCACGCAAAACTCCTTCTGTTGCTGGCCGCC 5596 30 100.0 37 .............................. TTGACAATGCCGATGTGGGCGCGCTGGCCTACATCAG 5529 30 100.0 36 .............................. GCAGGAACACCATGCTGCGGAGTGAGCGGATATTGG 5463 30 100.0 38 .............................. ACAGGAAGGCAAGCTGACTGTCGCGATCCTGCAGGCCT 5395 30 100.0 37 .............................. GGAGCACAGTTTTGTGCAAGCACCCGGCATATACTTC 5328 30 100.0 39 .............................. GGCGTACCGCTGTCGCCGATCCTGTTGCGTGAGCGCATC 5259 30 100.0 36 .............................. TGTACGACAAACGGAACTTGGCCCTCACGGCGAGCG 5193 30 100.0 37 .............................. GACGGCGGCAAAGAAAGAATGACATTGCCGCCCTCAT 5126 30 100.0 36 .............................. GGGTAGAGGCGCTCGTCCTCGTCCAGGACATAGACG 5060 30 100.0 36 .............................. GTACAGATATTTCAGAGTCCACGATCCACAGATAAT 4994 30 100.0 36 .............................. ATTGAAGAGCATCGGCGAGATGCCGTACGTGTCGGC 4928 30 100.0 43 .............................. GCACGTAAGAGGCATGAGAAAAGGAAGTATAACCTTCAGGCCA 4855 30 100.0 37 .............................. CGTGTATGCCTACGAGGAGCTGAACTCGTACTGGCAG 4788 30 100.0 35 .............................. CTCCGAAAGAAGTTACTTCCTCAGTACAAAGAGCA 4723 30 100.0 37 .............................. CTGGCCCTCGATCTGTACGCTTGGCTTTCGTATCGGG 4656 30 100.0 37 .............................. AATAGCTGGTACGGGGAACTGAACTTGGCGAGGATGC 4589 30 100.0 38 .............................. TACAGCTCCGACTGCAGCACGGCCGACAACCGCGCCCG 4521 30 100.0 35 .............................. CTTGGAAAAAGTCTCGGTGGGTGATCGGCGCGTAA 4456 30 100.0 38 .............................. CCTGAAAGCGCAAGGCCAGCTTCGCTACTGGCGCAACA 4388 30 100.0 35 .............................. TTGCATAACCTAAAAAATGAACGCTATCCTTTAGC 4323 30 100.0 37 .............................. GGAAATACTGTTTGTTCAACTTTCTGGCAAATTGCTC 4256 30 100.0 35 .............................. GCGGTAATTACATCTGGATCGATAATGGCTTTTAC 4191 30 100.0 39 .............................. TATATTTCAACAACCACCCCTCTTTCTGAAGGGAATCCA 4122 30 100.0 35 .............................. GATAGGGTGGCAACACCTCGCGGTAATCCTGCGGG 4057 30 100.0 37 .............................. GTTGCCCGAGCCGGGCTGTTTCTTTTCACTCGTTGTG 3990 30 100.0 36 .............................. GCGCGTAATGCCGGGCTGGGTGTACATGTCTCCCGA 3924 30 100.0 37 .............................. TTCGCCTTCCGTATGCCGCACCAGACAACGGCTTGCG 3857 30 100.0 37 .............................. TGCAGCGCCTCTACGGCTGGTCGTGGCGCAAAGCGCG 3790 30 100.0 37 .............................. ACGTCGCCGCCATCCTGGCCGCCTACCGGACGATCAA 3723 30 100.0 37 .............................. GGCGAAAACTATCGTCATCTGGGGTGGCGCTTCCCGC 3656 30 100.0 37 .............................. TTACGTTCAACGTCACGCGAAAATCCACGGTCTTCCA 3589 30 100.0 36 .............................. AATCATGGCGTTGGATTACGCGCAGCGCGTCGTCGC 3523 30 100.0 38 .............................. CTGGACCGAGACGCCGACCGACCAGCGATTGAAGGCCG 3455 30 100.0 38 .............................. GTGACGGGCGCCATCGAATGGCTTGCCCAGGATGGCGT 3387 30 100.0 35 .............................. ACCGCCCGCGCGTGGCGATCAGGTGCTCGGCCTCC 3322 30 100.0 37 .............................. CGAAAAATACGATAGCTTTCATGATGCCCTCCTTCGG 3255 30 100.0 34 .............................. ATTGGATTTTGTCGGCCAGCGGTCCTTCGGTAGA 3191 30 100.0 36 .............................. GCCAAAGCCCAAGGTCGACTGTCTAAAATCGCAGAG 3125 30 100.0 38 .............................. GGCAGAGACGATGAAAAAGGCCGTGGACTACGAGTTCA 3057 30 100.0 35 .............................. GAAGTGACCGAGAGCCGGATCGTCACCACTCTCAA 2992 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =========================================== ================== 41 30 100.0 37 GTTTTAATCGCACCTTTTTGGTATTGAAAT # Left flank : TTCAGTACCCAGCACCAGACGCCGGCTGTAACGGACGTCGCGCAGCTCGTAAAAGATGACCACGTCTTCGTCGGGGTTCATGAGCCGGCCGGCTTCGTGCTGCAGGCGCTGAAACTGCGCTTCGGTCAACTCGCCCTCGAAGACGGAGCGCTGCACCCAGGTCAGATAGCGCCGGAAGAGCTTAAGCATTTTGGCGACGCGCCGCACGTTGACATCGTAAACGGCAATGTAGTACGGCATCGTAACCTCCTGTAATTACGTGAGAAGTGCCCTGACTGGCGTCGTCGACCCCAAGATAACGAACTGAATTCGGCAACGCAAATGATAGGTAAAAGAAAATCTGTTGTTTTATTTCTTTTATTTTTAGCAGTTTAATAAAAGTTGTCGGACCCCCGGGGTTTCAGGGGTAACCGGAGGTCGACGACTCCGGGGACTTGACATTCCGGATCAAATCGCTTATAATACCCTCCAGAAGCCGGTTCTGCTCTTTGAAAGGCCGG # Right flank : ATCTTCGATCTTATCGACGAGACGGCGCCGGTGAACTGGTTTTAATCGCACCTTCGCCCTTTGCTTCTACAACCCCTTGCTCTGTCTGCCAGCGCAGTTGCTGCAGGCGATTCAGGTAGCCGGAAAAGAAAAAGTCCATCATGGTAGAAAGCTGCACCACCCGCGAGAAGGTCGCGTCCTTCCCCAACCCATCCCGAAAGATGCGCCCTAGGTTGTCTACGTCCATGCGCAGCGCGCCCAGTAGCTTGCTTCCCTGTGCCTTTGCGGCCACCTCGTTAAAATCGCCTTCAAACGACCAGTTACCGGCGTAAAAGTGCCAGCTCTGAGGCAGTGTATGTTCGCGCAGTTGTTTGGGATCAAACCATATAAGCTCCCGACTCAGGTCGAAAAAGCCGGGCGAAGCGGTCGTATTGTTTTCCAGAGAAGGCGTTTGGGTATGAACCCGAAAATGCCAGCCATTAAACAGCGCATAGCCCTGCTGACCATCTGCTTCCCGGATA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGCACCTTTTTGGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.40,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA //