Array 1 118458-113823 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARLY010000006.1 Oleiagrimonas sp. C23AA NODE_6_length_297371_cov_227.139, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 118457 32 100.0 35 ................................ CTCTAGGCCATGAAATGCCATCAAAAGCCATAGTG 118390 32 100.0 34 ................................ ACCACTGCAACGGCAATGGAGCCAACCGCCTCAC 118324 32 100.0 34 ................................ TCTCCAATGAATCCATGCCCGTGGTGCTGGAGCA 118258 32 100.0 34 ................................ ATTAATGACCGCCTGGCCGAAGTGTGGGAAGACC 118192 32 100.0 35 ................................ GGCAGCTTTGGTGCTGGCGGGGTTCGAGAAAGAAG 118125 32 100.0 35 ................................ GCTCTGCGACCGCATCGATCATGGCGCAAGGCCAG 118058 32 100.0 35 ................................ AGGACGGACTCACCGATATCTCAAAAACTCTGCAG 117991 32 100.0 33 ................................ GCTGTGTTTGATATCAGATGGCAGCGGTGCGCG 117926 32 100.0 34 ................................ TCCACCTGCACAGCGCTTGATATCCGCGATGGCA 117860 32 100.0 34 ................................ ATCTATGCTCATGGGCAAAAAATTTTGCCCTCAG 117794 32 100.0 36 ................................ TCCCTGATTCGGAAATGTCGGTGCACATCAGGAAGG 117726 32 100.0 33 ................................ CAGTCTTGCGCTGGCGCGTGGCTGATCCCTGAA 117661 32 100.0 35 ................................ ACGAAGCCGCGCCGCGCGACACATTGGCGCAGCTC 117594 32 100.0 33 ................................ GTTTGACTAGCCCAGGCTGTACCTTTCCGCCTG 117529 32 100.0 36 ................................ TGCGATGTAAGCGGCGGCCTCTGCGTCACTGGGCAG 117461 32 100.0 36 ................................ ATACCGCCGACCCGCTGACATCGCCTGGAGCCTGAT 117393 32 100.0 36 ................................ CTTGTTTCGAGACGAACTGATGCGCCGCCGCTACGG 117325 32 100.0 36 ................................ ATTGAGACGCAAATTGTTCGTTCGCGCCGGCACCGG 117257 32 100.0 33 ................................ ACCCTGGTTTGCGCCATCGCCTCGTTCTAAGGA 117192 32 100.0 37 ................................ GCCATCACCTCGGCCTATGTATCGCTGACATCAGGAC 117123 32 100.0 34 ................................ TACGAGTGCATGCACCTGTTGGGCCTGGCTCCGG 117057 32 100.0 33 ................................ GACGACAACGCGCTGACGCCGGCCGACCGCCCG 116992 32 100.0 33 ................................ ATCGTGCAGTGCGCCAACGCATCGGCCAATGGT 116927 32 100.0 35 ................................ TTCCGCCGCACCATCGAATCGCGCGGCTACGCCGG 116860 32 100.0 33 ................................ ATCTATAAAGCTTCGGTGAAGCGCTGGGAACAG 116795 32 100.0 35 ................................ GGCTGCTTTCGGAAGGGGGGAGGCTTGCCACGACG 116728 32 100.0 34 ................................ GCCCTTGGCGCCACTGCCCAGGATCGCATCCTGC 116662 32 100.0 36 ................................ ACCGCCTGGCAGCGCGGCTGGCGCGAGCTGCAGGTG 116594 32 100.0 35 ................................ GCCCTTGGCGCCACTGCCAAGGATCGCATCCTGCA 116527 32 100.0 36 ................................ ACCAACACCGATGCCAGTGGTGCCAATGCGCTGTGG 116459 32 100.0 35 ................................ AGCGTCACGACGGAGCGCACCGCCTACGACAACGC 116392 32 100.0 33 ................................ ACTTGAAACACTTGTATTTTCCGCGTACTTGGC 116327 32 100.0 33 ................................ CTCCGAGACGATGCCGGTGTTGCCTGAGGTGAC 116262 32 100.0 35 ................................ TGCATGCGGATGCGCTCGGAGCGCGAGATGCGGTG 116195 32 100.0 33 ................................ TACATGTCCACGCCCATCGACCGCACCAACGAC 116130 32 100.0 36 ................................ CGGACGCACATCGTGACTCGCACCAGCCTATATCTC 116062 32 100.0 33 ................................ CCTACAATGGCGCAGTTCGCACCCAGTCAGCAC 115997 32 100.0 35 ................................ CTCCTGTTCGCGTTCGGCGATGTAAGCGGCGGCCG 115930 32 100.0 34 ................................ CAGACGGATGTCGTGGGCCAGTTTGGCCAGCAGG 115864 32 100.0 35 ................................ CCGCGAGAGCACCGCCATCTACACGCTGCCCGACG 115797 32 100.0 35 ................................ TCCATCCTGCACGCCTACAACGCCACGCTGGGCCG 115730 32 100.0 35 ................................ CCTTCACGATCAGCGATCAGGTTCGGGCACGCCTG 115663 32 100.0 34 ................................ TACGTGGACCGCATGCACGTGCAGCGCGCCCGGC 115597 32 100.0 37 ................................ GTCGGTACCGTAGCCGCGCGCCAGGTGGAAGCCACCG 115528 32 100.0 35 ................................ GACATCCCGACCGAACGGCGCGACAACGCGGCACG 115461 32 100.0 35 ................................ AGATCCTGATAGGTCTCAAGGATCACCTGGCGCTG 115394 32 100.0 34 ................................ AGCCCGCGTGCCATGCGTAGGCAGGCGTCCTGGT 115328 32 100.0 36 ................................ ATGGCCACCTGGCGCGCCCTCGCCGGCGACGACGGG 115260 32 100.0 35 ................................ CACCTGGACGTGGATGACGCGGACTACCTGACCTT 115193 32 100.0 35 ................................ TGCATGCGGATGCGCTCGGAGCGCGAGATGCGGTG 115126 32 100.0 34 ................................ TACGTGGACCGCATGCACGTGCAGCGCGCCCGGG 115060 32 100.0 35 ................................ GCCTCGCACCTTGCCCATGCCGCCCGACCGTGTGG 114993 32 100.0 35 ................................ AAGGCCCAGTCGCATGGCCAGATCGTGCAGATCGA 114926 32 100.0 35 ................................ GCTCCAGGTAGCCGTCCTTGCTGACGCGCTCGGCG 114859 32 100.0 36 ................................ CTGTGCCATGCCGGCAAAGTCGGTGATCAGCGACCG 114791 32 100.0 38 ................................ GCGCTTCATGCCGCCGCTTCCAGCGCCGCCATGGGCGG 114721 32 100.0 35 ................................ ACTTCGAGGCCGCCGAAAAGGCGGCCAGCGAGGCG 114654 32 100.0 35 ................................ CACCATGTGGCTGCTGCTGCCGCCCGGCTCATATG 114587 32 100.0 34 ................................ CGTTATGTAACGGAGTAACGCCGTTACTATCTTG 114521 32 100.0 34 ................................ GCGCACCATGGTCTGGAAGCTCTCGCGGTCGAGC 114455 32 100.0 35 ................................ TTTGACGCCTCGTAGCGGGCCATGATGGACTTGGC 114388 32 100.0 34 ................................ ATTCACCAACCGCATCTTTCGCCCTGTTCTTGGT 114322 32 100.0 33 ................................ CTCGAAGGCGACGTGCTCAAGCGCATCACGCGA 114257 32 100.0 36 ................................ TTCCACGGTGTGCAGATCGTGCGTGACCCGTCTGCC 114189 32 100.0 35 ................................ ATCGCCGCCTGCCTCGGTAACCTCGGTATCAGTGC 114122 32 100.0 35 ................................ TGCACGGTGCTGCGCGGACTCTCGGCCTTGGCCTC 114055 32 100.0 35 ................................ GCTGGGACGATGATTGCTTGTGCTACGTCATGGCA 113988 32 96.9 36 ..............C................. GTCGTGCAGTCCAAAGACCCCGGCGTGCTGCGCCGC 113920 32 93.8 35 ............G........T.......... GAGAGCTACACGCGCACCGCACAGTAGCTCATCGA 113853 31 90.6 0 .........-..G...............G... | ========== ====== ====== ====== ================================ ====================================== ================== 70 32 99.7 35 GTCGCACCCCACACGGGTGCGCGGATAGAAAC # Left flank : TACCCTCCCTTCCTCTGGAAGTGACCGCCATGCTGGTATTGGTTAGTTACGATGTGAGCACCAGCAGCGATGGCGGTCAAAAGCGGCTTCGTCGTGTCGCCAAAGCCTGCCGGGACTATGGGCAGCGCGTGCAGTTCTCGGTATTCGAGCTGAATGTCGAGCCAGCGCAATGGGTGAGCATCAGGCAACGGCTGATGGATACCATCGAGCCCGAGCTGGACAGCCTTCGCTTCTACTACCTGGGAAGCCATTGGCGGGGAAAAATCGAGCATATCGGCGCAAAGCCAACACTCGATCTGGAAGGTCCACTGGTTCTTTGAAAACTGCGAACCTCTAGCGAACGCGAAACTCCCGTTCGGATCGCGCTGCAGCAAGCAACTGATGTGGAAGGAATGTTGCCAACCCATCCCACATGAAGAGCCCGGAGAACCTTACTTTGAAAGCTTTTCGCGCAAACAGGTGTTTTCCGTCTTGGCAAACAAGACTTTAGGATAAAGCGG # Right flank : AAGTTCTTCCGCGACCTTTTGGCATCGACGTCGCACCCCGCACGGCTGCGTCATTTGTCGCATTGCGAATACACCCAAGCACGCGGACAGCATCACCCTCCTTACGGACCGACGCTGCCTGCCTGGTGCGTCCAGATTCGTGCTTATGCCAAATCTGTCATTGATCTGAGGACATGTTAGCGATACCTTCGCCTGCATTCGCGGAGCGAATGTTTTGCATCTTTTGAAGGAATGCATGACATGTTGGACGGAATCAACGCGCTGGGGACTGGCTTATGAGCCATCCCAGGGGTTACGCGCAGGGGGCGGCGCGCACATTGGCTTGGGTGACCGGCTCGGCAACGCTGCTGCTGGTGGCGTGTGCGGCCATGGCTGCCACCAAGGCACCGGCCACGGTTTATGGCCCGTGGAATGCGCAGGTGCTGCAGGGTGGCGTGGGGCTCAGGGCATCGTTGCCCAAGCACGCACCGCTGCTGGCGGCCGATGCCAGCTGGACGGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACACGGGTGCGCGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCACACGAGGTGCGTGGATTGAAAC with 88% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.60,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //