Array 1 9003-12150 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCME01000020.1 Acinetobacter parvus strain GTC 3704, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 9003 28 100.0 32 ............................ AAACACAGCAAACCCTCAAGCTACGGATATAA 9063 28 100.0 32 ............................ TTTAAGATCACCAGAAGTAATATATTTAGTTT 9123 28 100.0 32 ............................ AGCAGCTCCACGAGCTAAGACTTTAGATACTT 9183 28 100.0 32 ............................ TCTTGAAGTTGTTGCTGCTCAAGTTATTTCAA 9243 28 100.0 32 ............................ TGCTCAACAATCTTGTATTGATCTTGCTATTG 9303 28 100.0 32 ............................ ATCCGCCAACATTGGCAGCATTGGCTGCACGC 9363 28 100.0 32 ............................ TTAGATGTATCGGCAGCTTTAGCTGGTCATGA 9423 28 100.0 32 ............................ TGCTAAGACTGAACCAGTCTACATCATGGCTC 9483 28 100.0 32 ............................ TAACTGTTAATACTTACCGTGCAGCCAATGCA 9543 28 100.0 32 ............................ GTATGCCGTGAACTCAACCGCTTTCCGATTAA 9603 28 100.0 32 ............................ AAACGCGCCACTTGTCGAAGCACGCGACTCGA 9663 28 100.0 32 ............................ AAGCATCAACTACTTTGACAAATTGCGCTTAA 9723 28 100.0 32 ............................ ATAACTGCAACTTACATAAAGTTTCGCACCAT 9783 28 100.0 32 ............................ AGCAAAATCTATCTCTGGCTCATATTTATACT 9843 28 100.0 32 ............................ CAGATCATACCAATCATAGGCTTAGTTATGCA 9903 28 100.0 32 ............................ AAAGCTACCAAGTGACGCTGTTTATTCGCAAT 9963 28 100.0 32 ............................ ATTGAGAGAAATTGCGGTGAGCATGGTGTACT 10023 28 100.0 32 ............................ TAATAGCTTGTGACGACAAATGCCCGCTATAT 10083 28 100.0 32 ............................ CCAAAATAAAGTAAAAAATAATTGTAAATAAT 10143 28 100.0 32 ............................ AGTACGAAGATTACTGCAATCAAGACTACGAG 10203 28 100.0 32 ............................ ACCATGAAAAGCATAGAACAGTTTGTTGTTGG 10263 28 100.0 32 ............................ CAAGACTTACCACCACCACGGCCACCATGAAA 10323 28 100.0 32 ............................ AAGCACGTATTGCGAATAAACAGCGTCACTTG 10383 28 100.0 32 ............................ GTTCATCGGCAAATGGAAAATAATTATAAATA 10443 28 100.0 32 ............................ TTCGCAAAAAAGAGCGGGAAGCACGAAAACGC 10503 28 100.0 32 ............................ ACCTTGTTCGTCTTGATCTAAGCAACCATCAA 10563 28 100.0 32 ............................ TCACAAACAACAAAAAGCCCTGAACTATCTTG 10623 28 100.0 32 ............................ AGTACAAGCGGTTTTGAGCTTTTGATCTATCT 10683 28 100.0 32 ............................ ACATGATCCAAACTTGCCTGTTTACACATCAT 10743 28 100.0 32 ............................ CGACTTCAGGTGAAGTTGAGCATACAAATGAC 10803 28 100.0 32 ............................ GATATGTGTTTAGCTATATCCGCATTAAAACA 10863 28 100.0 32 ............................ ACATTGATGCTTGGTGGCAGGGTGAGCAGAAA 10923 28 100.0 32 ............................ ATCGTCATGCACACCTACTGCTTTTTGTAGTT 10983 28 100.0 32 ............................ TGGTGATGTGATTGATGCGGCTGTAGCTCAGT 11043 28 100.0 32 ............................ TGTGCGTGAGGATGGGCAATTGATTGGAAGTC 11103 28 100.0 32 ............................ TCTTGAAAAATAAATGTTCTGAATCTTTATCT 11163 28 100.0 32 ............................ TATAAAAAGGGTTGCAACTGCTGATCTGATTC 11223 28 100.0 32 ............................ GCTTAGCGTAATTCAAACCACCAAGACAAATA 11283 28 100.0 32 ............................ TACAGTGGTTTGTAGCGTGCTCACCTGATTCG 11343 28 100.0 32 ............................ GCAGCGTGTGAAGAAGGGAAGCCGTTGGTGGT 11403 28 100.0 32 ............................ TGTTTGACAATTTAATTCAAGCTGAACAGCTT 11463 28 100.0 32 ............................ ACCATAATTGATATTGTGGTGCTCTTGGAATA 11523 28 100.0 32 ............................ TTATTCCAAACAAGAAACTGATCTGCCGCACC 11583 28 100.0 32 ............................ TCAAATTGATTTTAGTGTTCTTAGTGCCAAAA 11643 28 100.0 32 ............................ ACTGAGCCTGACGTTCAATAAGGAGATAACCA 11703 28 100.0 32 ............................ AGTATCAAGTTGAAATAGGTCATCAGTTGTAT 11763 28 100.0 32 ............................ TTGCAAGTGGTTTTATAATTATTTTTCATTTG 11823 28 100.0 32 ............................ AGCAACGTACATCGCATCAAACCTAAGTCTAG 11883 28 100.0 32 ............................ TCGATTTGGCGTGACAACCAAGTCGGGGAAAA 11943 28 100.0 32 ............................ TTTCTTTGCTGCTAGGTTCTGCAAAGCCGTGC 12003 28 100.0 32 ............................ TATGTTCGCAAAGCAGAGCGCAGATTTAAGAA 12063 28 100.0 32 ............................ TTCTGAGATAATTATTTCAATGTCTATTAATT 12123 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 53 28 100.0 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : TGGAACAACTAAACTTAAACCATTGGCTAGAAAGACTGCAAGATTATGTGCATGTCTTATCTGCTCGTGAAGTTCCAGAAGATAAGATCAATGGCTATGCAACTTACTTTAAAGCCAATCCAAAATTAACGATTGAACAGCGTATTTTGCATCAAGCAAAACGCCGTGGAATTTCAATTGAAGAGGCAAAGGAACACTTTGAAGCATTGGAACTGACGGAGACTTTTGAACCTTATATTAATATGAAAAGCCAAACCAACGATATGAACTTCCGTTTGATTATTGGGAAAAAACGTGTTGATGAAGCATGTATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCTACAGTACCAGAGTTTTAACCCAATATTTTTTAGACTCTTTAACAGCTTAATAAAATCAATAAGTTACAACAAGCCATTTTTTGATTGGGTAAATTTATAAAATACATGATAAATGCTTGTTGTAACTTATATTTTTGCTTTATTATAACT # Right flank : TTGGGGCCATTTCGCGCGCTCAATGGAACCCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3596-2998 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCME01000073.1 Acinetobacter parvus strain GTC 3704, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 3595 37 100.0 33 ..................................... AATAGCAGATCGACGAACGCTGAATAGCCATTC 3525 37 100.0 32 ..................................... GGTTTAAGCTCTTCAACCTGTATATCTGTATG 3456 37 100.0 33 ..................................... AGGTATTGATACTTATCTTCTGCTTTAACATAG 3386 37 100.0 32 ..................................... ACATTAAGCTCAACAGCGATAGCACGTACATC 3317 37 100.0 34 ..................................... GTTGAACCTGCATCTTAGCAGTATCTTCCCATGC 3246 37 100.0 33 ..................................... TGACCTGAAGCATATTGATGCGTAGGGATAAAT 3176 37 100.0 33 ..................................... ATATAATCACCTGTTAACTTCCATACGTCTACA 3106 37 94.6 34 ...................TA................ TCCTCTTTTGGTTTTGCTGATTTACGGATCCAGA 3035 37 89.2 0 ...................TA..........G....G | C [3000] ========== ====== ====== ====== ===================================== ================================== ================== 9 37 98.2 33 GTCTGAACAGACTTCCCTGCTGATAAGGGATTAAGAC # Left flank : GATGACCGTTTATTTTATTACTCGCCATAAAGGTGCATTAGAATGGGCTAAAGAGGAGCATGTACATTACGATGTGCATGTTACCCATTTAGCAAATTTTGATGAACTGCGTGCTGAAGATACGGTAATCGGGACTTTACCTATTCATTTGGTTGCAGACTTGCATGTGCGAGGTATTCGTTATGTTCATTTATCCATGCATGTGCCTGCACATTTCAGAGGTTTAGAATTAAGCGCACAACAGTTACGCGATTGTCGTATCCGATTGGAGGAATTTTATGTTGTACGCCCTAACCCAGTTTGATCAGCACGCCCATGTATGGGACTACAATTCATGTATTGACATAGTATTCGCACAAAAATTATCACAACATATTGTTTTTTATATTTATAAGAAAAATTGTGAAACATTTTGTCATACAGCAACTTTACTGATACATACTTTGAAATATTTAGCCTCTATAAGTCTTTGCTTTACAAAAGAAAAAAAAGAGGGTAGA # Right flank : GATCAGCAAAGCACTGCTTTGCCCGAGTGCAAGACGAAAGCTTTGCTTGAGTTAGACGTGAACCCTCGATAGTATCTATTGCAAAATACTGGATAAAACGACCACCTATTCCTGTTCGTAACATACCAGTCATTCCTATTTCTTGAACCACTTGGATATGAGACAAAATCTCATATCCTTTTAACTGGTTACATAGCTAATTTTGCGGATACTAAACGATTCATACTTACACCACGTTCTGCTGCTTCTAATGCTAGTTTTTGATGAACCATTGATGGAACACGTACAGCAAAACGACCACTATATTTCTTCTCTGAAAGTGGCACTGGTACTTTTTCATTATTACTGATCATATCGGCTACAACCTCAGCAACAACATTAACAATACCTGAAAATGCTTTAGATTGATCTGCATCAAGCCAAGATAATGATGGAAATTCAGCACATTGTCCAACGTATTCATTATCTTCTGCTGACCACATAACACGGTAAGTATATTG # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAACAGACTTCCCTGCTGATAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.50,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 34-4625 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCME01000021.1 Acinetobacter parvus strain GTC 3704, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 34 28 100.0 32 ............................ AGAAGTGGGTTTTACTTGAACATCCAGAATCT 94 28 100.0 32 ............................ AATAAGAATGACAAGCACGTTGAACAATACAA 154 28 100.0 32 ............................ ATGATATTTGGTTCATAACACAGTCGCCACGC 214 28 100.0 32 ............................ TATTAACATTCGTTTTAATGCAGAACCCAATA 274 28 100.0 32 ............................ AACAGGGGACAAAACTGGACGTATCACAAGCC 334 28 100.0 32 ............................ ATGCCCTCGGTGCTTGAAAATGCCTTCAATCC 394 28 100.0 32 ............................ TCACTGTGGTGCTGTAGTAGTTCCTGTCTAAT 454 28 100.0 32 ............................ TGAATCTATACGTTTCTGTATCTCAATATTTT 514 28 100.0 32 ............................ TGACATATTGACGGTGCCCAGTCACAGAAAAT 574 28 100.0 32 ............................ ATAAAAATAATAGAATTATCAGGAACATCACG 634 28 100.0 32 ............................ GCCAGCAGCGTTTGAAATTACTTGTTGAGCAA 694 28 100.0 32 ............................ ATTGCGATTGTAAGAGCGAGAGCGTTGCTGTA 754 28 100.0 32 ............................ ATTCTCGCCAGAGCAGCATGACTGCCCTGATA 814 28 100.0 32 ............................ ATTTCCATCCATGAAGTATTCAGCATCAAACT 874 28 100.0 32 ............................ TGCACTATATGCGGCAGGAACACCAAACAAGC 934 28 100.0 32 ............................ AATTAGTTTATGCAGAGAGGAGCAGCGGAATA 994 28 100.0 32 ............................ AACAGAAGATAAGACATTTCAACATGCGTTAT 1054 28 100.0 32 ............................ CTTTGTTTTAAGTGTTTTGAATGATCGTATGA 1114 28 100.0 32 ............................ TGATAACGATACAAAGCCGTCACGCACTAGCC 1174 28 100.0 32 ............................ GTAACAGCGTTTAACATCTATATTCTCCTTAG 1234 28 100.0 32 ............................ GACAATTGGTACTCCGCATATTGTTTTAAAAG 1294 28 100.0 33 ............................ GACATTCTTGGAAAATCCGTAGGATGTACTTGT 1355 28 100.0 32 ............................ TCAAAAATTCCCCTGAACCCCTGCTGATAAAT 1415 28 100.0 32 ............................ TGTGCCAATGCCCAACTATTTACAAAACTTAG 1475 28 100.0 32 ............................ TGACAACTCAATTGTGATTTATGACGAAGCAC 1535 28 100.0 32 ............................ GTTAAAGTCATAAATACAAGTTGTTCCTTGAA 1595 28 100.0 33 ............................ CCCACGCTGTAACCAGTACAAGACCAATTGCAC 1656 28 100.0 32 ............................ AGTGTTAGCATTTGCGGCTGCATCTTCATCGG 1716 28 100.0 32 ............................ AGTCAGTTAATGTAATTGGCAATTTTATAACT 1776 28 100.0 32 ............................ CCCGAAACAATCAAGACCGCAGACAAAGAAGC 1836 28 100.0 32 ............................ TCGTCCCCATCTTCGCCCTCTATTGTTTCGGA 1896 28 100.0 32 ............................ ATCTGCACATGCTGCTTCATCAATTGATGCTA 1956 28 100.0 32 ............................ GACAAGTTGACCATTAGATAAAGTCATACAAC 2016 28 100.0 32 ............................ TCAACTAGAAAAAGTGTTAGATGCAGCTTGGG 2076 28 100.0 32 ............................ TTACAGAAAAACAAGCATTCCACCAGAGAGTA 2136 28 100.0 32 ............................ TTGGTGTGATGTCATCTCAACCTTTATTAAGC 2196 28 100.0 32 ............................ TGACGGCTCAATTATTATTTATGATGAAGTAC 2256 28 100.0 32 ............................ AACATGTACAGGCGATGATTGCGGTCAATACA 2316 28 100.0 32 ............................ CACAAGATTCAGTTTCTTTTTCTGTAATGGGT 2376 28 100.0 32 ............................ TAAAAGAGCTTTTAAACCACGCGCCCAAACTA 2436 28 100.0 32 ............................ TTCACGACGTGCTAATAAAAGCTTTGGAAAAA 2496 28 100.0 32 ............................ ATCATGGAAAATCAAAAAGAAAACCGTGATCT 2556 28 100.0 32 ............................ CTGAGCTGTAATCATTCTCCAGTGCTGTTAAA 2616 28 100.0 32 ............................ TGACAGATGGAACAAAATTGGTACGATTATTA 2676 28 100.0 32 ............................ ACATAGAAATACGGCTGATTAGTGTCTTTTTT 2736 28 100.0 32 ............................ AGCGTGACTACTGCATTTGACCCCAATATCGA 2796 28 100.0 32 ............................ TACAGCGGAACAACAACAAAAAACCTTACCTT 2856 28 100.0 32 ............................ TGAAAGGCGCGGATAATCGTTTACTTGAATAG 2916 28 100.0 32 ............................ ACGAAGAACTTTAGCAACTTGGCTTGCGTTCG 2976 28 100.0 32 ............................ TCAAAATCTGCTAATTCTTTGGGAAATGTAGC 3036 28 100.0 32 ............................ TAACAAAGGGAATAAGTCGATATGTTATAGAG 3096 28 100.0 32 ............................ CAACCGATCAGCCGTTCCTTCAAAATTTGTTA 3156 28 100.0 32 ............................ AAAAGTACATCAAGCTCGACGTGAATGGAAAG 3216 28 100.0 32 ............................ GAAGTCAATTGCATCATATTTCTGCGGATTGT 3276 28 100.0 32 ............................ GCAAAAACCTATGCGAATGCCAAGGCGAAAGC 3336 28 100.0 32 ............................ AAGGCGAAAGCTGAAGCGGATACAGCACTTGC 3396 28 100.0 32 ............................ AGCATTATGAGATGGCACAGTTAATGGCCATG 3456 28 100.0 32 ............................ TGCATAAATACCCTGCACTTCTGCTGAATTAT 3516 28 100.0 32 ............................ GCACGCGTTTGCTGCTCTGTGATAATCAGTGC 3576 28 100.0 32 ............................ TGAAAATGTTTGGAAATATTTATCTGTAAAGC 3636 28 100.0 33 ............................ TTGCCAAGTGCCTCTGTTGCTGTATCTTGAGCT 3697 28 100.0 33 ............................ CAGTAGGGGCTTATCTCAAAACTGCGTTTATAG 3758 28 100.0 32 ............................ GAAACATGAAAATCTAAATATAGCTGATTTTG 3818 28 100.0 32 ............................ ATCAAGACCTGTGACTGAGGTTTTATTTGAGT 3878 28 100.0 32 ............................ AACCAGTGTTTCTAAAGCCTCGTCAAAATCAG 3938 28 100.0 32 ............................ TGTAGTCGGTGCTTTGCTGACTGCAATGTCTT 3998 28 100.0 32 ............................ TTGGGGCGAATAGATGCACCATCATTACCCCA 4058 28 100.0 32 ............................ ACCTACGGAGTTTTCTTCGGCAACGGCTTAAC 4118 28 89.3 32 .......A..G......T.......... ATAGAGAATGCAATTGGAAATCCTGACAATGC 4178 28 89.3 32 .......A..G......T.......... AGAGAACAAAGCCAATGATTGACATAATCAAT 4238 28 85.7 32 ......AA..G......T.......... GTACGTGAGAAGCACCAGAGCCGCCAATGTTT 4298 28 89.3 32 .......A..G......T.......... AGCAAAATAGTTGTATCCAATCACCTGTTTAC 4358 28 89.3 32 .......A..G......T.......... GGAAGATTGCCACGTTCCGTAGCGATCATTTT 4418 28 89.3 32 .......A..G......T.......... TGCCATTCCATTTTTACGCATTGCATTTTTCA 4478 28 89.3 32 .......A..G......T.......... CGTAAAATTAGATAATTCTTCAATTGTCATCT 4538 28 89.3 32 .......A..G......T.......... TAATTAAGTGTGAGGGCACAGGCACGGCAGGA 4598 28 78.6 0 .......A..G...G..T......AT.. | ========== ====== ====== ====== ============================ ================================= ================== 77 28 98.6 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : ATATAATTGACAATAGAAACAAAGAAAATAAAGG # Right flank : ATTGGGTTTCAATTATTGCCAAAATAAAATTAGGTTAAGGATATCCATCTAGGATAATCCATAATTTTATCTAAATATTAAAAAAAGATCCTGTCTACTCCTCATTTGAGGAATAGACACAATAGTGCTTTTCTCTAACACTAATCATATTGTGAAGTAAGGAGAATATCATGAAATATAAAATGGCAGCTGCTGCGGTCTTGGGTACTTTATTATTGGGAGGTTGTGGTGGTTCAGATGATGTCATTGATAATATAAAGCAAGAAATTGATGATAAAAATAAACCAACTGAAACGACTACCGCCAATTGGGGCCTTGAAAAGACGGTCAATACAATTACACACTCTGCTTTAAGTACCTTTGTTAATTTTGGTTTTGTTGATGCATTGGTCTATGGCGCTGATGAGGCTGTAGAGGGTACGCCTTGTTCTCAAGGCAACTATGTAAAAACAAGCGATAAAATTACCTTTAATAATTGTAGGGGTTTATTTGATGATGAT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //