Array 1 9731-10200 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOMX01000061.1 Nannocystis exedens strain ATCC 25963, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 9731 37 100.0 34 ..................................... CTAGGCGGGGCTCGGCTGTCTCCCGCGACCCTCG 9802 37 97.3 36 ........................A............ GGTGCGTCGCCGCCGTAGTCGCGGGTCGGCGCACCT 9875 37 100.0 35 ..................................... GAGACGTACATGCACGACGCCGACCAATTCAGCTT 9947 37 100.0 34 ..................................... ACGTGCAGGCCTGCGAGGTGTAGCGGGGCGAACT 10018 37 97.3 34 ..............T...................... AGCGACGGCCGACGACGGCGGGGCGGCAGCGATC 10089 37 97.3 38 ................A.................... ACGCGCCGCCCGAGGATGAGGTCGCGGACGCGGGTGAA 10164 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 7 37 98.8 35 CCCTCCGCCTCGATCACCGAGGCGGCCCCGTTGAAGC # Left flank : GCCAGACCTCCGGCTAATCCGGCGGCTTGGGGGCTGACAGCGACGATCCCTAAGCACTCCCATCGGAACTCCGGCACGCAGATATTGCGCCAACTCGCTCCATGGTACCTTGGATGCACGCGCCCCGGAGAGTCGGAAATGCCGGGCCTCGCGTGCGAACCTTCGAATTCATCGCCGTTCCCCTATCCGCGGAGGCTTCCTGACAACCCTCATGACGAACATGACGCCGAGATACGACGCCTCATCCGCCCCGCGTGCCTTCGCCCCTGAGGAGCCAGTTGTTCCGGCTGCTTCCCTCGGGGGTCCTCCGCCTCGATCACCGAGGCGGCCCCGTTGAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCGCCTCGATCACCGAGGCGGCCCCGTTGAAGCACGTCGCGGGTAACGCGCGCCGTATCGCTGTAGTC # Right flank : CATGACGAAGCAGCCGTCGCCGGCGGGTGGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTCCGCCTCGATCACCGAGGCGGCCCCGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.20,-12.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [33.3-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 242218-242385 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOMX01000005.1 Nannocystis exedens strain ATCC 25963, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 242218 32 100.0 37 ................................ TGAGGCGGAGAGCAGACTCGGTGCCCGGTCGCGCCGA 242287 32 96.9 35 ..............T................. CGCGGTCGAAGCGACGCGCGCGAAGGGCGAGTCCG 242354 32 96.9 0 ...........................A.... | ========== ====== ====== ====== ================================ ===================================== ================== 3 32 97.9 36 TGGCGAGCTGTCCCGAGGAGCAGGTCGGTGCT # Left flank : CGAGGACGCGCAGCGGCTCGGCGACACGCCGTACGCGCGGGCGAAGATCCGCGGCGAGGACGAGGTCCGCGCGGCGGCGGCCCGGCTCGGGCTCGAGGCGATCGTCGTCCGGCCCGGGGTGGTCTACGGGCCGGGTCAGCGCCCGGGCATGCTGATCCCGTCGCTGCTGGCGGCCCTGCGCGCCGGCCAGCGGTTCGCCTGCACGCCCGGCGAGCAGACCCGCGACTTCGTCCACGTGGGCGACGTGGGGCGCCTGCTGGCCCGCTGCACGGAGGACGGGGCGCCGGCGGGGGTCTACAACGCGGGCACGGGGGTCGAGTCGGCGGTGGCGATGGTGGTGCGCGCGCTGGCGTGGCGGCTCGGCCGCACGGACCTGGTCGACCTCGGCGCGCTGCCGTACCGCGGCAGCGAGGTGATGCGCTACGTGCTCGACCCGACCCGCGCGAAGGAGCGGCTCGGCTTCGTCGCCCAGGTCGCGCTCGCCGACGGGCTCGAGTCGG # Right flank : TTGAGGTCGAGGCGCGGTGGCTGCGGGCGCGGCTGCAGGAGTTCTCCGACGCCGAGCTGTCGCCCTTATTAAACCTCGGCAGCAGCGACCTGCACTTTCGCACGGTCGTGCAGCCGTGGATCGACCGCGAGGTGTTCGCGCCGCTGCGGGCGCGCGGGGCGGCGATCGTCCACAGCGACCTGAAGACGCTGCCGGGGGTCGACATCGCCGCGGACGCGCTGAGCGAGGAGGGGCTCGCGCGGCTGCAGGCGGTCGGGGCGCGGGCGATCCTGTGCTGCAACATGCTCGAGCACGTGACCGACCGCGCGGCGCTGGCGGGGCGCCTGGCGGCCCTGGTGCCCGCCGGCGGGCTGCTGATCGTCACGGTGCCGTTCAGCTACCCGTACCACCCCGACCCGATCGACACGTACTATCGACCTGCCCCCCAGGACATGTCCCGCGAGCTGTTTCCGGCGCTGCGGCTGGTCCGCGCCGAGATCGTCGACGGGCCGACCTACGCG # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGGCGAGCTGTCCCGAGGAGCAGGTCGGTGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //