Array 1 8207-11667 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWKS01000009.1 Sphingomonas sp. TF3 9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 8207 32 100.0 34 ................................ ATCATCCGTTGTACACCAGAGTGAGTTGCGCCTT 8273 32 100.0 34 ................................ AGCCTGGTCGATGGTGCATTGCGCGCGATCGGTA 8339 32 100.0 34 ................................ GAAGTCATCTCGCTCAAGCTCGACGATGTCACCA 8405 32 100.0 34 ................................ GGAACATAGATGCAGAGTTCTGCATGCTCGGCTG 8471 32 100.0 35 ................................ CACCATCACGTCCGCGACGGGCAAGGCCGTCACAG 8538 32 100.0 34 ................................ TATCATCGTCATGGCTCTGGACAGTCGCCGCTCC 8604 32 100.0 34 ................................ CTTTCAGCATTACGACGCGTTCGCTGAATTGGAG 8670 32 100.0 34 ................................ AGTTCCCACTCGGTCAGCAGCATCGTGCAGAACG 8736 32 100.0 34 ................................ GGGATCGAGAACGGGTATGATACCCACTCTCAAA 8802 32 100.0 34 ................................ ATCGTCAAGGATGTGCGTCCGGACGGCCATGGGC 8868 32 100.0 33 ................................ ACCGGGGAGCGCTGCTTGACGGATACATCTCAG 8933 32 100.0 35 ................................ CCGCTCGACGAAAGCCACAGTTCGATATCTGGGCT 9000 32 100.0 34 ................................ AGGTGTGCGTCACGCGCTTTAACGTCGGCCAAGA 9066 32 100.0 34 ................................ AGCTTGCCCACGCGCACCGCCACAATGCGACAAC 9132 32 100.0 33 ................................ ACCGTCGAGCTGGCGCACGCGTTCCGCCACGCG 9197 32 100.0 33 ................................ CTTTCGGGTACGGGATAGTGTGTGGGGTAAGTC 9262 32 100.0 33 ................................ ACGCACGAGATGCTGCGCGGCGTCGCGGCGGTG 9327 32 100.0 34 ................................ TACGTGTTCTGAATGTTCTGCGGCATCGTCGTTG 9393 32 100.0 36 ................................ AGTTTCTGAATAGCACTGATCTTGTCGTAACGCATA 9461 32 100.0 33 ................................ TGACCCCACGGCGCGGCCGGCGCGCCGCGCCGT 9526 32 100.0 34 ................................ CTCTGCAATATTTGACGGTACCGAATGTGTTGGC 9592 32 100.0 34 ................................ GTGTTCGATGGAACCGGCCGGTGCGGCGGGTGTC 9658 32 100.0 34 ................................ GATTTCATCGTTTGTTCGCTGACCGACACCGTAT 9724 32 100.0 34 ................................ ACCGTGGCGATAGACGACCAGCAGCAGGATCATG 9790 32 100.0 35 ................................ ATGTGCCGTTAGCCGCCGGTGTCGTTGTGCTTACC 9857 32 100.0 33 ................................ TTGGCCACAATATCATACGAGTATGCGTGGAAT 9922 32 100.0 33 ................................ TTTCCGCCTGGACTTGACACGCTTCGCCAGCGC 9987 32 100.0 36 ................................ TCGACCAATCGCTGCACGTTGGCGAACTGATCGAAA 10055 32 100.0 33 ................................ TCGATCGCCGCCGTGTCCACGCCGCGATCGGCC 10120 32 100.0 33 ................................ ACCGCCGGGGCCGGGGCGGCGAGCGCTGCGGTG 10185 32 100.0 34 ................................ CATGCTTCGGCGCTCGTGTCCGGGCGGCGATCGG 10251 32 100.0 35 ................................ AGCCATCGCAGCCGCATCGGCCACGCGCGCAGCGT 10318 32 100.0 33 ................................ CCGTCGCCAAGATCGTGCGCGTCCGGCGTCCAT 10383 32 100.0 34 ................................ ACCGACATCAAACGTCGCGGAGGCGCGAAGCATG 10449 32 100.0 33 ................................ GAAGCCAAGGCGATCGAACTGGACAAGCCCCAG 10514 32 100.0 34 ................................ AATTGCGTCGCTTCGTCCGCGCCGATCCGGCCCA 10580 32 100.0 34 ................................ TCTGAGCTATCACGCTCCCACACCGTCATCGATC 10646 32 100.0 33 ................................ ATCGCGGCCAATCCCGATCGGTGTCCGTCGCCG 10711 32 100.0 34 ................................ ACCAAATGCCCCTAACGCGCTAGTCGGCGATCGA 10777 32 100.0 33 ................................ GCGATCGTCAAGCGCGCCCTCAAGAAAAGCCGT 10842 32 100.0 34 ................................ GGCGAGGTGACGATCGTCGAACGCGCCTGGGCCA 10908 32 96.9 34 ......T......................... ATCATCCGCGCGAGGCCAAGCCCCCCGTGTTCGA 10974 32 100.0 34 ................................ GGCACAACCGGCCCGGTCGCGTAGACGATCTCGT 11040 32 100.0 33 ................................ ACTGAGTTTAACATGAGGAGACGAATGATGGCA 11105 32 100.0 34 ................................ ATTGGGCACGCGCGCGACAAGATGCATTTTCACC 11171 32 100.0 34 ................................ AATTCATCAAGTCGGCCCGGCCAGGCAAACCCGT 11237 32 100.0 35 ................................ ATGGCACGCGCGAGGCCAAGCCCACCGTGTTCGAG 11304 32 100.0 34 ................................ TTTGGGCGAGCGGGTGAGCAGGTTCGCGCTCCCC 11370 32 100.0 35 ................................ ATGCTGATGAAGTAGATCGTAGCGTTAACCGAGGC 11437 32 100.0 35 ................................ CAGCTTGAGCGAGAGGAGTTCGAAATTGTCGGCAC 11504 32 100.0 34 ................................ CACTATGAGCCGACAGGCGACATTCAGTCGGGTC 11570 32 100.0 34 ................................ AGCGCGGCCGTCGCGGCACCGGCCGCCGCCGTTG 11636 32 96.9 0 ...........................A.... | ========== ====== ====== ====== ================================ ==================================== ================== 53 32 99.9 34 GTCGCTCCCCGCGCGGGGGCGTGGATCGAAAC # Left flank : GAAGTGACGCGATGCTGATGCTGGTAACCTATGACGTGAGCACCGAGGACGCAGCGGGCCGACGTCGGCTTCGGCCGGTGTCCAAGGCCTGTCTGGACCTTGGCCAGCGCGTGCAGAATTCGGTGTTCGAATGCGAGGTCGATCCGGCGCAATGGGCATTGCTGCGCGCCGCGCTTTTAAGGGAAATTGATGCGGAAAAGGATTCGCTTCGCTTTTATCGGCTTGGTGCCGATGGCAAGCGGCGAGTCGAGCATGTCGGTGCCAAGCCGGTTCTTGATCTGGACGGCCCGCTGCTGTTCTGAACGTTCTGTCGCGGCAGGGTGCGCGAACCCCAATGTGTTGACATCGCACGGGAAGGTTCGCGCGGAGCAAAAACACATGCTTTTCATAGCGATGATTGGGAATGGGGGTGAAAGCACCTTGGTTTATGTGAAGTGTGCGCCACTTTCGCGCTGAAGCCCGGATTTACCGCTCTTTCTCATTGTATTAAGCACCGCGCT # Right flank : CTCGGTCCTGCTGTTTAAGAGTCATATGGCGAAAGACTGGTTTTACCCCAAGGGCACCTGAAAGCAGCTATTCCGCCGCCAACGCAGTTGCAACCGCCGCTATGAGATCTTCACCTTCCCGAACTTGCCGTCGAGAACCTTGGCGCCATCGCGAAGGAAATCAAGATGATCTGACCAGTGCTGCATCATGCGCACGCGCTCTTCCCAATATTCGCCGCGGGTATAGGCGCGGCGCACGGCATTGTTGTCGCAGTGGGCAAGTTGGCGCTCGATCGCGTCGGCGTGCCATAGCCCCATCTCGTTCAGCAGCGTCGCCGCCATGGCGCGAAAGCCATGGCCGGTCATCTGGTCTTGCGCGTACCCCATTCGACGAAGAGCTGCGTTGATGGTGTTCTCCGACATCGGTCGCTCAACCGAACGTAGCGATGGGAAAAGATACGAGCTGTGCTCGGCGTCGTGCTCAATCGATTCGATGATTCGAAGCGCCTGACGGGAGAGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //