Array 1 13502-10825 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGUY010000258.1 Limosilactobacillus reuteri strain AG_2_6_1 scaffold258, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 13501 36 100.0 31 .................................... AGGATCAGATACCCAGTTAGAAACAGCTTTA 13434 36 100.0 30 .................................... TGTACGAAACGAATAAAAGAAAGCCTAGCC 13368 36 100.0 30 .................................... TTAGTGGACGGCGCTTGGCCTATGGTTATT 13302 36 100.0 30 .................................... TATTCTCGTACTCAGGGGGGTCCAAATATA 13236 36 100.0 31 .................................... ATGGAAAGAATGCCCAACACAGTAAGCTTCA 13169 36 100.0 30 .................................... CAACCGCAAAAAGCCTGAAAAACAACGGCT 13103 36 100.0 30 .................................... GCTAAATCGTCCGCGACTATTAAAAAGCAT 13037 36 100.0 30 .................................... CTACTAAGAGTTCTAAGACTATGCGTCACT 12971 36 100.0 30 .................................... CACTTTGTAAGTCAACCTTCGTCATATTGT 12905 36 100.0 30 .................................... AAGACTTTGGAAAGATTGGACGAAGCATAG 12839 36 100.0 30 .................................... TAAAGCTGAGGGAAATACGGCAGAAGCTCA 12773 36 100.0 30 .................................... GAAAGCGAGGATGATTAAACATGGCTCAAT 12707 36 100.0 30 .................................... GAAGTAACAATGTTATTATAATAATGTAAG 12641 36 100.0 30 .................................... TAAACACGGGTTGCCCATCATTGCTGACGG 12575 36 100.0 30 .................................... AGCCATTGCCACCCAGCTCCTTTACGTTTT 12509 36 100.0 30 .................................... CTGTCATAAGAAGACTTGTCTGGGTCAAAG 12443 36 100.0 30 .................................... CCACAAAAGTAATTAATGGTATTCCCAAAG 12377 36 100.0 31 .................................... TTTAACCTAACAGTTACCACACCAAGTGACG 12310 36 100.0 30 .................................... TGATAATATTATCATAATCAAATTCTTGCA 12244 36 100.0 30 .................................... TAAAAAGCGTTAAATTGCGGGCAATTGCAT 12178 36 100.0 30 .................................... TACGCTCATGGCTAACCCCTGCTTATATTC 12112 36 100.0 30 .................................... ACTAAAGTGTTTCCAAGCTTGGCTACAGGA 12046 36 100.0 30 .................................... CCATATAAAGTTGATGAGGATAGGAACCTG 11980 36 100.0 30 .................................... AATCAAATATGGCAAATGAAGTAACATACA 11914 36 100.0 30 .................................... ATGGTGTGCTGTTTCAATTTGGTAATAAGA 11848 36 100.0 30 .................................... AAACACACCAATGAATATCTGTTAGAGCGG 11782 36 100.0 30 .................................... TTATTTTGACTTTTTACTAGCTTGCAGTCG 11716 36 100.0 30 .................................... TAAAGAGTGGTAACGCTATGCAGTCTGCTA 11650 36 100.0 28 .................................... AACGCGCGCAAAACCGTAGTAACGCAGA 11586 36 100.0 30 .................................... TGCTACTATGAAGAAAATTCGGAACTTGGC 11520 36 100.0 30 .................................... TGCTGTTAATCCCGTGGATGGGGATGCTAG 11454 36 100.0 30 .................................... AAGATATTGATATTTATAACGAATTATTAA 11388 36 100.0 30 .................................... TCTACCGGCGGATGACGATTGTTGAGCCTT 11322 36 100.0 30 .................................... TTTTCAAGGTGGGAAATCATGGGTGGAAAG 11256 36 100.0 30 .................................... GATCAAATTAACAATGCAGTACGTTCTATT 11190 36 100.0 30 .................................... TCTCGATGACAGTGGTTAATTCCCTCGTTA 11124 36 100.0 30 .................................... CTAACTAACTCGCTCAAAGCAACAGTTGAG 11058 36 100.0 30 .................................... TTGGTAATTCAATGGCATACGGATGTTACT 10992 36 100.0 30 .................................... TCAAAAGCTTCGTCGGTAGCCTTCTCATCG 10926 36 100.0 30 .................................... AAAGCAATCAATGAAAACAGAATACAATAT 10860 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== =============================== ================== 41 36 99.8 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : AAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAAATAATGGCAACAATTAAAGAAATTGCGAAAAAGTCAGGGTACTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAACAAGATCATGACGGTGGCTACCGAGCTTGGCTATTGGAACAGCCACAAGAAAAACTCTCAGCAGCAACCAATTCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTACGCAATGCAATTATTAAAGAAGTCGATGAGGTGGGAGCACAGGTTGAGATCTTTAGTAATATCAAAGATTTAATTGCGACGGCTGATTCGTTCCAAGGATTTATTGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //