Array 1 229361-226686 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKCT01000001.1 Chromobacterium sphagni strain IIBBL 14B-1 Cmus_14B-1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 229360 32 100.0 34 ................................ TTCTTGGGTGGCTCGATCGTAATTGCAGGCGGGA 229294 32 100.0 35 ................................ ACCATGGAACTCACCCACAACAACCTTTGCAAGCT 229227 32 100.0 35 ................................ AGCGGCGTTCGGCAACCAGCAGGAAATGCCCTGTC 229160 32 100.0 34 ................................ TATGCCACCTCTCTTTGATCAATATTCGACTTCC 229094 32 100.0 34 ................................ CACGCATTGCTGCTGTGTCATGCGCATGCCGGCA 229028 32 100.0 35 ................................ TGTATCGACTGGAGAGTTCGACCAGGAAGCATGCC 228961 32 100.0 35 ................................ ACCGCGCCATACGAGTACCGGGAATACCCGAAGTG 228894 32 100.0 33 ................................ TCTACACTCGCGTGGGCCGCCCCTGGGGAACAG 228829 32 100.0 33 ................................ CTCGGCTGCAGTGCGCGTTGCCCATGCAGGGGA 228764 32 100.0 33 ................................ GGTGACAAAGTGCTGAATGTCAAAACCACTTGG 228699 32 100.0 33 ................................ GGCATAACATCGACAATTTGGGATGCAGCCAGC 228634 32 100.0 33 ................................ CATGTGTAAAATCCTCAGTCGACGAAATGGTGA 228569 32 100.0 33 ................................ TGCGGCCGGCGGTTATGTGCGTGTTTCGGCCGG 228504 32 100.0 35 ................................ CGGCACCGTTACCGCGGCCAAAATTTGATGGACAG 228437 32 100.0 35 ................................ ACGTCCGGGGTATCCGCATACGTGTACGGTAATTC 228370 32 100.0 35 ................................ AAATCGACACTCGGCAGCATCACGCCGTTTTGACC 228303 32 100.0 35 ................................ TTGACTCCCTGTCGTCCGCTTTTTCGAAGCTGGAC 228236 32 100.0 34 ................................ TTGCTCTTTCTGGGCCGCGCTCTTGACCTCGTCC 228170 32 100.0 33 ................................ ACCGCCCTGGCGTTTTTTGACAAACGATACCAG 228105 32 100.0 34 ................................ GCTGCCTCAAGCGTTTCCTGTAACGCGACGGGAA 228039 32 100.0 34 ................................ AGCTTGGCCATGAGTTCCGCAGCGCCTACAACTT 227973 32 100.0 35 ................................ TGCGGGTTTTCGTCCTTGATCACCAGGGTCGGGTC 227906 32 100.0 33 ................................ ATGGGCACTGCACCTTTCGGATAGCCCCCAGGC 227841 32 100.0 34 ................................ CCCACCCGACCAGCACGCTGGCACCCGAATTGAC 227775 32 100.0 33 ................................ CACTGCGGCCACGACGGGCGCTGCGGCCGGCAC 227710 32 100.0 33 ................................ AGTTCGCTTGGTTATGGTATCAACGCGCAGACG 227645 32 100.0 34 ................................ ATTGAGGCTGACACCGGATTCCGTTTGCGAGCAT 227579 32 100.0 33 ................................ GCCGAAGCTGGACCGTCCGCAGCCCCATTTAAT 227514 32 100.0 35 ................................ CCATTGCGCGTGGAGTGCCACCAGACTGCTGCCGA 227447 32 100.0 34 ................................ TCTACGGCGTCCGCCAGTTGGGTCAGGGTTTGCA 227381 32 100.0 34 ................................ CGACGCGCGATTCGGTTTCGTCTTCGAAGATATG 227315 32 100.0 35 ................................ GATTTATACACGGTGGTAAACGGGACAGTCATTGC 227248 32 100.0 34 ................................ GCTGTGCGGCACCGTTTACGGTATCGACTCGGAC 227182 32 100.0 35 ................................ ACAATTGCGGCGCGTGGGCATTTCAGCACGATCCA 227115 32 100.0 34 ................................ TCTGTGCAAAATCCGCGCAGGATCAGGCTCAACA 227049 32 100.0 36 ................................ TATTTATGCGCTGGCCGATTTCAACAATCCGGGCGT 226981 32 100.0 33 ................................ CTCTGCATCAATGCCGCCGCGCAGAACTGGATC 226916 32 100.0 34 ................................ GCATGAAAGAGCTGACCATCGGCGATGCCATGTA 226850 32 96.9 35 ....T........................... CCTGCGTTGTGAATAGGGTAATGACCGCAAGCGAC 226783 32 100.0 34 ................................ GTGGTGGTGTTGGCAGCTACAGAGTCCGGAGCGA 226717 32 71.9 0 ....TC......TT....T....AG.....GT | ========== ====== ====== ====== ================================ ==================================== ================== 41 32 99.2 34 GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Left flank : ATAGGAGGGATGGCAAGATGATGGTGCTGGTCAGCTACGACGTCCGCACCCAGGACAAGGATGGCGCCGCCCGTTTGCGTAAGGTGGCACGTGTCTGCAGAAATTACGGCCAGCGCGCGCAATATTCGGTGTTTGAAATAGAGGTAGAGCCTGCGCAATGGGTGCTGCTGCGGGACAAGTTGTGCTCGCTGATAGATGCGCGGCAGGACAGCCTGCGTTTCTATTATCTGGGCAGCAATTGGAAACAGAAAGTTGAGCACATCGGTGCTAAACCGGTGCTAGATCTACAGGGGCCTTTGGTGCTGTAAGCCGGAGACTCGCTGTGCGAACCCCAAGTGACTGCCCATTCCCTGGGAGGTTCGCGCCAGTTGCAGACTGTGGATTGGCCAGCCTATCCGGCCCGCCGCGATGGCGCGCAAACGGCGAGACCGGCTATTTTGTAGCTGGTTCGCGTTTTCTGGATGAAAATACATTTGTTTTCATATGTTTGTAGTGACCCA # Right flank : AAAGGACTTCCGAGTGCACCACTAGCCGCAAGTGGGGTTACAGCCCATATGGGGGCGAGGATTGACGGCAGGTAACTCTTGCCAACCAGGCTGCGGCCGTACCGTTGCCAAAGCCACGCCATAGCGCAGGCGCGCCCGGCGCAATACGGTGGCTTGATTGGCCGGCGGCAGGTTGCTCCACCAAACCAGCCGGCCATCCTTCAAGGTCAGCCGCCACAGCCAACAATGCCCCATTGTGACGCCAGGCAGGGGCTGGAAGGCATCGCAGCGGGCGGTTTGCTCATGTGTGGGAATCGTTGCCAGCTGTCGGCATTGTCCTTCTCGCAGGGCCGCGCAGCCCCGGCACAGCAGCGGCAAGCGCTCGTCGGGGTGCAGGTCCGCGCCGGCCAGCTCGGGGCCGTCGTCCCGACACCAGGGCAGGGCCAGTGGATCGGGCGCGGCGTTGTCCGCCTGGCGGCGGGTTGCCATGTCGGTTGGGCTCGCCGCTGTGGGCAGTTCGT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.90,-10.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 35833-37569 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKCT01000083.1 Chromobacterium sphagni strain IIBBL 14B-1 Cmus_14B-1.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 35833 29 100.0 32 ............................. CCGCCTTGACGGTCACGATATTGGCGGCGGCT 35894 29 96.6 32 ............................A ACACCCATGTATCGCGATAGAAGTTCATGCCC 35955 29 100.0 32 ............................. CGGCATGATCACGCCCACGAGTGGTCCAGGCT 36016 29 100.0 32 ............................. ATCGACGGCATCAGCATTTCGGCGAGTGGTGC 36077 29 100.0 32 ............................. CTCTGCGGTTGGACTTCGCGCTTGATTGTGTA 36138 29 100.0 32 ............................. CAGTCCACCGACTCGGCGGGTTCCGAGACTCC 36199 29 100.0 32 ............................. TTAGCGATGCGTGAAAGGACTGACATGCCCCG 36260 29 96.6 32 ............................T CACCAGCGACGACAAGGCAACAGCGCGAAGAA 36321 29 100.0 32 ............................. GCCAGGAGGGAAGCCAGACCAATCGGCATTGG 36382 29 100.0 32 ............................. ACAGATTCGAAATCGAAGAGAAGCTGATCAAG 36443 29 100.0 32 ............................. CGCACGAACGGCAAGTTCTGCCGCGGCTATGA 36504 29 100.0 32 ............................. TTTACGCACATGCACAAAGCATAGGCGTTTGG 36565 29 100.0 32 ............................. GCGAAGGGCTGGGCCGTGTACCTGCTCACCCT 36626 29 100.0 32 ............................. GCGTGATGTCCGGCGGCTGGTTCTTCGACGAG 36687 29 100.0 32 ............................. TCCTGGCCCTTCGCGTGGGTGGCCGAGGACTG 36748 29 100.0 32 ............................. CCTTTCAGCTTCGTCGCCTCGTCGCAAACCAC 36809 29 100.0 32 ............................. GCCCAGCTGTACAGCTCCCCGTCTATCATCGT 36870 29 100.0 32 ............................. TATGCCGGCTATCGAAAACGCAGGGTACGAGA 36931 29 100.0 32 ............................. CCGGCGCAGCAGCTGCCGCCGGTGGATACCTC 36992 29 100.0 32 ............................. ACTAGGTCAATCGTGACTAGGCGCAATGAATC 37053 29 100.0 32 ............................. GCAGCGCATCTGATCGCGACCCTGAGGCATTG 37114 29 100.0 32 ............................. TATGTCATCGACAGCGACGCGCCGTTCATCGT 37175 29 100.0 32 ............................. CGTGTCGGCACTGCTCCGTGGCGGCGGCCAAC 37236 29 100.0 32 ............................. AGGGCGAGCGGAATACGGCCTACCAGGACAGC 37297 29 100.0 32 ............................. GCCAGTTTTCCCCGAACGCGTCCCGCGATTTC 37358 29 100.0 32 ............................. CTGCGCATGCTCAAACCGCCGGAGCTCTACGG 37419 29 100.0 32 ............................. CCCTTGGTGTGGCTGATCTGATGCGTGGCGGA 37480 29 100.0 32 ............................. CCATTGACCATAGTCGACGTGCCCAGGACGGC 37541 29 75.9 0 .....TG.....A.A.C.......GG... | ========== ====== ====== ====== ============================= ================================ ================== 29 29 98.9 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : CCTGCTGGCGCAATGGCTGTACAACGTGCCGCCGCTGTTCCACCTGTCCGCCGCCAGCCTCAAGGCCAGGTTGCCGCAGCTGCAATGCGCCGACCAGGCCTTCAGCCCCATCCACCGGCAACTGGCCACCCTGGCGCTTACCGGCTTCGCCTGGCTGAATGCCGAGCGCACGGTGCAGCAAACCCGCTTCGCCGACGGCAGCCGCCTCACCGCCAATTTCGGTTCGACGGCGGCGGGCGATGGCGGCCAGGCGCTGCCGCCGCAAAGCCTGCGGGTGGAATTGGCCGGCCAGCCGTCCAGGCTGCTGCGGGTGGCGGATTGCGCCGGCACATAAGCTGCGGCGATAATGCCGATGTCGTTTTGCGGCCGTGGGGGGCATGCTCCCCGCGGCCGGCGGCTGGCTGGCGTGATGTGATTTGGATGGCGGTTTTTGAGTCGGGAAAATCGGTGGAATTCCGGGTGTGGTTTTTATCTTTAAAAATCAGCAGCTTGAGAATGGT # Right flank : GGCCAGCAGTGGAACGGACAGCGTAACGACCCCGTGCTCCCCGGGTCATCAGAAATGTGTCGGTCCGCCATCGCGGGTCTTGTGGTTGATGGCGAGGGGAAGGCTGAGCTTGTATAAGGGTGGCAAAATGCCGATAATTGATGTGCAGATTGCGCCAATTGGAGGTTGTCATGCCCACACGCACCGCATTCAGGCCGGACCCCGCCATCATCCGCCGCGCAATGGTCAGGGAGGGGGAGCGCCGTTCCCGCCAATCCGATCTGTTGGGCCAGCCTGTCAGCACCGATTACGACATCGTGAAGGTGGTGGCCAATGGTTTGGACCCAGGCGTGATCACCCGCCTGACCAATGAGGGGTTGACCCGGCGCGAGCTGGAGTTTGTCATTCCCCCGCGCACGCTTACCCACCGTATCAAGAACGGCGAGCGCCTTAGCACCGACGAGTCCGAGCGCAGCGTCCGGCTGGTCAATCTGCTGTTGCAGGCCGAGCAGCTGCTGGGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 48050-52105 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKCT01000083.1 Chromobacterium sphagni strain IIBBL 14B-1 Cmus_14B-1.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 48050 29 100.0 32 ............................. CCCCGGCGGGCGGGGCTCTTTGTTGTTGCGTT 48111 29 100.0 33 ............................. TAGTTAAAAACCTTGACGTGATTATAGCGGCTG 48173 29 100.0 32 ............................. TTGGCTTCAGCACACGCGAGACCTCGGCCAGC 48234 29 100.0 32 ............................. GTAAAAATACGTAGTTTGGCGGACTTTTTATC 48295 29 100.0 32 ............................. ACAAGCCCATTGCGCGTCATACCCCAGCGCGG 48356 29 100.0 32 ............................. GACGGTTGGCCGTCAGGTTGTCTACCAGTTGC 48417 29 100.0 32 ............................. TGGGCGAGGCCGGCGAGTTCGAAATCGGCGTG 48478 29 100.0 32 ............................. ATGAAGAAAGAATCCCTCAGGACTGCGATGGA 48539 29 100.0 32 ............................. CTCATGGCTGACCTCATCTGCCCGCACTGCGG 48600 29 100.0 32 ............................. GCCTTATGACCGTCGTGGTGGCTCACCTCGTT 48661 29 100.0 32 ............................. CAGTCTAATATGGCCGTTGGGATGCCGGCCAT 48722 29 96.6 32 ............................T ACTGAAAGCGGCGGACGCGGAGGAGGTCCGCG 48783 29 100.0 32 ............................. TCACGCTAAGAACCCAAACGCACACCACAAAG 48844 29 100.0 32 ............................. ATCATCATGGACCCCTTGACACAGGCGCGTTC 48905 29 100.0 32 ............................. GGTCAGGACTTCGACGTCGGCTACCAGCTCAG 48966 29 100.0 32 ............................. CCGCGTTGCGCGAACTGGAGAGGAACCAAATA 49027 29 96.6 32 ............................T TGATCCTGAGCGCTTGGGACAGCACGGTGCCT 49088 29 100.0 32 ............................. CAAAATGACCTACCAAATCGGATTCGACAACA 49149 29 100.0 32 ............................. GAGAAATGACATGAGCGATGGACAGGGCCATA 49210 29 100.0 32 ............................. AACGACTTGTGTTCCTTCGACAGCTTGCAGTC 49271 29 100.0 32 ............................. GCGTGGCTGAAGAATACGCATCCGCACCGATT 49332 29 100.0 32 ............................. GCTTATACCGTTTTATTTCCGGATAATACTCC 49393 29 96.6 32 ............................C GGCCAACCTGCAATGCGGCGTAATGTACGTAA 49454 29 100.0 32 ............................. GTGGCTCGCACCGGCTGGAACGGCAAAGGGAT 49515 29 100.0 32 ............................. GGTCTAGACAGCATTTCTTCTTCCAACCTGTT 49576 29 100.0 32 ............................. CGCAGCTGACTGCCATGGCTGAGCTGATGCGG 49637 29 100.0 32 ............................. GCGCGCGAGCCCTACGATTTGATCGTGATGGA 49698 29 100.0 32 ............................. GTTATTGAGATATCGCCGCTGGCCTGCCCGGA 49759 29 100.0 32 ............................. CTCGCCTTTAGACCTCCTGGCCACCCCGGGCG 49820 29 100.0 32 ............................. AACCACCACTTATCTAGCTGGTACATCCCGGA 49881 29 100.0 32 ............................. ACCCCGCGCTGCTGCTCCAGCTGATGAAGGGC 49942 29 100.0 32 ............................. CTGGCGAACCGGATCGCAAAGAAGCAGCAGCA 50003 29 100.0 32 ............................. CCAGGCGAAACCGGAGCGGCAGGCGCACCTGG 50064 29 100.0 32 ............................. TGCCGTGTGATACCTCCGGCATCATGGGCTGG 50125 29 100.0 32 ............................. AAACTGCCCAATAGAAGGATTTCAGAGGCCAA 50186 29 100.0 32 ............................. TTTTGGCTCACGGTATATGGCCCCGATCCGCT 50247 29 96.6 32 ............................A AGAGCGTCAGGACATGCTGGCTGCTTTCAAGG 50308 29 100.0 32 ............................. GCCTGAATTTGTCGGGCGCGCAGGGTAAAGCT 50369 29 100.0 32 ............................. GAAATCTCCTATTAATCGGTAACGGAGCCGCC 50430 29 100.0 32 ............................. GGCATGGACGTTAAGTCTATGATGGCTCGTGC 50491 29 100.0 32 ............................. GCCCAGGCGTCGCAGCCTCGGCCGCCGCGCGC 50552 29 100.0 32 ............................. TGCAAGGTGCCGATGCCCGCGCCGTCTCCCTG 50613 29 100.0 32 ............................. TCCGGAATGATCACGCCCACGAGTGGTCCAGG 50674 29 100.0 32 ............................. TCAGCGTTGTCGAATACCAGGACGGTGCAGAC 50735 29 100.0 32 ............................. GGTGATAGAACGTCAGTGATTCCGCCAAAAGT 50796 29 100.0 32 ............................. TCGCTGCCGGGCGACCAGGTGCTGCAGGCGCT 50857 29 100.0 32 ............................. CCAGTTGGCATCGTCGAACGCCCGCATCTGGA 50918 29 100.0 32 ............................. GCGTATGCCTCCACGCTCCAAGTAACCCCATG 50979 29 100.0 32 ............................. GGCATCTCATTTTCCCGGCCGATGAGGCCGCG 51040 29 100.0 32 ............................. AGAATCCGAACTCCAAGAGCGCGCAAAAGGCG 51101 29 100.0 32 ............................. ATAAACGACAGAAACAGCGCAAATTTCAACGC 51162 29 100.0 32 ............................. GCCTGCTGCCAGGGGGGATGTGATTCCGCCGG 51223 29 100.0 32 ............................. CCAAAGCTGAGGAGGAAAACCATGGACTACTC 51284 29 100.0 32 ............................. CAGCTGGGCGCGCAAGCGCTAAACGCAGTCAG 51345 29 96.6 32 ............................A GTGTCGAAATCGTCGTCGACCAAATGGTTGAC 51406 29 100.0 32 ............................. GCCGCGACGACATTGGATGAGGCTTACCCCGA 51467 29 100.0 32 ............................. ATCGAACAAGGCCGGCAAACTCATGCTTTTCA 51528 29 100.0 32 ............................. GAAATGAGCTATCCCTGCATCGCAGACTTGAT 51589 29 100.0 32 ............................. GTGCGCACGTCATCCCAGATCGGGAAACGCGG 51650 29 100.0 32 ............................. GGCGATCTGGGTTTACGCGCTCGGCCACGTCG 51711 29 100.0 32 ............................. CGTTCCGGGCAGGCTCTGGCCCTCCACCTGGC 51772 29 100.0 32 ............................. AAACTTCTAGAATGGGAGCGGCAGAAATTCGA 51833 29 100.0 32 ............................. GGATTGGCAACGGATCGCAGCCGCCTGCCAAC 51894 29 100.0 32 ............................. CCGCCCGGTACGGATTGTCAGGCGTTTTTTAA 51955 29 100.0 32 ............................. GCTGTTTTGATGAATAGGCCTTTTGCCTGATC 52016 29 100.0 32 ............................. GCTCGCAAGCGTTCCCAGGAATGGCTGGCCAC 52077 29 93.1 0 .........................G.A. | ========== ====== ====== ====== ============================= ================================= ================== 67 29 99.6 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACATCGAAACCCTGCTGGATGCCGGCGGCTTGGACAAGCCGGAGGCGGAGGGCGTGGTGGGGGCGGCGTTTCCGGAAGACGAGGGGCTGGGCGATGCTGGTCATCGTACTTGAAAACGCTCCGCCCAGGCTACGCGGCCGGCTGGCGATCTGGCTGCTGGAAATCCGCGCCGGCGTCTACATCGGCACCTACAACCGCAAGATCCGCGACTACCTGTGGCAGCAGGTAGAGGAGGGGCTGGAGGACGGCAACGCGGTGATGGCCTGGCAGGCGGCCACCGAGGCCGGTTTCGACTTCGTCACCCTAGGCGCCAACCGCCGTATGCCGGTGGAGTTCGACGGCGCCAAACTGGTGTCCTTCCTGCCTCCGCCTGCGTCGCAGGAACCGGCGGCGGAGTAGTCCGCTTTTCACCCTGCCGAAGGCTGGTTTGGCTCTTTAAAAATCGGTAGATTTTATCGCGCTATTTTTGTTTTTAAAAATCAATTACTTGAGATTGGT # Right flank : GGCTTCGGAACAGTTCGCGCTGCCCTTTCTCGCTAACCCCTTTTCCGTCAGGGGAGGTAGGCCTGTCCAAGCGGTTTTGCTGGGCGGCGCCAGCAGCGCGCGGTCTTGCTGGCGGTTTGCTGGCGCCGTGGGCCGGCCTTATTTGTCGGCGTACAGCGTGCCGGCCTTGGCCCAGTTTTCGCGCGATACTTCGTTGATCAGGATGTCCACGCTTTCCGGCGGGCAGCCCAGGGTTTCCACCATGACGCGGGTGGCTTCGCTCGCGAAGGCGCGTTTTTGTTCCGGGGTGCGGCCGGGTTGCAGTTCCAGGTGCAGGATGGGCATGACAATTCTCCAGTGGGCGGCGCCGCGAAGCGGGTGCCGATGAGGCCAGTATCATCCAGCGCGCGCCGCCGATAAATATGCCATGATTTGATACATTCCAAACCTATGGGTTGTTAATCATGGACAAGCTGGCCAGCATGGCGATGTTTGTGCGGGTGGTGGAAAGCGGCAGCTTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //