Array 1 46252-50336 **** Predicted by CRISPRDetect 2.4 *** >NC_011297.1 Dictyoglomus thermophilum H-6-12, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 46252 30 76.7 31 AA.......T.T.....G.......A...T AAATTTTGTAGCGTTTATGTAGTGTTAACGA T [46272] 46314 30 100.0 36 .............................. AGTGATAGTGGAAAAGTACAAAGTGGATCTTTGTTC 46380 30 100.0 35 .............................. AGCTTTTCAAAAATCTGATATGCTCTTGTCCTAGA 46445 30 100.0 36 .............................. AATGTAAACATAAGTGATATATATGTAACAGTAATT 46511 30 100.0 36 .............................. TTAGTTGCGAAGTTCATTCTTAAAAAAGTTAAACCT 46577 30 100.0 39 .............................. GGTACAGTTAGGAATGAATATGCAAGGCACTTTTAACTC 46646 30 100.0 37 .............................. AGCTCTCCCAAGATGGCTAATAAAGGGGGTTAGAAAA 46713 30 100.0 36 .............................. AAATTTACAGGAATAAGAAGCAAGATTTTTACTTTT 46779 30 100.0 36 .............................. TGGAAACTTTTTTTAGCCCCGTATCCTATGAATTGC 46845 30 100.0 36 .............................. GTGTAATACCAAAAAGAGTCTAATAAATCATTTGGC 46911 30 100.0 36 .............................. TATAATTTGTGAATAAACTACAAATGACCAATCGTT 46977 30 100.0 36 .............................. CTCCCTGATTTTATGTACGAAGCTGACGTTATTTTT 47043 30 100.0 36 .............................. GGTGCAAAACCTCCCGTATCAACCAAAAAAATTGCG 47109 30 100.0 37 .............................. AGGAGGTGATATAGAGGTGAGGATAAGAAAGATCACA 47176 30 100.0 37 .............................. ATATCTCTCTTATGCGGGGAAGAGCGACACCACGTAG 47243 30 100.0 38 .............................. AAGCCCCCCAGCTTTCCAAAGATGAGTAAGCCTAGAAG 47311 30 100.0 38 .............................. TTGTCCTCTCACCTCCCTATCACATAACAAGTTAACTT 47379 30 100.0 37 .............................. TATATCGTTTCAAAATCAATCCCAACGTTGCAATTCC 47446 30 100.0 37 .............................. GGAGAAGCCTATTCAGAAGCCTGAGATGATCCGCATA 47513 30 100.0 38 .............................. CTTTTTCTACCGCCCTTATTCTTTTCCTTATTTTTCCT 47581 30 100.0 37 .............................. ATTTGACTGATGAGGAATGGGAGAAGGCGAGAAGGCA 47648 30 100.0 36 .............................. TTTTACCCTTCTCCTTTCATTTTCTATTTTTGTAAT 47714 30 100.0 37 .............................. AAAAATAAAAAAAGTAGGTGAAAAAGAATGTTATATC 47781 30 100.0 36 .............................. GGTGCAAAACCTCCCGTATCAACCAAAAAAATTGCG 47847 30 100.0 36 .............................. GTCTCTTCTTTTTAGGTGTAGCTTTTTGTAACCCTT 47913 30 100.0 38 .............................. AGGTTGGACATGCGTTCCCAATCTGCGAAGAATACAAA 47981 30 100.0 36 .............................. GAGGTAGAGCTTGCAGTTCCTTTTGCGCCGTTCCTT 48047 30 100.0 36 .............................. AAGCTTTGGCAAAAGATAAAAATAGAAGTAGCACTG 48113 30 100.0 37 .............................. TTGCTTTTCGTAGTGTAAGGTCAATTGTGCCGTAGGT 48180 30 100.0 36 .............................. AGTGGTGTGGGAAGTTCTAAACTAAACCAGTGATAA 48246 30 100.0 36 .............................. AGAGATAAATCTTTCTGAACGATACATTGCGAGGAG 48312 30 100.0 36 .............................. CGGAGTGTTAGGGTCAAAATTGGAGTGTTTTTCCAG 48378 30 100.0 36 .............................. GATGGACTGGTAGAGAATATACATATTACGAAAGGG 48444 30 100.0 36 .............................. TTGCGCTTCTAAGAGTTTTCATAGGGGGGAGGTAGA 48510 30 100.0 36 .............................. TGGGACGGCTTGCGCCGTCCCAAGTTAAAACTCACA 48576 30 100.0 41 .............................. AATAAAAAAAGGAGGAATGTAAAAAATGGCTGAACAAAAAC 48647 30 100.0 36 .............................. GGAAGTTCTCTCGATATGCCTTAAATTCATTCACAA 48713 30 100.0 36 .............................. TCAAGATCTTGCCAGTGTATGCAGAACTGAATTCAA 48779 30 100.0 37 .............................. AGCTTCTCTAATAGCTCTATGATCTCTGGATAGACTA 48846 30 100.0 36 .............................. CAGTAGGATTTTGGAGGATAGACAGCACATATGGGA 48912 30 100.0 38 .............................. CGTAGAACAGGTGAAGGAGTGGAAAAGAAGTTTAGAGC 48980 30 100.0 37 .............................. TCTTTGCTCCTGGTTTACACCACTCAGGAGCAAAATC 49047 30 100.0 36 .............................. TGTTCTGTACGCTCTTTATGTAGATACCAGCCTGTT 49113 30 100.0 38 .............................. TGCGCTCTTCGTTTGCTTTCGAGAGCGTTCTGCCTACT 49181 30 100.0 36 .............................. GAGGAACCGCAGAAAGACAAAACGTACGTTATAGGC 49247 30 100.0 36 .............................. GACATCTTTTTATGAAACCTAAACAAATTCTTATTT 49313 30 100.0 36 .............................. CTACTTATCCAGACCCTGAGAAAAAAGAAATTTTCA 49379 30 100.0 38 .............................. TTTGCCCGACAATACTCTATCATTTCTTTTAATTCTTT 49447 30 100.0 37 .............................. AAAACTTGAAAAATTTTCTTAAAAATATGGCTAAAGC 49514 30 100.0 35 .............................. CCATTGTGCCAATAGGAGCTTCAGGTCTTTCGTCC 49579 30 100.0 36 .............................. ATTTTGGCAGTTAAAACATCAAGCTTTTGGAGAAGT 49645 30 100.0 36 .............................. TATGATTTGAGAATATGCAAGGTAAGACCAATCGTT 49711 30 100.0 36 .............................. TAAGCCTTTGTGCTTCTTCATAAGGAAATCCTGCTA 49777 30 100.0 36 .............................. CTACGTTTGCAAGTAGCGGTATGCTATTTAATAGTC 49843 30 100.0 36 .............................. ACCTCAACCCTACCATAAATATCAACCTCATCTCCC 49909 30 100.0 36 .............................. TTGCATACGGCGCCAAGAAGGAGAACCTAAACAAAA 49975 30 100.0 36 .............................. CAAGGCATATAGGGAAGGGATTACGGATGTCTGGGG 50041 30 100.0 37 .............................. TTGAATGGGACTTGGGTATCGAGCAAATAAGACATAA 50108 30 100.0 36 .............................. AAGAAAAAGAGGGGAAGGAGAGCCCAAGGAGAAAAC 50174 30 100.0 36 .............................. ATAATGAAATCTTTAAGCTTTTCTTTTGTTCTCCTT 50240 30 100.0 36 .............................. GGATAACCAAGCACATCATCGGCAAATTTAGGATCT 50306 30 86.7 0 ..........................GTGT | A [50330] ========== ====== ====== ====== ============================== ========================================= ================== 62 30 99.4 36 GTTTGTAGCGTGCCTATAAGGGATTGAAAC # Left flank : GCAAAAGAACTCCTAATAAGTGGAGGAAAGGTAGGAGAGGTAGCAGAAAGGGTAGGCTATAAAGATATAGATTATTTTATTATGAAGTTTAAGAAATATACGGGAAAAACTCCCAAAAACTATATTAAAGAGATAACAGGTTCACTTTAAAATTTGTGCTTATTTTCTGAATTTTTCCTCTTGAGCATTTTGTTACAATTGGAAATCTATTTTAATTATGTATTTTACTATATTTTTTGAGATCGACAGAAAATGTAACAAAAATTTTAAGGGAAAAACGGATAAAATGTAGGTAAATACTATTTTTCATTTAATTTTAACCCCTAAAATGTCATAAATTGTGTTGATATCTAATTTGGACTTTATTTTATCTTATTCTTAAAAGTTTATTTTTCTGTCGACCTCCAATAACCCCAAAACCCCGGGGGATCGACAGAAAAGTAATTTTTAGCATGAAATCCTCTTTACTACTTAATTTTTTTGTGATATATTATCCTTAA # Right flank : TCAAAATTTGACCTTTTGTGGTCTCTTGAATGTAAAAAAAAGATAGAATGTAAAAATATAAGAAGGGCAAATCTCCTTATCTTCCTAAGATCTTAAATGTTATAGGATAGTTTAATTTTTCTACCTTAGGAATCTTCACCTTTAATCCTTCTTCACTTCTCTCAAATCCAACTTCTCCTTTTAACTCCAAAATTTCCACCTTTGCTATTTCCTTTTGATAAAGGGTAAGGTCAGTACTTAGAGATTTTATTATTACCTCATCTTTTTCTGGTTTGTTCATAAGAATTGCATAAAGAATATCTCCCTTGGTGGTAAATCTAAAATCTTTGTCGGTGTAAATAACCTCTTTTTCACTGAAAGATCCTACATTCCCTTTGGTAGGTCCTTCTCCGTAAATTCTCCAGGGCCTTGAGCCGTATATGGCTTCGCCATTTATAAGTAGCCATTCTCCTATCTCAAGGAGGGTCTTTTGAGCAGGCTCTGGTATTGTACCGTCTGCT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCGTGCCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : NA // Array 2 73144-71018 **** Predicted by CRISPRDetect 2.4 *** >NC_011297.1 Dictyoglomus thermophilum H-6-12, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 73143 29 100.0 36 ............................. TGTACTAAGGGAATAAGGGCAACCTTAAAATCGGAA 73078 29 100.0 38 ............................. GTGCGTAATGTGGAGGGTGGAAAGAACCACCTCTGAGA 73011 29 100.0 37 ............................. CTACTGTCCTCGCCACTATCTCTCCACTCTCAAGCCT 72945 29 100.0 36 ............................. TTCTGCAAACATACCTTAAGGAAGTTGCTTGTTATC 72880 29 100.0 38 ............................. TCTTTTTGCCTAATCGGGAATTGTGGTAGTTCCTCTGT 72813 29 100.0 36 ............................. GACATTTTGATAACCGCACCAGGTCTAACAAAAGCA 72748 29 100.0 35 ............................. AATGATCAAGAAAAGAAAGTTTATTTCACATTTCA 72684 29 100.0 37 ............................. GTCGTGATATTTGTTTTTTGTTCTTGTCTTCTCATAA 72618 29 100.0 37 ............................. GTAGAGGGCGGGGATGTTTTTATGTTGCCATATAACC 72552 29 100.0 36 ............................. GCAGAAAGCATTAACTGCCGTTGTACTCTCGCAGCA 72487 29 100.0 37 ............................. TCATGAAGTGAGAGTGAAAATTTGTGGAATTGTTGGA 72421 29 100.0 36 ............................. ATTATTTCTCTACTCGATAACGGAAACGAGTATATG 72356 29 100.0 36 ............................. TTTCTTCTTTTTCTGTAAAGTCTTTTGGTTTTGGCA 72291 29 100.0 38 ............................. CGAGTAAGCAATGAAAAATATCCCTCCTGAATTACTGT 72224 29 100.0 36 ............................. CTTTACAAAAGCATTCTTGAGATTATGGAGAAGGAC 72159 29 100.0 37 ............................. TCAACGTTAGGAGTTCCGTATTTATCGAACTCGCTAT 72093 29 100.0 37 ............................. TTGGAAACCACGATTGATTTTGTTTCTTTTTCTTTCA 72027 29 100.0 37 ............................. CTGCGTTAGAAGTACCAATTGAGTATCTTTTAGGCAG 71961 29 100.0 37 ............................. TTTTTCTTTTTAGGTAGAATAAAGCTCTTTAGCTCTG 71895 29 100.0 37 ............................. ATCTTTATAAACATTTAACCACCCCCTACAATGGTAA 71829 29 100.0 36 ............................. AAAACTTACTATGCTTGATGACAAGATTTATTTGAA 71764 29 100.0 36 ............................. TTCTCCAACACCTTCATGTTCAAAATTTCCATCATC 71699 29 100.0 37 ............................. AAGAAAGAGAAGACTGGAAAGCGTACCATTACACAAC 71633 29 100.0 37 ............................. TACCTGCAACAAAAAGTTTTAGAGCATCTGCAGTCTC 71567 29 100.0 36 ............................. TGCTACAACAAGCGCTTCAGGGTTGGCAGGTACTGG 71502 29 100.0 36 ............................. AATTTTGACACTCTATATATAGAAGGGGATGTTAAC 71437 29 100.0 38 ............................. CCTGAAATTTTAGGAATTATAGAAAACTCAAACCGCGC 71370 29 100.0 36 ............................. TTTGCGTCTTCAAAAACCTTGTTTACACGCTTAGAA 71305 29 100.0 36 ............................. GCTGTTGCAAAGACAATAGACTTGCGAGTAGAAGGA 71240 29 100.0 35 ............................. TCCTTTTCTACAGAGGCTTTTATTTTTTCTCTCCC 71176 29 100.0 37 ............................. GTGATTGGAAAGATGCTGATTGGGATGAAGATGAAAG 71110 29 100.0 35 ............................. CACGAATTGCTGAATATTGAATTAATCGATAGTGT 71046 29 89.7 0 ..........................TTT | ========== ====== ====== ====== ============================= ====================================== ================== 33 29 99.7 37 GTTTGATCTGAACTATGTGGGATTTAAAC # Left flank : TTAAAAGCCTGGTGGTAATAGTGTTCGTAATTGTAACCTATGACATAAACGAAAAAAGAGTAGACAAAGTTAGAAGAATACTAAGAAGGTACCTTAGTTGGGTACAAAACTCAGTCTTCGAGGGTGAAATAACTATTGGAAAATTAGAAAAGTGTAAAAAGGAATTACAATTCGTAATAGTACCTGAAGAAGATTCAATCTATTTTTATATTATCGAAAATAAAAACAACTACATAAAAAATGTGTTAGGAATCGAAAAAGATTTGGACTCTTATGTTTACTGACTTATTAATCCGCAAACCTCATTTTATAACTCTCTTGGAAAAATACCTTAAAAAATCAGGCCTTTTGTTAAAAATTTTGTACCTACAAAAAATCCTATCCAGGGGTTACTGCAAAAAATTCTCTTACAAGAGTCTATAATCATAAGAATTTTTAAGCAAAAACAAAAGTAATTTACTTATGTTATAATTAAAAGTACTCATAAATATTAACGCTGG # Right flank : TTTCCCTATTCCTTCTTCCAAAATTTTAAGATAATAATTTTGAAGATCTTTAACATATTCCTTAGACAAATCTTTCATTTTCATGCCTTTACTTCGAGTAAGGCTTACTAAAAATTTCTTAAAAGCCCAAGAAGTTCCTTCGATAAATGTCATTATCATCTCAGGAGGAATATCATCTCTTATAAATCCTGCCTTCTGATTTTTTACCACAAAATCGTACAAAATATTGTGAGTAAGTTTTTCATAGTACTCTCTAATTTCCTCTCTATAAGGTGAATCATCATAAAAGGCTGATTTTTCTAAGAGTATATACTCATAGGGATATTTCAATAAGAAATCCCAATTAAATTCAAAGGATTGCTTAACATATTCCAAGAGACTTATATTTTCAAAATTTACATCCTTTAATATTTCCAAACTCCTCTTTGTTGCACTCTCTATAGCATAGAAATACATATCCTTTTTATTCTCAAAATATTGATACATACTTCCTTTTGCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGATCTGAACTATGTGGGATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 3 178426-182925 **** Predicted by CRISPRDetect 2.4 *** >NC_011297.1 Dictyoglomus thermophilum H-6-12, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================= ================== 178426 30 80.0 31 AA.......T.T.....G.......A.... AAATTTTGTAGCGTTTATGTAGTGTTAACGG T [178446] 178488 30 100.0 38 .............................. CTGTGAGGTGAAAAGATGATAAATACAAAGCTTTTTAA 178556 30 100.0 36 .............................. TTTGTCATTGCTATCCCTCCTTTCGATGAAATAATC 178622 30 100.0 37 .............................. TATAAAATGAAATAATCAAGAATAGTTTCTGTTTCTT 178689 30 100.0 38 .............................. ATGTTGTCTATTTTTTGCTCTAGCTCGTCCAGCTTCCC 178757 30 100.0 38 .............................. CAAAGTGAAACAGAGAAATATAAAGCTGAAAAAGAAGC 178825 30 100.0 37 .............................. TCCTCTACACCTCTCTCCCCTACAAGAATGTCTGGAA 178892 30 100.0 37 .............................. TTGTATCGCCTCCCATCCTTAGTTTTGCTCAGTTTTA 178959 30 100.0 36 .............................. CCCCATCCTCTTCTACATCCACAACAAGTTTGCCAA 179025 30 100.0 37 .............................. AACATTAGCATTAATAAAATCTTAGCCACTTGGCCCC 179092 30 100.0 36 .............................. CTTCGAAGGTTTGTTGCAAAAAACTGAAGGAAGCTG 179158 30 100.0 36 .............................. AGCTAAAATTTGAAGAAATAGTTGGAGAATTAATTA 179224 30 100.0 37 .............................. GAATTCACCATTCTATTCACTGTTTTTCTCTACCTCC 179291 30 100.0 38 .............................. ATTGGAGGTAGAGTTTGAAGTAAGTAGAGACAAGGTGA 179359 30 100.0 35 .............................. ACTGATCCAATTCTCTCTCTCTTCTTACTATCATC 179424 30 100.0 36 .............................. TTGCGTCTGAGACAATTGGTAAAACATTCTGAGCAA 179490 30 100.0 37 .............................. GGTACAGTTAGGAATGAATATGCAAGGCACTTTTAAC 179557 30 100.0 36 .............................. ATTCTTCTTCCGTTATCTGCTCGAATATTTTTTGTA 179623 30 100.0 38 .............................. GGATGGATGCAGGTAAATTTCTAATTGTAGGCTTTAAA 179691 30 100.0 36 .............................. TCCGTGTGTACAAAAGATTGTGTAGCCTATTCTTTT 179757 30 100.0 36 .............................. TTTTGGAGAACCAAAAAGAGCTAAAACATATGATTG 179823 30 100.0 36 .............................. CTTCTATAAGTTCTTTAATTGCTTCCTTAATCTCTT 179889 30 100.0 36 .............................. TTGCGTCTGAGACAATTGGTAAAACATTCTGAGCAA 179955 30 100.0 38 .............................. ACCAAAAAGATGCAAAAAGCAAAAAAATGGCATGGAGC 180023 30 100.0 45 .............................. AGTTTTTCGATACGATGTCTATGCCTTCAATATCAAGCTTAAACA 180098 30 100.0 36 .............................. TTTTCCACTGACCAAACATTATATGTTAGTGGCATA 180164 30 100.0 37 .............................. CTGGTAGGACGTTAAGACTATATGAAAATCTCTTAAG 180231 30 100.0 37 .............................. GTTTGTGGCGGATAATGACCAAATTTCCATATAATTT 180298 30 100.0 37 .............................. TGCAATACAGCTTGCGAAATTAGAAGCAATTGCAAAG 180365 30 100.0 38 .............................. AGCCCTCTCCATTCTCTATCCCATTCTCCAAAATCCAA 180433 30 100.0 36 .............................. TCTCTCAGGCTGGTGGAAAAATCACAAGGAATTATC 180499 30 100.0 38 .............................. ACCTAATAGCAAACGAATATTTTGACACGCCAAGCGCT 180567 30 100.0 37 .............................. GACACTCCCAACTTTTTCCGAGTCTCAGACCTAAGAG 180634 30 100.0 37 .............................. GAGCGTGCGGTCTTAAAGTCGTCGTATATTCTCTGCA 180701 30 100.0 36 .............................. CAATACAGAAAAAGATAAACTTCAGGAGGGTAGTAA 180767 30 100.0 36 .............................. CGTCTTGCCTGTTGCTGCGCAATTAGGAGTATCTTT 180833 30 100.0 37 .............................. TTTCACACTTGGTTCTGGTGCAAGAGCGCTTTACCCA 180900 30 100.0 37 .............................. GCAGCAGAGGCAACCGCAATAATGATAGACATCGTGA 180967 30 100.0 37 .............................. GAATCTTTCTTAAGCATCTCCTCAAGGCAAATAGAGT 181034 30 100.0 37 .............................. AGTTTGAAGGAAGCTTCATCTTGTAGCCTTTTTATCT 181101 30 100.0 37 .............................. GTTTTTTAATCGCTTTTTAGCTTTCAGGTTTTTGCTT 181168 30 100.0 35 .............................. ATATTTCTATAGAAGCCCATGGATATCGCACCTCC 181233 30 100.0 36 .............................. GTTTTTCTAGGAGTTCTACAACATCGTTTGCAAACT 181299 30 100.0 37 .............................. CAGGCTCGATACTTACCCATGTTTTTATGCCTCTCTT 181366 30 100.0 36 .............................. TTTAGCTGGCAATAATCTAAACAATTTTTAAAATCT 181432 30 100.0 37 .............................. TTATCTCCCTCGCCACTGAGAATGATATCTTCCCCTC 181499 30 100.0 37 .............................. CTGGTAGGACGTTAAGACTATATGAAAATCTCTTAAG 181566 30 100.0 37 .............................. GTTTGTGGCGGATAATGACCAAATTTCCATATAATTT 181633 30 100.0 37 .............................. TGCAATACAGCTTGCGAAATTAGAAGCAATTGCAAAG 181700 30 100.0 38 .............................. ATTTTCTCTTTTCCAAAGCACGCTTTTCCAATTCACGC 181768 30 100.0 36 .............................. ATGGAAAAAAATGCAGAAGCCTCTCAAACATCTCAA 181834 30 100.0 36 .............................. GAGGTAAATATGTATACATTCCATATTTTGCTCAAG 181900 30 100.0 36 .............................. TCCTACAACGCTGTCTGCGTCCCATTCCAAAATCTC 181966 30 100.0 36 .............................. CACCACTCTATCAGTAGCTCCTTCTTGTTCTGTGGA 182032 30 100.0 36 .............................. TCCTTATTTATTATTGTATTCTTTCTTTTTATAACT 182098 30 100.0 37 .............................. ATAACATAAAGTGAAACTGAGCGAGACATCCCTGAAC 182165 30 100.0 35 .............................. AGGAGTGGGAAGAGATAGAAGATGAGTACAATATA 182230 30 100.0 37 .............................. TAGTAGAAAAGAAAGAATAAAAAGAAAGAATAAATAA 182297 30 100.0 36 .............................. CTTGCTGGAAGTGTAATGAGTTTCCCCTTAAAAACT 182363 30 100.0 37 .............................. AGGTTCCCATTCCTTTGTCTTAGTTTCGTCTACAAAG 182430 30 100.0 36 .............................. AAGGAAACGACGTAATAGAGCTAAGAAAATTTGAGA 182496 30 100.0 36 .............................. AAGAATGGATGTAAGAAATTTGTTTTGGAGTTGCTT 182562 30 100.0 36 .............................. AACTTACAGGAGCAAAGGGTTATAGAGGAGATGAAG 182628 30 100.0 36 .............................. AAGGAAACGACGTAATAGAGCTAAGAAAATTTGAGA 182694 30 100.0 36 .............................. AAGAATGGATGTAAGAAATTTGTTTTGGAGTTGCTT 182760 30 100.0 36 .............................. AACTTACAGGAGCAAAGGGTTATAGAGGAGATGAAG 182826 30 100.0 40 .............................. TCTCTTTCCAAGCTTCAAAAGTAATGAAATCTTTAAGATA 182896 30 96.7 0 .............................G | ========== ====== ====== ====== ============================== ============================================= ================== 68 30 99.7 37 GTTTGTAGCGTGCCTATAAGGGATTGAAAC # Left flank : AGTTAACCGAAGCTAAATTTGAGCGTTTAAAAAGGGAAGTTGAACTTGTTATTGATGAAGAAGAGGATTCAGTCATCTTTTACATAATGAGAACTATTAAATATAGTGAGAGACAAATACTTGGTATAGAAAAAAATAAGAGAGAACAGATACTGTAGTTTTTTATTCCTCCTCATTTTACCCACCTCATTTTGTTACAATTGAAATCTATTAAATGCTGTATTTTACTATATTTTTTGAGGTCGACAGAAAATGTAACAAAAATTTTAAGGAAAAAACGGATAAAATGTAGGTAAATACTATTTTTCATTTAATTTTAACCCCTAAAATGTCATAAATTGTGTTGATATCTAACTTAGACTTTATTTTATCTTATTCTTAAAAGTTTATTTTTCTGTCGACCTCCAATAACCCCAAAACCCCGGGGGATCGACAGAAAGGTAAATTTTTGCATGAAATCCTCTTTACTACTTAATTTTTTTGTGATATATTATCCTTAA # Right flank : GAGATAAGATAAGCGTCTAGGCTTATTAAACCTGAAAAAGAGTCTATTTCATGCTTAGCTAAGTTCCTATAGATTGGTTGATCGGCAAAACTTATGTAAATGTGAAGGATAGATTGAGAAGCTCTTTCCCGGTTTTCCTAATCTTAAAAGGAGGTATCTAACTTATTTTTTGAATTTTTTGTTGATGTTGATATATCTAAAAAATCCTTATTTATCTTATATTAAAGACTCTAAAATAAATATTCTCTTCCACAAATCTTTTCCTCAATCCTCTAAGGGTTTTCATCTTTTAACCTCTTCCTTAACCTCAGATCTTCTTCCAATGATAAAAAAATCTAAAAGTAGCATTGGTGATTATCTAACTCCTTTACTTTTCCTTCTGAGGATGTCCTATTTTTTCCTGAATTGGAATATTTTGTTAATCTTTTCACTAAGGGTATTTTTTATCTTCTTTCTTGGGAGGATGAGTAGGATAAGTTTGGTAAGTTCCTTCTCTCTTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCGTGCCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : NA //