Array 1 1087334-1092608 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046671.1 Raoultella ornithinolytica strain 193104922 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1087334 29 100.0 32 ............................. GATTGCAGGGAGTGTGCTTTGTGGCAGGTATT 1087395 29 100.0 32 ............................. TCCATAGCTGCACGGTCTCCTGTGTCGCTGGA 1087456 29 100.0 32 ............................. GCGGCAACACTATGACTGTTATGGAGTACTGA 1087517 29 100.0 32 ............................. CTCTACTACGACAACGGGTCGCACGCAGGCTG 1087578 29 100.0 32 ............................. GTGACGGGCAGATTTACGGGATGTATCTCATG 1087639 29 100.0 32 ............................. CCGATCATAATACGGTCGAGCGACATCTGACG 1087700 29 100.0 32 ............................. GTCAGGATTGATGACTATCGGCCTTGATGGCA 1087761 29 100.0 32 ............................. GCCTCGGTGGATACAGAGAAAAAATCTGCGGC 1087822 29 100.0 32 ............................. GTCATATAAACCCTGCTGAAGAGTGCTCGTAA 1087883 29 100.0 32 ............................. ACTGCTCCTCTTTGCTGAGAGCGCGGGTTTGT 1087944 29 100.0 32 ............................. AACTGGGCGGAGGCAGAGGAACGCGACCGCTG 1088005 29 100.0 32 ............................. GTTATCCCGCTCGCGTATGAGATTGACCAGCT 1088066 29 100.0 32 ............................. CCATAATATTCACCTTAAAAGAATGATTTGAG 1088127 29 100.0 32 ............................. CGTCATAGCCGTTGTCCTGGCAAAAAATCGCG 1088188 29 100.0 32 ............................. CTGATCGACGCGATGAACTATCTCATGTTCGC 1088249 29 100.0 32 ............................. CAGGTGAACTGGTTGTCACAAGTGGTGAACTG 1088310 29 100.0 32 ............................. GATAACACTCGCTCATTCGCTATCAATCTGTA 1088371 29 100.0 32 ............................. CGGAGAATCCAACCTTCCACACGCCATGTTCC 1088432 29 100.0 32 ............................. TTATAACGGGGTCAATCTATGAGCGGTTATCA 1088493 29 100.0 32 ............................. GTATCATCCGCGACAGGCTCGGGCGATTTGTT 1088554 29 100.0 32 ............................. TTGATGGTATCAGTGAAGACATCAAAGAAAAA 1088615 29 100.0 32 ............................. CAAAACCTCTCCGTCAGCCGGAGTTGTGTTTA 1088676 29 100.0 32 ............................. GTTAGCTCCGCCAGCAACATCAGTCACGCGGC 1088737 29 100.0 32 ............................. ACCAGTACCGATGGACGTATAACCGGCCTTGT 1088798 29 100.0 32 ............................. CCTCCGGAAATCGGAGCCGCTTTACTGGTGAG 1088859 29 100.0 32 ............................. CAGTATAAACGCCATTCACGTTCAGGCTTGCA 1088920 29 100.0 32 ............................. GGCGCATAGCCCAACCATTTTGAACAATCAGC 1088981 29 100.0 32 ............................. ACCGCGCCGGTAACGTAGTTCCTAACGCAACT 1089042 29 100.0 32 ............................. AAATCAATATCCGTTTACGCCTGGGTTAAGGC 1089103 29 100.0 32 ............................. GCATCCACCAGCGTCACCATTGACACGCCGGA 1089164 29 100.0 32 ............................. CATTTGTCCAGTAACAACCCGTCTACCCATAC 1089225 29 100.0 32 ............................. ATCATCTCCATGCCGTACCAGGTTTTGCGGAG 1089286 29 100.0 32 ............................. ATGGATGTATGGGTGCTTTTCGGAATGATTCT 1089347 29 100.0 32 ............................. ATAGCTTAAAACTTTATAGGTTCCGTTAATAA 1089408 29 100.0 32 ............................. CCAGCCGGGAGAAGTTTGCAATCCAGTTGCCC 1089469 29 100.0 32 ............................. ACGCACGCGACACATGGCGCAGCGTAAAACGC 1089530 29 100.0 32 ............................. CGGTGTTTACTGGCGCGGTGACACCCGCCCGC 1089591 29 100.0 32 ............................. TACAGGTGAGCTTTTCCCATCCTGGTATGTGA 1089652 29 100.0 32 ............................. CGTTCGAGAAGACCCTTCGCGGTGAGTACGCC 1089713 29 100.0 32 ............................. CTGGCATTAATAGTCACTGAGATGGTTTACAA 1089774 29 100.0 32 ............................. CTCTTTCGCTACCGCCGTGATTACCTCTTTTG 1089835 29 100.0 32 ............................. GTATTTTTAATGGGGGTATAGGATGGGTGTTT 1089896 29 100.0 32 ............................. CCATCGGACACAGGAGAGTTAAATCCGATAGC 1089957 29 100.0 32 ............................. CGATTGATGAAGTCGGTAACATGTTTATTACT 1090018 29 100.0 32 ............................. CCTGACTACCAAATGCATCTACCGCGGCGCCC 1090079 29 100.0 32 ............................. ATTATCTACAGCCAACTTACTACGAATAGAAT 1090140 29 100.0 32 ............................. ATAGCAACCATCGTTGGATGAAAACTGGCTGG 1090201 29 100.0 32 ............................. ACGGTGATCACCCTGACGTTTGTCATTTTTGC 1090262 29 100.0 32 ............................. CACAACGTCGACAACGGCGAGGCTGGCTCTGT 1090323 29 100.0 32 ............................. GTAGTGATGGCGGTGGCTCCGGTGGTGGTGCG 1090384 29 100.0 32 ............................. CGAGAGATCAGGCCAGGAAAATTACCTTCTCC 1090445 29 100.0 32 ............................. AACAGAACGTACTCCCACAGCGTTCTCAGTAG 1090506 29 100.0 32 ............................. GCATCCACCAGCGTCACCATTGACACGCCGGA 1090567 29 100.0 32 ............................. CCTCTTGAAACTCAGGATAGTACGTTAATACA 1090628 29 100.0 32 ............................. ATAACGCTCAGGATATAATCGCTGCCTGATGT 1090689 29 100.0 32 ............................. GAGCGCGGGATCCTGACCTGGGGTTACGGCCA 1090750 29 100.0 32 ............................. TGTCGTTTAACGGGTACGAGTGGTCCGTTGTC 1090811 29 100.0 32 ............................. CGGGATCTGCGGTATCGCGTAACGCAATTTGC 1090872 29 100.0 32 ............................. TCGCCGACGCTACCGCTAACGCCGCGGCCGCC 1090933 29 100.0 32 ............................. CCAACAGAATCCGCAGACAAAATGATGTTTGA 1090994 29 100.0 32 ............................. GATGTGTACACGTCCATCCCTGGCTATGTGCT 1091055 29 100.0 32 ............................. GTCCTTGACGGCATTAATCACTCAGGGCTTGG 1091116 29 100.0 32 ............................. GTACCGTATCAGGGCGTTCGTCCGACGCGACC 1091177 29 100.0 32 ............................. ATACTCGCCGCAAATTTCAGCCAGTTTCCCGT 1091238 29 100.0 32 ............................. TCACTGTTTGTACTTTGACGTTACTTGCTCAA 1091299 29 100.0 32 ............................. GACGCCATGTGACAGTGGATGGTCGCCTCAAA 1091360 29 100.0 32 ............................. ACTGGAACGCACCAGTGCCTGGTCCAGCACCG 1091421 29 100.0 32 ............................. CAATATCAATTTCCCGCAGGATCAACGTCCCA 1091482 29 100.0 32 ............................. CTCATCTCCTTCAAACCATGCCAGCTTAACAT 1091543 29 100.0 32 ............................. CGGCTATTCACACGAAAGCAGCTACCGCACCT 1091604 29 100.0 32 ............................. GTAATCCCAGACTGCAATAACAGTGGGGTAGC 1091665 29 100.0 32 ............................. CGGCGCGTCTGAATGTTGATATTTTAACCATT 1091726 29 100.0 32 ............................. TGTCTGTTTAACTCTGTGGATAACCTGGAGGC 1091787 29 100.0 32 ............................. CCGTTGGTGTTTGTCCTCGGGCATATTGAAAT 1091848 29 100.0 32 ............................. AATATCAGCATGCCGCGCGCTGCCCAGCTCAG 1091909 29 100.0 32 ............................. ATGCCATTGCGAACACTACAACTGCGATAAAT 1091970 29 100.0 32 ............................. ATGACGAAGATGTGATATCTGCATATGCAGGT 1092031 29 96.6 32 ............................A CCACCACATCAGAAGCCGACGATGGCGATGGC 1092092 29 100.0 32 ............................. TTGGATCATTTCTTCTTCAACATTCTCCCACG 1092153 29 100.0 32 ............................. CTTGCTGCACGTTGGGGTATCTCTGAGATCAG 1092214 29 100.0 32 ............................. GCCAGACCAGCCTCGATGATCTGCTGTGGTTC 1092275 29 96.6 32 ............T................ CTATATATTGTCTGGTCATCATCACCGACTAT 1092336 29 100.0 32 ............................. GTTCGGCAATCGCCCTGGTGCTGCCAGTGGAA 1092397 29 100.0 32 ............................. CTTTCACGTTTGCTCATAGGGATTTTTTTTCC 1092458 29 100.0 32 ............................. TGCAGATATTTCCCTGATTTGGGGATCCAAGA 1092519 29 96.6 32 .............T............... GTCCGTGTGCGCGGAATATTCCCGGATGCGTC 1092580 29 93.1 0 A...........T................ | ========== ====== ====== ====== ============================= ================================ ================== 87 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATTGAAGAGGTTCTTGCCGCGGGGGAAATCCAACCTCCAGCTCCCCCTGAAGATTCGCAACCCGTTGCGATCCCACTTCCTGTCTCGTTGGGAGACTCTGGCCATCGGAGTAATTGAGGATGAGTATGCTGGTTGTTGTGACTGAAAATGTACCACCGCGACTGCGAGGAAGGCTGGCTGTCTGGCTACTGGAGATTCGTGCTGGGGTGTATGTTGGCGATATTTCGGCCAAGGTCCGCGAGATGATATGGCTACAAATCTCCGTTTTGGCGCAAGAGGGAAATGTCGTGATGGCATGGGCAACGAATACTGAATCAGGATTTGAATTTCAGACTTTCGGTGAAAACCGACGTATTCCGGTAGATCTGGATGGGCTGAGACTGGTGTCATTTTTACCCATTAAAATTCAATAAGTTAGTGTTCTTTAAAAATACGGAAAGTTTGGTAGGACTGAGTGTGTTGAAAAAAGTCTTTTAGTTCAGTTGCATAGCGTTAGA # Right flank : GCAGCGCTGTATTACTGCCTGGTAACGCAGGGATGTGCACCTTCCCCGTAACAGAAAACGCCGGCTAGCCGCGCTTTTCCGCCTTTGCCAGCTCTTTTATCAGCGGCAGCATCACCTTGACGACATCGCGGCTGCGGTGTTCGATACGACCCGGCAGAGCCTTATCAATATGCTGCTGGTTATCCAGCTGTACGTCATGCCAGCTGGTTCCTCGCGGGAATGAGGCGGATTTGTTGCGCTGTTGATAGCCATCTTTCTTACCCAGAGACCAGTTCGTGGCCTCCACGGACAGGACCGGGATCCCCGCGCTATCAAAAATGCTGGCGTCATTACAGCAGCCGGTACCCTGCGGATAATCATGATTGAGGCCAGGGTTGGTATAGGCGGCAATCCCTTTGCTGCGCGCAATAGCCAGCGCGCGGTCTCGGGTGAGTTTGCGAATCGAGGCGGGAGTGCTGCGCCCGCTATTAAAATAGAGCTTATCGCCAACCACCAGATTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //