Array 1 9974-12292 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHNU01000042.1 Companilactobacillus insicii strain DSM 29801 contig42, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================================================================================================================== ================== 9974 36 100.0 30 .................................... GTTCAACCACGTTAACCAACTGTAAGAAAT 10040 36 100.0 30 .................................... TACGGACTATCTAAGAAAACAGCAACTACG 10106 36 100.0 30 .................................... ATACAAAGACGTCTTTCGATATGTTACAAG 10172 36 100.0 30 .................................... CGTGGTGTTAGATAGACACCATTTAAGTAT 10238 36 100.0 30 .................................... ATTGTCTATAAAGTATTAGCTGCTGACAAT 10304 36 100.0 30 .................................... TTTAAAAGATTATTTTTTACTTGTAAAGAT 10370 36 100.0 30 .................................... TGATAATGCTGCTGTTGCTCTTAATGGATT 10436 36 100.0 30 .................................... TTGGAGAGAGCAATTCTCTCACCAGTGTTT 10502 36 100.0 30 .................................... TAGATTATCCACAGCGTATTGAGCTTGTTC 10568 36 100.0 30 .................................... CGCATTAGTTAATACATCTTCAACACTTGA 10634 36 100.0 30 .................................... TATTACTGACGCCTCACCAGAACGTTTATT 10700 36 100.0 30 .................................... CTTTTGAATGATAAATAGTTACTAAGCCAG 10766 36 100.0 30 .................................... CTGTGCTAATGGATCCACATCAATATCGCT 10832 36 100.0 30 .................................... AGAAATCTTTGAATTAGCTGATTTATTGAA 10898 36 100.0 30 .................................... ACATACCACAAGTCTACTAAGATTGTTGAT 10964 36 97.2 30 ............T....................... ACATACCACAAGTCTACTAAGATTGTTGAT 11030 36 97.2 30 ............T....................... ACATACCACAAGTCTACTAAGATTGTTGAT 11096 36 97.2 31 ............T....................... GGCAAACAACATTAATCTTGAAAGCCCGCCA 11163 36 100.0 30 .................................... CTGTGCCTTGATATGTATCGAGCTCGGAAC 11229 36 100.0 30 .................................... TAATGGATTCAGTGATCAGGAAATGTGGAA 11295 36 100.0 30 .................................... TAATGGATTCAGTGATCAGGAAATGTGGAA 11361 36 100.0 30 .................................... TAATGGATTCAGTGATCAGGAAATGTGGAA 11427 36 100.0 30 .................................... TAATGGATTCAGTGATCAGGAAATGTGGAA 11493 36 100.0 30 .................................... TAATGGATTCAGTGATCAGGAAATGTGGAA 11559 36 100.0 30 .................................... CCCAACTATGACGATTTAACTGCCACTGAT 11625 36 97.2 30 ............................C....... AAAGCAGCAGATATATTGAGCAGGATACTT 11691 36 100.0 30 .................................... AAAGCAGCAGATATATTGAGCAGGATACTT 11757 36 100.0 30 .................................... TCAAAAAATTTAAATAAAGAGTTGATCCAC 11823 36 100.0 30 .................................... TTTGAGACAACTTATATTGATGGTCGAGAT 11889 36 97.2 30 ................T................... TATGAGAATAATAGGGAAACCGCGTCCTGT 11955 36 100.0 30 .................................... GGTAGCATTAGAAAACAGAAAATTAATATG 12021 36 97.2 30 ............T....................... ACTTCCACAGCAGCTGCAATTTATCCAAGA 12087 32 86.1 138 ..........................----....T. TGTATTAAATTTAATGTACAATCAACCTATTATTTAGATATTTATTGAGTTGAAACAATTTCAAAATAATAAATTGATGTTAGAATTAATACAAATGGCATTCACGTTTTAAAAATATCACTGCTTTAGTAGTATTAT 12257 36 94.4 0 ....................C..............A | ========== ====== ====== ====== ==================================== ========================================================================================================================================== ================== 34 36 98.9 33 GTTTTAGAAGTACGTCATTTTAGTTAGTTAAGAACC # Left flank : AGTTTTGATATTAACTCCACTTCTAATCTCAAATTAGTCCTTCAAAAAATAGTTTCTGATAATGAAATTATCAATCGTGATAAAATTGAAAACTTGAATAAGCAAATAAACGACTTGATATTTGATTCTATAATGGGCTACGAGGAAGTATTTGATTACGAATTATTACCTGAACTTACAAAATTACTAAAATCAAAAGATTTCAAGATAGATACTGGTAACTGGCAGAATTATTATGATAAACTTCAGTCAGTAGTTAGATTTTATGTAGAGTTTAGTAACAAGAAGTTGTTACTATTTCATGGCTTAGAACGCCTATGTAGTTTGGAACAACTTAACGAATTGAATGATTACTTGAAATCCATTGAGTTAGCCGTAGTGAGTCTCGAATCATACCCTATGTCATTGAAAAATCCCGACTTGAACAATCGAGTTTATTCAATTGATGAGGATCACGTTAGATTCGATTATTAACACTTAAAGTTAACGTTAAGTAGGTG # Right flank : ATAAAGGCTATTCAATTTAAAAATTGGATAGCCTTTTTTTTCATCCCAAATAAAAAAAGCCTAACAAAAAAATCAGTCAGGCATCTCTATCAAACAAATTACATATCAACTTTAATAATATCTTCAACATTATCATCAAAATCAATAATCATATTAGCAACTTCTTCAGGCTTTTCAATCATCCCTACATGACCTGCACCCTTCAAATCTTTCATAGTAAGATGCGGAACACGGCCAATTGTTGCTTTGGCATCTTTAACACCATCTTCGGTCAGAATCTGGTCGTCATCAGAGAAGATAGCCAATGTAGCAAGAGCTGTAGCACGAAGACGCTTATTCAGAGCTTTTTCTTCCAAGTACGTATTGGCCAACTGGCTCATCTTTTTAGCAGCCTTGTGATCCACTGCATTGGCGGCATCATCAATTACATTGGGATTCTTCAATTTTGAAGTATCGAATCCTTTAGCAAAATACAAACTGGACTTAACTGGCGATTTTGC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTACGTCATTTTAGTTAGTTAAGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //