Array 1 125484-124296 **** Predicted by CRISPRDetect 2.4 *** >NZ_ADIS01000024.1 Escherichia coli B921 supercont1.24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 125483 29 100.0 32 ............................. TACTAAAAGTCTGGTTCACGAATATCAAAAGG 125422 29 100.0 32 ............................. ACGGCTTCATGTTCTTGGTGATGGGGTTCACC 125361 29 100.0 32 ............................. GCTCATTTCAAATGGTCAGGTCCGGTGGTTTT 125300 29 96.6 32 ............................C TGATCACATCATGTTTATTCGCGGTCGTATTG 125239 29 100.0 32 ............................. TACTGGAAAAAGCTGGCGACGGTGAGCGCAGC 125178 29 100.0 32 ............................. GGCACGGAATTGTTATGCTGTTCCCCTGACCG 125117 29 100.0 32 ............................. ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG 125056 29 100.0 32 ............................. GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA 124995 29 100.0 32 ............................. CGACGTTTTCTAATATCACCCAGCAATCAATT 124934 29 100.0 32 ............................. ATTTCATCAAAGCATTAAGGGATGGAATAAAG 124873 29 100.0 32 ............................. TCATGAATATGGGGAAAACGAACAATCTGTTT 124812 29 100.0 32 ............................. AGGACGAAACGACCGGAAAACTGGCGACGGGC 124751 29 96.6 32 ..........................T.. CGTCCGCGGCTGCAACTGATGCCGGGGCTTAT 124690 29 100.0 32 ............................. AACCTTGTCGGGTCGCCCGTGCGTCATGATGA 124629 29 100.0 32 ............................. AGTTCCCACAAACCTGGGTGCATCTCGCGTTC 124568 29 100.0 32 ............................. ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA 124507 29 100.0 32 ............................. CCAGCCGAAACAACGCCAGCAAAATCGACCGC 124446 29 100.0 32 ............................. CCAGGACAGGCCGTGACGGTTGCCATTGAGTC 124385 29 100.0 32 ............................. TTTTTGTTCTCTTCAAAACGCCGAACAACCAA 124324 29 93.1 0 ............T.....A.......... | ========== ====== ====== ====== ============================= ================================ ================== 20 29 99.3 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGTGCTTGCTGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCCGTTTCTCTGGGAGATGCCGGACATCGGAGTAGCTGAGATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAATCGGGATTTGAGTTCCAGACATTTGGGGTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTATCTTTTTTACCTGTTTGAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAGA # Right flank : GACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAACTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCTGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 153653-152159 **** Predicted by CRISPRDetect 2.4 *** >NZ_ADIS01000024.1 Escherichia coli B921 supercont1.24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 153652 29 100.0 32 ............................. AGCACAAATATCATCGCTCAAACCACTTACGG 153591 29 100.0 32 ............................. CCTCGCTGTAAATTCCAAAAACGATCTCTATA 153530 29 100.0 32 ............................. AAAATAAATGATAATCAGACGGTTAGCAACGT 153469 29 100.0 32 ............................. ACAGTACCGGAGTTTGACGGTGCCAACGGCGG 153408 29 100.0 32 ............................. TTCGTTTTTCGCAGCATTAACTTTTTGCCGCG 153347 29 100.0 32 ............................. TATTCGTAGGGTTTGCGCCGGAAATAGGCGCT 153286 29 96.6 32 ............................T TGATCCGCGACCGCCAGATGGCGCAGCCTGTC 153225 29 100.0 32 ............................. GTGCGCCAGCTATAAAAAACTCACCATCAACA 153164 29 100.0 32 ............................. CGCCACCAGCGATAGAGCCGCAAACAGAGCCG 153103 29 100.0 32 ............................. ATCCCCTGCGTCCTCTTTTGAATAATCGCGGC 153042 29 96.6 32 ............................C AGGTCCTCGTCAGATACAGTAGTCACAACACC 152981 29 100.0 32 ............................. CACTGACAGTGAAGCTGAATTACAGGCAGAGG 152920 29 100.0 32 ............................. TGGCTGTGGCTTTGTTTTTTGCTCTGATATAT 152859 29 100.0 32 ............................. GCGTCCGTCAAAGAGGAAGCCAAAGCCATGCA 152798 29 100.0 32 ............................. TCGGTTTGCGCGTATTGTTGTTCGGGGTCTAT 152737 29 100.0 33 ............................. TAGGTAAATCACAGCTATTTGATAAGGGCGTGT 152675 29 100.0 32 ............................. CAGTTGAAGCGCTTTAAAAAATTCTGGACGGC 152614 29 100.0 32 ............................. AGATCGACATGAGCCGCCGCGCGACGAATAAC 152553 29 100.0 32 ............................. TACCGATAATCGGTACAAGATAGTATTTACAT 152492 29 96.6 32 ............................T GTGTTTGCGGCATTAACGCTCACCAGCATTTC 152431 29 100.0 32 ............................. ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA 152370 29 100.0 32 ............................. AGCAGATACACGGCTTTGTATTCCGTGCGCCC 152309 29 100.0 32 ............................. AATAGCAATAGTCCATAGATTTGCGAAAACAG 152248 29 100.0 32 ............................. GAGCCTGACGAGACTACTGAGGCCGTTCTGTC 152187 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================= ================== 25 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //