Array 1 68203-70611 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ958215.1 Cutibacterium avidum strain MJR7694 Scaffold4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 68203 29 100.0 32 ............................. TCAGTGAATTACGATTTGCTGATGATGTCTAA 68264 29 100.0 32 ............................. GCCGTGCAAACTAGTCTCTACGGTCACCTGCC 68325 29 96.6 32 ............................T CCCGAGGACGTTCATAAGGCCCCGATCACGAA 68386 29 96.6 32 ............................T ACGATTAACAAGGCCGTCCATAAACTCGTTCA 68447 29 96.6 32 ............................T AGCTCCAATTGTTGTAGAATAATCGCCCTTAG 68508 29 100.0 32 ............................. CCTGATATTGACCCCGGCGGTGATCCAGGAGC 68569 29 100.0 32 ............................. TGCAAAAGTATAAATGTGATAAAATTAACAGC 68630 29 100.0 32 ............................. AGCGGTGGCACACACCGGGAAGGCACGTGCGT 68691 29 96.6 32 ............................C ATCACTGCTGGAACGAAACGGCTTGCGGAGAT 68752 29 96.6 32 ............................T CGTAAACGCTTCACCGCCCACCTGTCCGCTCG 68813 29 96.6 32 ............................T CAATTATATGAGAGTGAGCTCATTAAATATGA 68874 29 100.0 32 ............................. CGCTTCCAATCAAAGAAGGTATTGAAGAAATA 68935 29 96.6 32 ............................T CGTAATTCACAGACTTCAATTTAGTATTCTCA 68996 29 96.6 32 ............................T CGTGGCCACATGGATAGGCCCGGCGCGTAAAA 69057 29 96.6 32 ............................T AACGCCGCCTACAGCGTTAATTCCGGTGTGCA 69118 29 100.0 32 ............................. CGGGGTGCCCCCGGACCGCAGGGGCCGCCCGG 69179 29 100.0 32 ............................. ATTTTGCCGCCTGCTCATACGAAGGCGGCAGG 69240 29 96.6 32 ............................T TCGTTGAGGACGTTTTCGTTTCACTCGACGCA 69301 29 100.0 32 ............................. GGCATTGGCGACTTCCCGATGTGGAAGTTCAC 69362 29 100.0 32 ............................. ACAAGACCGCGACGTCCATTGAGGCTGGCGGT 69423 29 100.0 32 ............................. TCGGTCAACTATGATCTTTTGATGATGTCCAA 69484 29 100.0 32 ............................. GCGCTTCCTGCCAGAAGCTAGACGCCGCACCG 69545 29 96.6 32 ............................T GCGGACGCCAGATCCATTCCCACAGGCGCAGT 69606 29 100.0 32 ............................. TGGGAGATGCGGATGAGCATGTCCGACGTCAT 69667 29 96.6 32 ............................T TTCAGTGGTCATGTCGAATGTGTCATTACCCA 69728 29 96.6 32 ............................A CCACCCACCCAAACAGAGTTATCGACCCCGAG 69789 29 96.6 32 ............................T CACACGTCGGCTCACCATACGGCATATCACAA 69850 29 100.0 32 ............................. ATCTGGAACAGTCGGTGTGGGGTACGGAGTTG 69911 29 96.6 32 ............................T AGTGCGATCAATAGAGGCAAGTTTCCCCGAAA 69972 29 96.6 32 ............................T CGGCTCGCCCTCCACAGGAATAGCCTTGGATT 70033 29 96.6 32 ............................T ATTAGGGGCACTAAATACGATCCTACACGTGG 70094 29 96.6 32 ............................T CCCAGGGCGTGAACCTCCGCAGTTTTGCACGG 70155 29 96.6 33 ............................A TGCCCCTCAGACGCTCTCCCTGCTGCCTAGGAG 70217 29 96.6 32 ............................T GAACCGCGACGACGTTCTGGAGATCATCCGCG 70278 29 100.0 32 ............................. CTACACAAGTGGTTTACCCCTGCGTCCGGCTC 70339 29 100.0 32 ............................. ACGCTTGGGCTGTCATCCCCTCCGCCGCGTCC 70400 29 100.0 32 ............................. GGCGTTTGCCAGATAATGTTGAACGTGTTTCA 70461 29 100.0 32 ............................. ATAGATCGATGCCTATGTAGCGGTGCATCGAT 70522 29 100.0 32 ............................. AGGCGGTTGCGTCCGGTGGAGATGCTCTTGTC 70583 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 40 29 98.3 32 GTCTTCCCCGCCTACGCGGGGGTGAGCCG # Left flank : GACGCCCCCGGAGATCCCGATGACGGATACGGGTGGGATGTTGTCGACCTGTGGGACGACCGCACTGGCACGGTCGCCGGCGGAAGATCGTGGGCATAGCCATGGTCGTGCTCGTCCTCACCGCCTGTCCCGCGGGACTGCGTGGCCACCTCACGAGGTGGTTGCTCGAGATCAGCCCTGGGGTGTTCGTCGGGCATCTGCCTGCACGGATCAGGGATGCCCTGTGGAGCCGAGTCGTTGAAATGTGCCACGACGGGCGGGCGATCCTCGTGTACTCGATGCGCGGCGAGCAGCATTTCGAGTTCCGCGTGCATCGACATGACTGGGACGTCGTCGACTTCGACGGGCTGAAACTCATGCAGAGGCCAAACAATAGGGCACACAACTCGACACTGCGGCCGGGATGGAGCTCGGCTGCGCGGCGACGTAGGACGGCCAAGCGCTAGATCGAGTACACTTGTATCTGGGCAAAGCTCCTGCATCAACCGTAGTCGGCTGGT # Right flank : GGAGGTCAGCATGGCTGACCTTGTGATCCAGGCGTTGCAGTTGGCGACAGCGGTCGTCAACCTCGCAGCCGCCGTGATTGCGGTGCGCACGCTCCGCAAAGAAAGCCGCCCCCGAGGGACAACTCGGAGGCGGCGAGGCGGCAAACGCCGATAACACAAAAGGGGGACCCGGTTCCACAGAGGGGCCGGGTCCCCTCCTTCCACGAAGTATACCTGTCTGCGCGGGCCAGGAGAAGGGGTCGCCGGTACGCCGATGAAGCGCTTAGGTCGTCTTCCCCGCCTACGCGGGGGTAAGCCGGGGTTTCTCACTCAGATGAGGAGGGCGAGATGAGTGAGTTTGTTGCCGACAATGGTGTTGGAGTGACCGACGAGATGGCTCGCCAGTGGGCGAGTGAGGCTGAGTCGGGTTTTGAGGGGTTGCAGGTCGAGCCGTTCGAGGGTCGAGCTTGGGAGGACGTGGAGACTGACCCCCTGGAGCCTCGCACGATCCGGGTGAGTGC # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCCTACGCGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCGCCTATGCGGGGGTGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //