Array 1 1094982-1099770 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFSA01000001.1 Actinomyces denticolens strain NCTC11490, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1094982 28 100.0 33 ............................ GGCCCGCGCTATCAGCGCCGAGCTCCGCTCCAA 1095043 28 100.0 33 ............................ CGGGCCCCGCGACCTCTCAGTCGTGGGGCCCGT 1095104 28 100.0 33 ............................ GACCCTAGGGGCGGATCTGGCGTGGGTAGAGAT 1095165 28 100.0 33 ............................ CTGTTACCGCGATCGAGGCCGCCCGTCGCTCGG 1095226 28 100.0 33 ............................ GGTCCTCAAATCGTCGGGAATCAGACAGATACA 1095287 28 100.0 33 ............................ CGCAATCACATCGCCGGGCTTGGTCATCAGGTA 1095348 28 100.0 33 ............................ TACGGCTCGATTCTCATCACCCGATGAATAACT 1095409 28 100.0 33 ............................ CGTCCGCCGAGGCTCCAAGCGCTTCGAGGACAA 1095470 28 100.0 33 ............................ CTCACACCCCCGTGCCGTAATCCCGGTCACAGC 1095531 28 100.0 33 ............................ TGAATGTCATTTGCATTACCCATTCGAGTAGGG 1095592 28 100.0 33 ............................ GGCGACGCGACCATCACGGGGCGCACGCGTCAT 1095653 28 100.0 33 ............................ GGGGGGCGCTGAGACGGACGTCACTCCGGGCCG 1095714 28 100.0 33 ............................ CATGGGGCGTCACTGCCGCCGTCATCTTGGTTC 1095775 28 100.0 34 ............................ ACCCCCCCGCCTCCCTCGACGCCGGGGCGCTGGA 1095837 28 100.0 33 ............................ GAATCTTACTGTCCATTGCTCCTCACTCTCCCC 1095898 28 100.0 33 ............................ CCCGACGAACAACTCAACAGAGAGGAGGCCCAT 1095959 28 100.0 33 ............................ CGACGACTCGGCGCTCCGGGCCGGCCTCGGCAT 1096020 28 100.0 33 ............................ GCACCACCGAACCGAAACTCGCCACCCGCCCCG 1096081 28 100.0 33 ............................ CATCCCCACCAGCAGAACGGAGCCCCCCTCATG 1096142 28 100.0 33 ............................ CTGCGGCGCCTCCAATGGGTCGACGACTATCTG 1096203 28 100.0 33 ............................ TGCGGGCGGCGACCGCATCGAGATCTCCTCGTC 1096264 28 100.0 33 ............................ CAAGAGCGCCTACCTCGCCGTCGCGCGAGCCAA 1096325 28 100.0 33 ............................ GGTCCGACCTGCCCGACGATGTTCGGGAGCATC 1096386 28 100.0 33 ............................ TTGCCGGAAAGGCTGTTCTCATACCGCAGGATA 1096447 28 100.0 33 ............................ CACCACGCCAGAAAGTCCTCGTGAACATCAAGA 1096508 28 100.0 33 ............................ GATCGGGCAGACGTCGGAGAAAAGCCTCCGCAA 1096569 28 100.0 33 ............................ CACGGCGACGATCAACGGCGGGTCCATGCGTGC 1096630 28 100.0 33 ............................ CATCGTCGTTGGTGAGCCAGCCGCGTGCGCCCA 1096691 28 100.0 33 ............................ ATCGTATGGTGCCAAGAAGTTGGCGATCCGGAA 1096752 28 100.0 33 ............................ GGTCGACGGGGCCGGGCAGGGGAGAGGTCGAGC 1096813 28 100.0 33 ............................ GATCGCCCCAAAGAGTAAGGAGAAAGCGCTTGG 1096874 28 100.0 34 ............................ CCGGGGGGGGATTCTGGGAACGCGGAGAACGAAA 1096936 28 100.0 33 ............................ CCGCTCCCTCATGCGGACCACCGCCCTGCAGCC 1096997 28 100.0 33 ............................ CGGCGTGATGTTCGTGATGCGCGATACGGGCGG 1097058 28 100.0 33 ............................ GGACGCCCGGGGTCTATCAGGCGCCGTAATCGA 1097119 28 100.0 33 ............................ CATTAGCGGGTATTTTCAGTTGACCCGTATTCG 1097180 28 100.0 33 ............................ TTCGGGTCGCCTCACGAATTGGAGGTCTCTTGC 1097241 28 100.0 33 ............................ TGAAACTCGGCAGGCCCGTACCGTTGTATCGCT 1097302 28 100.0 33 ............................ CAGGCGGTCCACCCGCCCCAGGGCGGCGATCTG 1097363 28 100.0 33 ............................ CAGCCAGGCGCCTGACCACCCGCCACGTCGTGC 1097424 28 100.0 33 ............................ CCACTCGGGGTCCCAGACGCCGACCTTCTCAAG 1097485 28 100.0 33 ............................ CCTGGATATCAAAGTCCGGGGGCACGGCATCAC 1097546 28 100.0 33 ............................ GGAGACACCATGAACCGCGTCATCCGAGAATCC 1097607 28 100.0 33 ............................ ATGGGCGGCACAAAAGACGTGACAATCAACCGC 1097668 28 100.0 33 ............................ GTCGAAGACCGGGGAGGTTCGCATCAAGGTCAC 1097729 28 100.0 33 ............................ CCGCTCCGCAGTCACTACAACTTGCAGGATGTC 1097790 28 100.0 33 ............................ CCGCGTATACCGGTAACCGCATATCAACATACA 1097851 28 100.0 33 ............................ TTCTGTGCGCTGTCATCCCCGCTATCGCAGAAG 1097912 28 100.0 34 ............................ CCCCCCCGAAGAGACTGCGGTACTTCTCTGACAT 1097974 28 100.0 33 ............................ GAGCGCGAAGCAGTCCGCAGAGGAGTCCGTGGA 1098035 28 100.0 33 ............................ TCGAGCGAGCTCACGCTCGTGGTCGAGGCCGGG 1098096 28 100.0 33 ............................ CTCCTCGCCGCCCAACTCCCCCAAGCCCTCCAG 1098157 28 100.0 33 ............................ CTGGGTCCGGCGCGCCGTCGACGATGCACGCCG 1098218 28 100.0 33 ............................ GACCGACGTGCGCGGCCTCTCCAGCAGCATCGT 1098279 28 100.0 33 ............................ TGGCCACATTATTCCAAAAGTACGTCCATTTCA 1098340 28 100.0 33 ............................ GGGTCGCCATGCAATCAAGGTAAGTGAGTTTCA 1098401 28 100.0 33 ............................ GGGCTCGTCGAAGGGTCAGGGGTCGTCGTCGCA 1098462 28 100.0 33 ............................ CGCCAGGCAACCGATCAGGAGGCTCATCATGAG 1098523 28 96.4 33 ............C............... TGTAGAACGCACTGCGCGTCATCATCTCCAATC 1098584 28 100.0 33 ............................ CAGGGGCCGCATATTGCCCGTGTAGAAAACGCC 1098645 28 100.0 33 ............................ TCTAGTCCGCTACTGCGGAGAGAATCGTGGATT 1098706 28 100.0 33 ............................ TCTAGTCCGCTACTGCGGAGAGAATCGTGGATT 1098767 28 100.0 33 ............................ CTGCGGCAACCCCACGGACCTGGAAGCAATGAC 1098828 28 100.0 33 ............................ AGGCGAACCCGACCCACGCGACCTCGTCGAGCG 1098889 28 100.0 33 ............................ GGAGGGCATGATGAGCGACGTCATCACAGGGCG 1098950 28 100.0 33 ............................ CAGTGGGGCAGACCACACCTCAGACGTCTGATG 1099011 28 100.0 33 ............................ CGACGTCCTGGCCGCCGTGGCCACGGGCCAGGC 1099072 28 100.0 33 ............................ CGCGCCGGCGATGACGAAGGTGTCGGTCCCATA 1099133 28 100.0 33 ............................ CGCTTCCCACCGTGCGCCTCACCGTTGAAAACC 1099194 28 100.0 33 ............................ TGCTGCGAAGATCCTCTACCGCACCCGAATGGA 1099255 28 100.0 33 ............................ TCTATGGGACCCTCCGGGCAATTAATCCGGCCA 1099316 28 100.0 33 ............................ CCTATGCCGGAAGCCCCTGAGTTCAACCTCGAC 1099377 28 100.0 33 ............................ CTCGTAGTGGATGAAATAGATTCCTGGCGACCC 1099438 28 100.0 33 ............................ CGAAGTCTGCCGTGCCCCGGATAGGACCGAGCC 1099499 28 100.0 33 ............................ TACGTCCCCCTCCAAACCGCCTTTCATCTGGCC 1099560 28 100.0 33 ............................ CCGCCCCGTGCCGTGAGAGGCACGGGGCGGCTC 1099621 28 100.0 33 ............................ GACCTACCGCAGCACCCCGGCCATCCTGACCAT 1099682 28 100.0 33 ............................ CGAGGACGGGATGAAGTTCAGCCCTGACGACTC 1099743 28 96.4 0 ................T........... | ========== ====== ====== ====== ============================ ================================== ================== 79 28 99.9 33 GTGCACCCCGCGTATGCGGGGATGATCC # Left flank : CGTCTCCGGCGGAGCGAACTACGCCGCGATCGAAGCAGAGGAGGCAGGTAGATGGTAGTCCTGGTCCTCACCGCCGCTCCCGCACAATTGCGCGGCTCGCTCACGCGTTGGCTGATGGAGGTCTCTCCCGGAGTGTTCGTCGGGCATCTCGCCGCCCGGGTGCGCGAGCAACTATGGGATCTGGTCAGGGCTTATATCGGGGATGGCCGCGCGCTCCTTATTTGGTCCACGAGGTCGGAGCAACATTTCTCTGTGGCCTCGCTCGGCCACGACCGGGAACCTGTGGACATCGAGGGCTGCCTGGTGATGCGGACTCCGTATCGGGCGATCGAAGGGTCGCAGGCGATCCCCGGGGTTGTGAGGCCGGCGAAGGAGTCCTGGTCCGTCGCCGCTCGTCGACGCCGCTACAGGAACTCGGCGGAACGGGCTCTAGGTAGGGAGTGAAGGCAGAAGGTTTCAGATAGGTTACGATGCTGTTGGGATCCCAAGGATCACCAAGT # Right flank : CCGTCGGCAACCGTATCAAGAAGCTCCTCACCCCATACATCTCGCGTATGAAGAGATACGGGGAAGATCCCTGACCGACGCGAGCGCTACCGATGCCGACGTCGCATATCTTGTACATACGGAGATGACCCCAACGACTTATCGAAGCCGGCCTTATCGATGGCACACCTCTCGCATATGCGAAGACAACCTGCGTCACAATGAGTTATGGAACCAGCCCCACAGACACGCTCCAGACCAATAGGGGAATCCCATAAGTCAATCTATCCTTGATTGCTTAATGAGATTCCAGACAAGCCTAGTGGTCCACATAATAAACTATCCATATCAAAGAGTCATTAATTCATATCTACACATCAAGGAAATAGCACACTATAACATATCGTCGAAGCCATTCAATCCAGATAAATGAAGATCGATGACAAAAAGATAAACCATAAGCAGCGTACCACCAAAGGATATATCTATCGATCTCCATGACCTGTATGTGGAGCAAGGAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACCCCGCGTATGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGAATGCGGGGATGATCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //