Array 1 46153-44063 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHQE01000021.1 Bifidobacterium longum subsp. longum strain MCC10023 contig0021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 46152 36 100.0 28 .................................... AGACGGAAGAGAAGGTGACGCCCGAGAT 46088 36 100.0 28 .................................... TGCGCTATCGCGGTCATCAGCGCCGCGT 46024 36 100.0 28 .................................... TCCACCGACGTGATGGACAACTACACGA 45960 36 100.0 28 .................................... ATGTTCCATGACACTGTTCCTTCGGCAT 45896 36 100.0 28 .................................... ACCATGTAAGGAGCCGTTTCGATGGTGA 45832 36 100.0 28 .................................... TAAATCAAGGCATGTCGAAATCTAATAA 45768 36 100.0 28 .................................... CTTGTTCCGTACACTTGGGTGATGGTGA 45704 36 100.0 29 .................................... ATATCAGTTGTACCGCTGGCGCTGGAATC 45639 36 100.0 28 .................................... ATGACAGTCTGAGCGAACTCATCACCCT 45575 36 100.0 28 .................................... ATGCCTACGTGGAGTCTAATTTTTCATG 45511 36 100.0 28 .................................... GAGGATTCGGGCAAGATCATCCAGTTCG 45447 36 100.0 28 .................................... CCACGTATGTATAATATAACCCGTGTGA 45383 36 100.0 28 .................................... GAGATGCGCGGCGGCGTCAAGCTGGACA 45319 36 100.0 28 .................................... TCCGACACGCTCACTATCCGCGAAACCT 45255 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 45190 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 45126 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 45062 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 44998 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 44934 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 44870 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 44806 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 44742 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 44678 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 44613 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 44548 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 44483 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 44419 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 44354 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 44290 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 44226 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 44162 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 44098 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 33 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : GCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCTTTAAACCTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //