Array 1 278662-278083 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSST010000012.1 Streptomyces olivaceus strain FXJ2.409 Scaffold10_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 278661 29 96.6 32 ............................G ATCGGCGGATAGATCCGGTCGGTGGGGATGAA 278600 29 100.0 32 ............................. GTCCGCTTCGGCGCGCGTGGCGTGGCGCGTAG 278539 29 100.0 32 ............................. CGGTTCGAGCGACAGACCGGCATCACGCTGGG 278478 29 100.0 32 ............................. GAGCCATCGACGACGGGTACGAGATGGCCGCC 278417 29 100.0 33 ............................. ACCTCCCGCCGCTCCAGGTAGCCGTGCTCGCCC 278355 28 96.6 32 .....................-....... ACGAACCCGGCGACGTCGATCCCCGCCATCGG 278295 29 100.0 32 ............................. ACCCCACAGTCCCCGTACTGCTCGGTGGTCGT 278234 29 100.0 32 ............................. GACAGCAGCCGGCCGGTGCGGCCGTCGTACAG 278173 29 100.0 32 ............................. GGGTCCGTGACCATCGCGGAGAACGGCGTCAG 278112 29 89.7 0 .............T..........AC... | C [278090] ========== ====== ====== ====== ============================= ================================= ================== 10 29 98.3 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : ACACATGTTCACCCGACGACCGCGACCGGGCCGAGTGGCAGCCCGGCAACCCCGCCTGGGGCCACTGCGACATCACGGCGTTGATCGTCAACGACATCTTCGGCGGCGATCGCGTGGTCGGCGAGGTGTACCTCAACGGTGCTCAGCGCAACTTCCACTGGTGGAACCGGCTGCCCAATGGCATCGAGCTCGACCTGACGCGCGAACAGTTCCGCCTCGGACAAACCGTCACGGCCGCCCGTGTCGTCGAACGCCCGCCCGGCCCGCTGCCCCGTCGCTATGAGGAGTACCTCCTGCTCCGCGAGCGCATGGCCGAACACCTCAGCCCGCTTCCGGAGCCTGCGTGAGGGAGAGCCATGCGGCAGTCGGAATCCGCCGGAGCTGTGGTCGACCAACTCTGCGTACGTTCGGACCGATACCGCGGGGTGCCCTATTTGCCGGAATCTTCGAAAGTCACTGAAAACACGCCTCTGCGGCCATAAACTCGCAGGTCAAACAGT # Right flank : TGCGGAGATCGGCTTCAGGGTCGCTGGGTCAGTTCACTGGAGCTTCTCGCGCGTCTGCGCGCCGCTGGTGGGCGGCGCGCAGACGGGTGGGGTGTGCTCGGTGCGGGGGCGGTCAGGCCCAGCAGCCGTTGACGGTGGCGGCGAGGCCGTCCATGGCGTCCTTGATGTCCGTCGGGTCGGCCGTCGAGTTGTTCTCGATGAAGGAGAAGATCCGCCAGTCGCCGTCCTCGGTCTTCGTGACACCGCTGAGGGCGATGGCGCCGGTGAGGGTGCCGGTCTTGGCCTGGACCTTGCCGACGGCGCACTCGGAGTTGGGGTCGTCGAAGCGGCCCCACTCCGGGCCGAGGCTCGCCCCGGCCTCGCCGGCGACCGGCAGGCCCTCCAGGATCGAGCTGAGGGCGGGGGACTCGGTGATCGAGTCGAGGAGCTGCGCGAGGGTGGCGGCCGGGATGCGGTCGTCGCGGGAGAGGCCGCTGCCGTCGTGCATCTCGAAGTTGTCG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 289916-289459 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSST010000012.1 Streptomyces olivaceus strain FXJ2.409 Scaffold10_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 289915 29 100.0 32 ............................. ATCACCACGCGGTTCACGGTGGTCGGTTCCGT 289854 29 100.0 32 ............................. ACCCCAGCCACATCGGCCGGGGGCTCCTTGGT 289793 29 100.0 32 ............................. TGGATCGGGACCTGGAGGACCCAGGAGAACGT 289732 29 96.6 32 .........................C... GACCAGCTCAACGCCCGATGCTGGGTCGACGG 289671 29 93.1 32 ...........A.....A........... GTGTACGTGCACGGGTTGCGGAACTGGTACTC 289610 29 96.6 32 .............G............... TTCGTGGAGTCGTGGATCACGCCGAGGGTGAC 289549 29 75.9 33 ........T..A..A..........GTTT GGCGGGTGCGCAGGTAGAGGCGGTCAAGCGGCG 289487 29 69.0 0 ..A..G.G....T.A.T..CA..C..... | ========== ====== ====== ====== ============================= ================================= ================== 8 29 91.4 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : CTCCGGTCGGGAGAACGAGGAGGAAGCCTGGGGCAGGTTCCGCAAAATGCTCCAGCCGAACAAGCTCGACCGCACCGAGGTGCCGTTCGTCAAGATGCGCTACGACAACACCCGCACACAGAGCATGAGCAAGGGCGACGCCCGCGGCTTCGCGCCTCTGGACACTCTCGTGCGGGAACTGGGGCTGCTCGACGGTGCTCCCGGCAGCTTCGTCGAGTGGGAGAACCGGCACGGCGCCGTCTGGCGGGCGGACAGCAACAGCGACGGCCTCGAGCTGGCACACGACGGCACGCGGGAAACGGTGGACACCGGCCAACTGCAGGCTACGGCCCGCACCAGCGTCCAATGAGCCCGGTCCCGTGCCCATTGCCCACAGAGCCTGCGTAGACGCGCAAGGTGAGTCCGACTTGCATCACATGCTACTCATGCCCCATTTGCCGGATCTTGTAAAAGTCACTGAAAACGTGCCCCTGAGCCCATAAACTCCCAGGTCGGACAGT # Right flank : TGCGCGGTGGCTGGCTTGGATGGTGTTTCCACCGCACCGGTCGAGACGTTGTGGACCGGATCAATAGGTGAGCGTCATCCGGGTTTCCGGCTTGCTGATGGTGTGGCCTGGGGCGTCCCCGGTGTCGGAGGGCGTGATGGTCAGTCGTGGTACTGCCAGGCGGGCGGCGCCCCACGCGTCGATGTGGGCGACGAGGTCTCGGGCCAGTTCCTCGCCGCGTTGTCCGTATGCGGTCGCGCCGAGTCGGAACGGGCGTTGCGGGTCGGCGTCTTCGCGGGTCACGGTCAGGTAGGCGAGGGAGGCGTCGTCGATCAGGGCGGGGGTGCGGGCAGGTGTGGCGGGCCTGCGGATCAGGGCCTGCTCCATGGCCTCGGGGGTGGCTTCGAGGCGGCATACGCGGTCGTCGTGGGCGCTGGCGCGCAGCCATACTCCGTCGAAGGACTCCTCGCCGCCGATCCGCTGGGCGGACAGGACCTCGCGGGCGGGGTTGTCCGCTCGCA # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 191581-188562 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSST010000015.1 Streptomyces olivaceus strain FXJ2.409 Scaffold13_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 191580 28 100.0 33 ............................ CCCTTGAGCATCGGCATTGAGGACGAGGACCTG 191519 28 100.0 33 ............................ CTCACCCGTCCCGTTGCGGTAGGCCGTGGCAAC 191458 28 100.0 33 ............................ GATCATCAGCGGGCCGATGGGTGCCGGCACCAC 191397 28 100.0 33 ............................ CCGTGACAGGGGGAGGGGGTGTCGGCGCCGCGG 191336 28 100.0 33 ............................ CTGACGGCGGTCGCCCCGAACACGGTCCGGGCG 191275 28 100.0 33 ............................ CGTCGCCGCGACCCGTTGCGCCCCGCCGGGGCC 191214 28 100.0 33 ............................ CCCGTCCGCCCAGATCACCGCCGTCGAATACGA 191153 28 100.0 33 ............................ GTCCACCACTGCCTCCCCCAGGTCGTTTCCCCC 191092 28 100.0 33 ............................ GCCGCAGCCGCGTTCGAACCACGCGGCGACCGA 191031 28 100.0 33 ............................ CCCAACCCGGTCCAGTGCCTGTTCTGCGGCGGT 190970 28 100.0 33 ............................ CATCAACCCCGGCGACGTCACCGCCGGCGGCGG 190909 28 100.0 33 ............................ CTCGCCGAACAAGCTGGACAAGGGCAGCACGAA 190848 28 100.0 33 ............................ TCAGGCCCTCGACGCCATGACAGGCGTCCAGTC 190787 28 100.0 33 ............................ GCGGAAGGCCACTCCGGCGTCCGAGTCCACAAA 190726 28 100.0 33 ............................ CCACACCAGCCACTGGTGGGTCGGGGGATCCCT 190665 28 100.0 33 ............................ GGTGATTGAGTACCTCCGCCAGGACGAGGACGA 190604 28 100.0 33 ............................ CTGTCGGCGTACGCCTTCCCTCCGATGCCGGCG 190543 28 100.0 33 ............................ GTGGGACATCCTCGACCCGATGGCCGAAGCCAT 190482 28 100.0 33 ............................ GTCGGTGGTCCGCTTCAGCCCGTCGGCCTTCGG 190421 28 100.0 33 ............................ CCCCCACCCCGGCCGGACGGGCGCACCGGTACT 190360 28 100.0 33 ............................ TCGTGAATTACCCCCAGGTTCACCTCCTCGCCG 190299 28 100.0 33 ............................ CTGACAGACCGCCGTCTCGCACTCGGCCCCGTC 190238 28 100.0 33 ............................ CCATGAACGTCGGCGACCATAGCCGCAGATTTG 190177 28 100.0 33 ............................ CGGCCTGCCGACGGTCGAGGAGCGCGTGGGTCT 190116 28 100.0 33 ............................ GCCCGGCCTCGCTGAGGGCGTCGGCCGGGCTTC 190055 28 100.0 33 ............................ TGCGGTCACCGACCGTCCGGCGGGCGTCGAGGA 189994 28 100.0 33 ............................ CGCGCCCCGCTCCGGGGAGTCGTGGGAGGACGT 189933 28 100.0 33 ............................ CAGAATCCCTTGCTCCTGCCGACGCTTACCTCG 189872 28 100.0 33 ............................ CTGCACGGTGCAGGCCGGAACCAACGTCACCGT 189811 28 100.0 33 ............................ TCCGTACGTGGTGAGCGCGGAAGTCCCGTGCGC 189750 28 100.0 33 ............................ GGCACGGCCGCAGTCCAGGCGGCCCTGCGTAAC 189689 28 100.0 33 ............................ GTTCCAGGACCATTTCATCAACGGTGACACGGC 189628 28 100.0 33 ............................ TCAGCGCCACCGGTCGTGGCGCCGCCAGCTGGC 189567 28 100.0 33 ............................ CGCCCTACCCCACGCCCGCATCACCACCCAAGG 189506 28 100.0 33 ............................ GCGCCGCACCGCGCTGCCCGTCCTCGCGGACGT 189445 28 100.0 33 ............................ CGCGGCCACGAACTCCGCACCGCCCGCAACTTC 189384 28 96.4 33 .........A.................. ATGACCCCCGCCTCGACCATTAGGTTGCGCAGG 189323 28 100.0 33 ............................ CGCGTACAGGTCCTTGATCCACTCGGCTTCCGA 189262 28 100.0 33 ............................ GACGCCGGACTGTCGGTCGGCACGATCAGGAAG 189201 28 100.0 33 ............................ CTGGCCGCCCGCGCCCGGCTGCCCTGAGGCGAC G [189179] 189139 28 100.0 33 ............................ GTTGCTCGGGGCGGCCGCCGACCGCGGTACCGG 189078 28 100.0 33 ............................ CGGGCCGGACGAGAGGACCAGGGCGGCCTGGTC 189017 28 100.0 33 ............................ TCCGCATCCAGGCGTTCCTTGCCGAGGTACGTC 188956 28 100.0 33 ............................ GGGCAGCACCCTGACGCTGCCGCTGACCGAAGC 188895 28 100.0 33 ............................ CTTGCTCTCCCCCCGCGCGATCAGCAGCCCGTC 188834 28 100.0 33 ............................ TGCCGGCGTCGGCCACACCGCGGGCACCCTCGG 188773 28 96.4 33 .................A.......... TGGAGTTGTGGGACTACCGGATACGACTCGTAT 188712 28 96.4 33 .....................A...... GACCGTCACGGTGCTGAGCATCGCGTACGCCGG 188651 28 96.4 33 ...T........................ CGAGGACCCCCTATACCTGCGGGCCATCGCCCC 188590 28 75.0 0 ...........G.........ACGACC. | C [188568] ========== ====== ====== ====== ============================ ================================= ================== 50 28 99.2 33 GTCGTCCCCGCACCCGCGGGGGTAGTTC # Left flank : CCCCCATGCGCCCCAACGGCAGCCCCGCCGCCAGCACCGGTGCGGCCTCGGCCGCGTCCATGGCCTGGAACGCCGGGCATGCCTTGCCGCAGTCGTGGATGCCACACACCCACATGAACCAGAGCCGCCCCCGGCCGCCGCTGACCTCGTCCAACCGCCGCCGGAACGCGGGCGCCACGTACCGGTCCCACATCACGCCGGCCACGGCAGCGGTGTCCAGCAGGTGCCCCAGCAGAAGATGCGTTCGACCGTCATTGCGTGCGGCAGACTTCCCCCACAACCGCGACACCCGCTGGACGACCTCGTCGTCCAACTCCATCGCCCGCATCAACGCAACGACCGACCGCTCGTCCTCCACGCCCCGCTCCCTCCCCTGAACCGAGCCGCATGCGGCTAGTTGTGAAGGAACCGTAAACGGTGCCACTGACAATGCCCTCCCGGGCCAAAACGAAGTGAAGGAAAACAGGTACCCTCCCTCACATCACCGCAGCTCACGAAGT # Right flank : CTTTCCCCCGTGCTGCGTCTCACATACCTGTTGCTCGACACGGAAGTTACCGCGGCAGGGCCCCGCCCCTGGCGCGGACGCCGGTCCACTCGCACCACACCACCTTGCCCGGTGACCGTTCCGCCACTCCCCACTTGTCGGCCAGTTCCGACACCAGCAGCAGTCCGCGCCCGCTCTCGTCCGACCGGTCGGGGGCCTGGGGTACGGCTGGCACCCCGTCCCCGCTGTCGTGGACCTCGACGCGCACACCGTCCCCGCAGGGCAGCAGCCGCAGCAGGAAGCCCCTGCCAGGTGGTGCGCCGTGCACCAGCGCGTTGGTCGCCAGTTCGCTCACGCACAGCGCCACGTCGTCCGCGCGCTCACACACACCCCAGTCGGCGAGCACCTCGTGCGCGAACGCCCGCGCAGCTGGGACGGACCGGCGCTCTCGGCGGTAGAAACGCTCACGTGAGGAGAGGGGTGGAGTTTCGTTGTTCACGTGACGAGAGTCACGCTCCGTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTAGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 202073-203625 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSST010000015.1 Streptomyces olivaceus strain FXJ2.409 Scaffold13_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 202073 29 100.0 32 ............................. GTGGCCCGGACGGTCATCACGTTGACCGTGGG 202134 29 100.0 32 ............................. GCGCCCCCAGTCGACGGACTGGGGGCGCGTGC 202195 29 96.6 32 ............................G ACGCTCGGAACCTTGATCGTTCTCAAGTTCTC 202256 29 96.6 32 ............................T ACCAGCCACACCTCCCGGAACAGTGACGGGAA 202317 29 96.6 32 ............................G CGTGTGGGGAGTCCGCCGCGGAGGCCGAAGGC 202378 29 100.0 32 ............................. TCCTCACGCGCCTCAGCGACCACCGGACTGCC 202439 29 100.0 32 ............................. TGGCGGGCGTCCTCGGGCCGGGGGACGTCAAC 202500 29 96.6 32 ............................G CGGGACACCGAGGATGCCGTGCGGTCCCGCAT 202561 29 100.0 32 ............................. CGCCCTCGCCTGGGACCGCTGGCCCGACGGCT 202622 29 96.6 32 ............................G GCTGTGGCCACGGGTTGACGCTGCGGCAGTCG 202683 29 100.0 32 ............................. TCGGCGGTGCCGTCCGCGCGGATGATCCACCC 202744 29 96.6 32 ............................G GTGGCCGAGCGCCTCGGCGTGTCCCGCCGGAC 202805 29 100.0 32 ............................. CGGGCCTTTTTGCGTTGGGGCCCTGGTCAGGC 202866 29 100.0 32 ............................. CTCGGCAGCGATGACCGCGCGCTGCGTCTCGC 202927 29 96.6 32 ............................G ACCCTCACGGCCCTGCGCGCCGGGAGCTCCCC 202988 29 96.6 32 ............................G CTGAAGCCCTGCAAGGACTGGCTCGCCTCGCA 203049 29 96.6 32 ............................G ATCGCAGCGCTCGCGCTCCGCCCGGAGGGCTG 203110 29 100.0 32 ............................. AGGCACAGCGGGCCAGGAGCGCCCTCCGCGGG 203171 29 100.0 32 ............................. CCGGGTCTGCATCGACGACGACTTCGGACCGT 203232 29 96.6 32 ..T.......................... CGAGAGGACTCACATGCCCAAGAAGACCAACC 203293 29 96.6 32 ............................G CAGGTCAACGACGTTCACGGCCACGCCGCCGG 203354 29 96.6 32 ............................G CCGCGGGCGTCGCTGGCGAGGCTGAGCGTCCA 203415 29 93.1 31 ..........T.................T GGGACGTGGCCCGGTACTGGCCGGGCCGGTC 203475 29 93.1 32 .......................T.C... CGCCAGGACGTGTCGCCGCTGTAGGCGGTGCA 203536 29 82.8 32 .............T.A..T......C..G GAGCTGCGCGGCCGGTGCCCCGTACGCCGCGC 203597 29 75.9 0 ....C..A.............ACG.CC.. | ========== ====== ====== ====== ============================= ================================ ================== 26 29 96.3 32 GTCGTCCCCGCGCCTGCGGGGGTAGTTCC # Left flank : GGCAGCGACCTGCTGGACGAGGACCTCGGCGCCCTCTGGGACGACGGCGACACCGTCGTCAGCGGCGGCCGCAACTGGAGCGCCACGCACCACCTCGACATCATCCCCGAACCCACCTCCGCAGAGGCGGCCCCGTGAGCGCCGGAACGACCGTAGTCGTACTCATCGCGGCCCCACCCGGCCTCCGCGGACACCTCACCCGCTGGTTCGTCGAGGTGGCCGCCGGCGTCTACGTCGGTAACCCCAACCCCCGCATCCGCGACCGCCTGTGGAGCGTCCTCGCCGAACGCATCCACGACGGCCAGGCCGTCATGATCGAACCGGCAGCCACCGAACAGGGCTGGTCGGCCCGCACCGCCGGCCGCGACCGCTGGACCCCCGTCGACTTCGACGGCCTGACCCTCATGGCCCGCCCACGCCAGAACGGACAACCCTGGCGGCCCACGAACGAGGTAAAGCAAAACGGCATGATCACCTGACAAAACACCAGCTCACGAAGA # Right flank : CTTGCAGAGCTTTGTGTGGACGGTGGAAGCGAGGCGGTCGTCTTCTCCAGGCGGATCGGAAACCGCGGAGCGCCGCCGTGGCCGTCATGATGACGATATACGGCTCGGTTCGGTGAGAAGCCAACGTCAAGGCGGCGAGGCGGGCACAACACGAGCGCCAGCGGTGTCTACGCGACTGGCCGTTTGCTCGCCGCTCGCCGCCGTCCGCGGCATCTCATCAATCGCACTCGACTAGCGTCCACCGTCATGTCGTCCCCAAGCGCTCAGCTGCGTCTGACGGGCCCACGGGCCACGTCGGCGGGCTTGTCGAAGCCTCAGCCTTGGGCGTTGCCCCTGCGAGGCGGCAGTTTCCGGTCGTGAGGGGCTCTCTTCTCATCGAACCTCTGTGCCTTGTAGGTTCGCGTGTGCGCAATGAGTTGTTGCTGATGCGCACGGGCTGACGGGGGATGAGCGATGGTGGGGCACCGGCCGACGGATTGGCATGTCCTGGACCTGGACAA # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCCGCGGGGGTAGTTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //