Array 1 2219570-2217301 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029449.1 Serratia marcescens strain CAV1761 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2219569 29 100.0 32 ............................. GCCTTGGAAGCTCGCTTGTTGATATCCTGCTG 2219508 29 100.0 32 ............................. CGAACTGGCCGAAATGTCGGTGCGCAGTTCGC 2219447 29 100.0 32 ............................. CCCCAAGGCGGCCATGACGTCAGTGCCAGTGA 2219386 29 100.0 32 ............................. CCTGGACTAAACCTCTTGTGCGGTGATTGTAA 2219325 29 100.0 32 ............................. GCCGTGGCCATGACGCCGGCGCAGCGCCAGAT 2219264 29 100.0 33 ............................. TCAGCTTTTGAGCGAACGATATCGTTCTCAGGC 2219202 29 100.0 32 ............................. TAGGTTGTGCGCCAGCAGTCATGCGTGGCCAT 2219141 29 100.0 32 ............................. GTCAACGTAACATTGCCGCCACTGTAAGATCG 2219080 29 100.0 32 ............................. TATCGGCATTTCATCGAAACCAGACTCGCTCA 2219019 29 96.6 32 ............................A GTACGAATATGGCGGCGACTGGGATGGGTACA 2218958 29 100.0 33 ............................. GTGGCGGTAATTATTGGGATCCATCTGGTGAAC 2218896 29 100.0 32 ............................. CGGGCTGCGTTTATATCGCCGGTTAACGCCGG 2218835 29 100.0 32 ............................. AGGTGTTTGCCGTGGTGGCGCTTAGGGGCGAA 2218774 29 100.0 32 ............................. CAGCTTTACGGCAATGTGGATCTGCTGAAACG 2218713 29 100.0 32 ............................. CTGATTGCACGCGGCGGGCCACTGCTTTTTAT 2218652 29 100.0 32 ............................. TTCGGAAAAACCAACGTCTCCCCATCGAGCGC 2218591 29 100.0 32 ............................. GCGCGCTAACTGGGTTGAAAGATTCGGTATCC 2218530 29 100.0 32 ............................. GCTTGGGTATATACGCGATCCCATTTCTCAGT 2218469 29 100.0 32 ............................. GATTCTCGGTTGCCCCTGGCAATGGTCTAAAT 2218408 29 100.0 32 ............................. TATTGGGCAAGATTGTGTCCATGCCATTTTAG 2218347 29 100.0 32 ............................. GTGGCGTAATGAAACTAAATAGATACCCAGTA 2218286 29 100.0 32 ............................. GCATTGCAGCCAGCGGATTTCTGATTTCGTCG 2218225 29 100.0 32 ............................. GCACCGGCGCAGACCGTTACCTGAAGCTGCGC 2218164 29 100.0 32 ............................. GTGACGCGGTAGAAATATGGGTTGGTCTTCAC 2218103 29 100.0 32 ............................. GCACCGGCGCAGACCGTTACCTGAAGCTGCGC 2218042 29 100.0 32 ............................. GTGACGCGGTAGAAATATGGGTTGGTCTTCAC 2217981 29 96.6 32 ..........................A.. TTGATGGATGTTGCATCGGGCGCTTTGGAGGA 2217920 29 100.0 32 ............................. GCACGATTATCGCGCTATTACGGGCTGTTACA 2217859 29 100.0 32 ............................. CTGGCGTTTCACATGACAGGCCGCGTGATGGT 2217798 29 100.0 32 ............................. GAGGAAGAAGACGACGAAGCAGCCTTTACCGC 2217737 29 100.0 32 ............................. GCCGCCAATTCTTTTTGCGTCAGGCCGAGTTG 2217676 29 100.0 32 ............................. CGATTATGAGACCCTTGATAGGGCTATATAAA 2217615 29 100.0 32 ............................. GTGTCACGCTGTACAACCCGCGCACCATCGAA 2217554 29 79.3 12 .................ACC.T.G....C CATACGCGGCAA A [2217533] Deletion [2217514] 2217512 29 100.0 32 ............................. ACGAAATCCGGGCTTTCTCTGAGAAGGCGCAG 2217451 29 100.0 32 ............................. TAGATCGCATTGCATCCGGCGTTATGACAATA 2217390 29 100.0 32 ............................. TTGATAAGATCGCTGTTGATATCGCACAGCAG 2217329 29 82.8 0 ............T.........GG...AA | ========== ====== ====== ====== ============================= ================================= ================== 38 29 98.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ACGCCGCGTTCAGCCCGGTAGACGTGGCCGGCGAAGACCGACAATGGGTGGCGCTGGCGCCGCTGGCGGTAGACGAAAGCCTGCGCCGCCAGGGGCTGGCTGAAAAGCTGGTTTACGAAGGCTTGGATTCGCTGAACGAATTCAGCTACGCCGCGGTGGTGGTGCTGGGCGATCCTGTTTACTACGGCCGCTTCGGTTTTAAACCGGCCGCCGCCTATGGCCTGCATTGTCGCTGGCCGGACACGGAAAGCGCGTTCCAGGTCTACTCGCTGGCGGAAGACGCCCTGAATGGCGTCAGCGGCGAAGTGGCTTTTTCGGCGCCGTTTAATTGCTTTTAACTTGTTGATAATTAATTTTAATTTGGTGGAAAAGGATTTCACCGAAGTGTATTTCAAAATTTGATTATAAATCAAATGGTTGTGTTTTTTCAGAAGGCGAAAATATTTGGTAGGATTTAAGGTCTTTAAAAATACATTTTAATTCAACCATATACTCTAAGA # Right flank : TTGAACGCTCGCAATCACATAGGCAGCTTTGAAATGCAGGGGGAGGAAAAAACCACGTAATGAAATCTGTTAACCAGGAAGCAAATACGCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCCACCTGGCAGTGAAACGCTAGCGTCAGCTCCCCTTTACCGCGCAGCGCCTTGGCGCCTTTGCCGGCTTGATGTTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCATGCCGCTCGGTAAACGCAGCATATAGAGGTGCCAGTGGGGCAAGTCCATCATTGGGGTCCTGTGCAAGGGTAGAAACGACATCAGGCCGCCATAGCCAAGCGCGGTATCTCTATTTTGTCACGATTTAACGATGGATTTCACCACTGGCGGAACGGTTTGTTTATTCTGTCTTGACGATAAAGGGTTATTTTACA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //