Array 1 172-3257 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFFN01000035.1 Moorella sp. Hama-1 Hama1_contig35, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 172 29 100.0 36 ............................. CCCAAAACCAGGGTTTTTTGGTCGCAGTCTTTGTAG 237 29 100.0 36 ............................. AAATTAAAGGAGGACGATTAACATGGCGGACCAAAA 302 29 100.0 35 ............................. TTAAATTGCACCAGTAAATTACTAATCAGGTTAAA 366 29 100.0 36 ............................. ATGACCCCGAAGGCAACATGAAGAAGGTAGCCGAGA 431 29 100.0 35 ............................. ATAAAAATAAAGCTGATATATTTGTAAGCATACAT 495 29 100.0 37 ............................. CTAAAACGGTACCGGTAACGGTGGCCCTGATGGCCAG 561 29 100.0 37 ............................. TTGCCCGGGCGGCCGGGTACAGGATCACCCGATAACG 627 29 100.0 35 ............................. TGTCCGGTTCTTGAACAGCATTACCGTCATTAAAG 691 29 100.0 37 ............................. GAAGTATAACAACGACGTAGAATTTACAAAGTACTGG 757 29 100.0 37 ............................. ATCTCAGCGCAAATAAACCCGTACCGCATATTTTCAG 823 29 100.0 35 ............................. TTTACCCCCTTCCGGCTTGCTAACTGTTTAATCTC 887 29 100.0 34 ............................. TTTTGACACGGGGGCGGGAATTGAAGGTAGCTGC 950 29 100.0 37 ............................. TTTAGGTTATGGAGCCGGGTTCCCGGCATGGCTACCA 1016 29 100.0 36 ............................. GCGACATAATCAATTCTACGACAAAGGGTTTTGCGG 1081 29 100.0 36 ............................. TTGCAGGTAAAGCCCCTGATCGTCAGAAGGAGCCAC 1146 29 100.0 36 ............................. ATAAGGGGCGGGGCAAAGGAGGAAAACACGATGCGA 1211 29 100.0 36 ............................. TTATAACATCATAGCCAAATTTACGAGACTGGCTAA 1276 29 100.0 36 ............................. TGGTAAACTGAAAGGGAATTTATTCGTAAATGCAAT 1341 29 100.0 37 ............................. CTGAAGCTGGCCGGGGAGATGGAGCAGGCTAATATCG 1407 29 100.0 37 ............................. GCGTGAACCAGGTGGACCTGCAGGACGCCCTGGGCCG 1473 29 100.0 38 ............................. TAACTGAGATGTTAGGTTCCCAATTGGCAGGCCTCTCG 1540 29 100.0 36 ............................. CTGTTTTTAAGTTCCCTGACTGCGATTGAGATATTG 1605 29 100.0 36 ............................. CCGGGTCAGTACCGTCGTTTACCCAGGCTACCAGTA 1670 29 100.0 36 ............................. AGGTTGTGACGGGATGGCAACTGGTAGACAGGGTAC 1735 29 100.0 36 ............................. ATCAATGTAACGCTAAATGTATCTACTTCCGGCGGT 1800 29 100.0 37 ............................. AATGGAAACCTTACAGGCAATCTTAAGCCGCCTCCAG 1866 29 100.0 35 ............................. TTGTTCCATTTCGCTTGGAACCGGCTCTAGCAATA 1930 29 100.0 36 ............................. CCGCCTGGTCGAGGACCATGCCCGGGACATTGTACG 1995 29 100.0 35 ............................. TCACGAAGTCACCTTTCGCAAAATCAAATAGCCAG 2059 29 100.0 36 ............................. AATAACCCGGCATGGACCTCATCCCAGCCGCCAGTG 2124 29 100.0 36 ............................. CATGGGGGACGGCTTTTAGCGCGCGCCGGACCAGCT 2189 29 100.0 34 ............................. ATCTTCCCTCAACGATCGCATCTTTAAGTAGCTG 2252 29 100.0 35 ............................. GCTTATTAGATCGGCTCCGGGAAGCAGTGGCGAAG 2316 29 100.0 37 ............................. TCTGCTGCCACTGGCCGGTGAGCGGGTCGATCACCGG 2382 29 100.0 37 ............................. TGGCACCCCGGACAAAGTAAAGGCCGGGCTTACCCCG 2448 29 100.0 37 ............................. AGGCATTGCTTTCGACCACTTCGGTCATCGGCCGCCC 2514 29 96.6 35 ...............G............. ATCATACAGCGTCATAACCGGGATACCAGTCACTC 2578 29 100.0 36 ............................. ATGCGCCCGGCGGTAGTGGGGCCGGGGACTGGCGCG 2643 29 100.0 34 ............................. ACGAATACCTATGGATGATAAAACCATTTTCGTG 2706 29 100.0 36 ............................. CGGGTTTTGCCAGGTGGCCGAGGCGGCTGGGGGCCC 2771 29 100.0 36 ............................. CCGGAAAAGCCCGGTGAAGCCGCCCGTGTTATAAAC 2836 29 100.0 36 ............................. ATAATATCCTGATCGGCTTTCTCGAAGTCGAAAACG 2901 29 100.0 37 ............................. GCTGCTGGGTGTATCAGGATGCATGGGCCGACCGTTA 2967 29 100.0 36 ............................. CTGGCAAATGTACCTGACACCGGTATCGGATTGGCA 3032 29 100.0 36 ............................. GTAAGTTACGTATTCCTTGAGCGGCAGCCGCTGATT 3097 29 100.0 37 ............................. TGCGTGGTGCAAGTATGGTACAAGCTGCCGAATCAGT 3163 29 100.0 37 ............................. TCGTGGAAGTAAAGGGGGTGCTTGAAGAAACCGACAA 3229 29 93.1 0 ..................A..C....... | ========== ====== ====== ====== ============================= ====================================== ================== 48 29 99.8 36 GTGCCAATCGGCCATAGAGGAATCTGAAC # Left flank : TTCTGCAGCAAGTTAATCATATCCCCCATTTACCTCACTTCCGTAGTGGCCTACGTCAGTGAGTTTATCTTAGGGTGGGGTACTTTTCAATGACTATGGTGGTATACTATTAGGCTATCATAAACAGAATCTGAACTCACGACGAAAAAACCCTGGGGAAAATTAAATTGGG # Right flank : CGGAAGCGCAGCAGGTTGCGGTTATCAAAACCCGGCTCCAGGGATTTATCCGGCGGAGGGCGTGGCTCTTGGTGGCCTCCGGCTAGGAACTCCCTCCCTCCGAACCCATAGTCGTTTTTGATATTAGTTGGCTTTACCAGGTCTAGTTAAGTGTTGCCTTTTTACCCCGGATCATTATCATAATGGCATGCCTTTTTTACCAAAGTTGTGATTTCGTGTTCGTAACACGACGAAGGCTACGCTATTTTCCTGTAAATGATACTCCGTCTACTCAGATGGCTCAGATGACCTGTTATTTACCCATCATTCCAGGATTAACGAAGGTATGGACGCGGTGGAGGTCGGTCGCCGTTGGATGAAAGAAAACGTGGACGTCGTTGAAAGCTTGTTGAAATAAACGGGCGTAAGATAAAATCTATATCAAAGAACTTACTGACTCACATTCCGCACCCTGTGAGCAACTAAAAATATTTTTTAGGTGCAGAAGAAAATAAAAGTAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCAATCGGCCATAGAGGAATCTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 1-2259 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFFN01000041.1 Moorella sp. Hama-1 Hama1_contig41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 1 30 100.0 38 .............................. AATGTATGAAATTTCATGTCAAAAAATAACATCTCGCA 69 30 100.0 37 .............................. AATATTTAGATTCTGCAGGAATTGAACATATATTTGA 136 30 100.0 36 .............................. GTTATTAAGACGACGTTTGTGTTTTGTACCCATATA 202 30 100.0 37 .............................. AAAAATGTCTTTTAGGTTCACATCTTCCTACAAAACC 269 30 100.0 39 .............................. AAAATAATCATCAAAAAAAATAATAATAATCTATTGCAA 338 30 100.0 38 .............................. ATATCAATCATTGATACTTGATATTAATATCAAGTATT 406 30 100.0 37 .............................. TGCGCTCTTCTTTTTTCATCGCAGGCATACTTTCAAG 473 30 100.0 41 .............................. AATGTAAATAAATGGTATAATTTACAATTATCATGTTGTGG 544 30 100.0 37 .............................. TTTGTTATGGTTCCGTTATACAAGAATATCGTATCAT 611 30 100.0 38 .............................. TATCCTATGCTTGTGATGAGATTTTCTGTCTTTGCCTC 679 30 100.0 38 .............................. TCCTATTCGTTGCATTGTCATTTATGCCAATTTTGGGT 747 30 100.0 38 .............................. ATTGATTCATGGCTTCCTGAGGGTCTGGTATATCTGGA 815 30 100.0 37 .............................. TAGCTTGTTGAGTCACACCTAATACTCTTGCTAATTC 882 30 100.0 35 .............................. TAAATACCGTTTTTTGTGGTATTTCCTCTGTATCA 947 30 100.0 37 .............................. CCATATATCGAAAAAATTTTTAAAAACTAATTTAAAA 1014 30 100.0 38 .............................. CGGAAAGACAGATAGCAGCGGCATTCGGAATAAAGTTG 1082 30 100.0 39 .............................. ACCCACGTCGCAAATGCTGTTGTATCGGCAGCGGCTATG 1151 30 100.0 38 .............................. TTTCTTTGCCTAATCTTTGCGCTTGTTTTTGAAATTTT 1219 30 100.0 37 .............................. ACGAACATAACAGACTTGACAGCTGACCTTCCAGACA 1286 30 100.0 37 .............................. ACACAGGAAGCAGAAAAGAATGGTGCAGTTTTGTCGA 1353 30 100.0 37 .............................. ACAATAAGCATAATTAAAGAGGCTATTACGCCTCCCA 1420 30 100.0 35 .............................. CTGCGATTGTATGCCCATCGGGTATACTTATTAGA 1485 30 100.0 36 .............................. TTAAACATGCTCGGTATAACCAAATTGTTTTATCAG 1551 30 100.0 37 .............................. CAATAACAAAATGGAATAAACCATATCGTCAAGCAAA 1618 30 100.0 37 .............................. ATATCTATTTCATTCGCTGATATATTACCAACTGGCA 1685 30 100.0 39 .............................. TTCAAACTTTGTAATGCCTTTGATAAAGCATCGGCTGTC 1754 30 100.0 37 .............................. TGTAATAAAACAGGAAATAGAATATGATGGAGCATTG 1821 30 100.0 40 .............................. CCATATATTCGTCTTACATCCGCCTTCATCTTGTCTAAAA 1891 30 100.0 37 .............................. ATCGGACATTGTAAGTATCTATCGTTCCATCTTTTCG 1958 30 100.0 37 .............................. TATCAGAAGATTGTATTATATCTGATGCTTGCCAATT 2025 30 100.0 39 .............................. AATTTGCCTGCAATCATAGAATCGGGTATACAATTGTTA 2094 30 100.0 38 .............................. ATTTCATATATTCCAACGATTGTGACTACCATAGTATC 2162 30 100.0 38 .............................. TCATGTTTTCAATGCTTTCACTATATGTGGCATCTTGA 2230 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 34 30 100.0 38 GTTTTTAGCCTACCTATGAGGAATTGAAAC # Left flank : | # Right flank : AAGCCTCCGAGTGTACCTCATTTGAACGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 229966-237337 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFFN01000003.1 Moorella sp. Hama-1 Hama1_contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 229966 29 100.0 36 ............................. GATGTCGTGGTTGCCTTGTACTGCAAGCACCTTGCA 230031 29 100.0 36 ............................. TCTAAATCTTCTACATCGTCTTCAACACAAACAAAT 230096 29 100.0 35 ............................. TTAATCTGATTTTCTACATCAATAACCATCTGATA 230160 29 100.0 35 ............................. TCTGATAACTACCATCCATCAAAGCAAGATCAGTA 230224 29 100.0 36 ............................. GGTGATTAAAGTGGATATTAAAAAATTACGTAAAGA 230289 29 100.0 36 ............................. TTTTTGAAGGCCATTTACACCAGGGGGCGGGAATTA 230354 29 100.0 36 ............................. AACTTGGTGCTAGGCTAAAAGAAGCGGGTATAACTG 230419 29 100.0 38 ............................. ATCAGAATACCTGGACCCTGACCGGCAGCGCGGATAAC 230486 29 100.0 36 ............................. ATGGTCGTCAGGGAGGGCGGCTGGGTTGTTCCGCCC 230551 29 100.0 36 ............................. CTGTAAAGGGTGTATCTAAAAGGGATATCTTAAATG 230616 29 100.0 37 ............................. ATTATCATTATCAACTTCAATATTTATCCTCATTTCA 230682 29 100.0 35 ............................. AGGGTAAGGGCGCTTTTAATCGGCCCTGGGGGACC 230746 29 100.0 37 ............................. GGCTGATTTTACCGCGAATGACGTTTTAGGTGAAGTA 230812 29 100.0 35 ............................. TGAGATGGGTTAATTTTCCATTAACCTCGTTCAGC 230876 29 100.0 37 ............................. CTTGAGATAACCTTCATCTGGAGCCGCCAGGGCAGGA 230942 29 100.0 36 ............................. TTCTTTTATTGCTGACATAGAAGCCGGGCGCAGCAA 231007 29 100.0 35 ............................. GAACCTTGCCGAGGTCGTGCAGAACAATACCAGAG 231071 29 100.0 36 ............................. CCGTTATCTCTGCCTTGATCTGTTCGCTTACCTGCA 231136 29 100.0 36 ............................. CATCAAAGAGGCCATGCTGTTCCAACAAAAAATAGT 231201 29 100.0 35 ............................. TCAAGGGCGGCCAGGTCAGGAAGAAGTGATGTAAA 231265 29 100.0 36 ............................. CGGGGATGTGGAGCTGGTCCAGGGATTTCAGGACGG 231330 29 100.0 36 ............................. TTTGAAGTGCGTCGGGAAATTGTCCGAGCACTGGTG 231395 29 100.0 35 ............................. AAACGATCCACAAACACTTAAAAAAGTATGGAATA 231459 29 100.0 36 ............................. CAGGATGCTATGAACCAGTTGGCGACCTGGACGGCC 231524 29 100.0 37 ............................. CAAATACGGGATAAAACCCTATTGGACGGCGGCCCTG 231590 29 100.0 36 ............................. TGCCCTGAAACCCTCAAAAGAACGGGATATGCCGGT 231655 29 100.0 37 ............................. GGTGGTGCAAGCGCAAAAAAGGACATACCCTTGATTA 231721 29 100.0 36 ............................. AAAGCCCGGAGGACTGGCAGAAGCAGCAGGAATTAT 231786 29 100.0 37 ............................. TAGGGTCGCTAGATAGCGGTTAAAGATGCCGGCTTTA 231852 29 100.0 36 ............................. ATAACTTCAGCCACCTGCGGCACTACAGCATTGCCT 231917 29 100.0 36 ............................. TGTACCGAAGTACGGGGACATCCGGCAATTGCGTGG 231982 29 100.0 35 ............................. CCAGCAGGACGGGTACAAAACCCTTATCGGAGTGA 232046 29 100.0 35 ............................. TTGGAGATCGACGACAAAAAGCTTGCGAAAAAGGT 232110 29 100.0 35 ............................. AGTTGTCATCGACGGCTACCAGGGTTCCCGCAAAA 232174 29 100.0 35 ............................. GCGGGTATATTACCGAAGCATACCCAACCGAGCCG 232238 29 100.0 36 ............................. GAACTAAATATATAATATTATACATTTTCATCCTGG 232303 29 100.0 36 ............................. GAACTAAATATATAATATTATACATTTTCATCCTGG 232368 29 100.0 35 ............................. GATTATGAATTATTACCCCGGTGGTGTAAGCGGAA 232432 29 100.0 37 ............................. ACGATGCTCATTTTGTACAATCAGGGGAAAATACCGG 232498 29 100.0 35 ............................. TCCTTTACATCAGGGGGCGATGTAGTAAATACGGC 232562 29 100.0 37 ............................. GGAGCCTTATATAAGAACGATGGTATGTTATTTCCTG 232628 29 100.0 36 ............................. GGGTATTGCAACAAACTGATTATACTGTCCTATGGG 232693 29 100.0 36 ............................. GCGGGACTGCCGGGATGATAGGTAAGCTCAATGTAA 232758 29 100.0 36 ............................. CGCAAACCACAGCAAATGCAGCCGGTAATATAATGC 232823 29 100.0 35 ............................. GAACTAAATATATAATATTATACATTTTCATCCTG 232887 29 100.0 35 ............................. CCAGGACTACTCTCAGGTCGATGTTTAGCCTACGA 232951 29 100.0 36 ............................. AAATTAAAGGAGGGCGATTAATATGGCGGACCAAAA 233016 29 100.0 36 ............................. GGGCCACCACGTATGGAAAACCGGCCAGGTATTTCC 233081 29 100.0 35 ............................. TGCTGGTGGCCGGTATATTCGGCCTTTTGTCCCTG 233145 29 100.0 36 ............................. TTGCCTGCCTGTAGGAGATAAGATAAGCCACAATAG 233210 29 100.0 36 ............................. GGCATCAATCGAATCCTCAAAATATAGGTCTTTTGC 233275 29 100.0 36 ............................. GATGCAATTAAAGTAGTTAACTACTACCTACAGAAA 233340 29 100.0 35 ............................. CTGCTCGTTATCCCCCTGGCCGCCGGGGTACTGCT 233404 29 100.0 34 ............................. TAGTGATAATCCGACAGTTAGAAGTAAGGGGGCT 233467 29 100.0 36 ............................. TCGCTACAAGGAAGAGAAGAAAAACCTTTTTGGTGA 233532 29 100.0 36 ............................. TCGCTACAAGGAAGAGAAGAAAAACCTTTTTGGTGA 233597 29 100.0 37 ............................. CTTGTAGGGGTGAATGTTGATGAAAGACGGTATGGAG 233663 29 100.0 36 ............................. GACATGATAAGGGTTTTTCATTATAGCATCATACAG 233728 29 100.0 36 ............................. AATAGAAGGTTATTGACAAAGAAAACTCCGTAAGTT 233793 29 100.0 36 ............................. TGCGTACCATTTTTTGATAAACATTATAACCACCTA 233858 29 100.0 35 ............................. GGGTTGAAGTTGTAAAACCCGTTATGGCGAAAGGA 233922 29 100.0 36 ............................. TGACCAGGGTCTAAGCAAATAATCATTGTATTACCC 233987 29 100.0 36 ............................. GACGGAACATACCCTTTATGGTTATCGTTAAACCGC 234052 29 100.0 36 ............................. AAATGATGGGGCATACGGAATATCGTCAAAAGTAAT 234117 29 100.0 35 ............................. GGGATTGTTGCTGTCCCGCAATGCCTTCCATAAAA 234181 29 100.0 37 ............................. TTTTTCATCCTCCGTTTTCCCCGGCATGTCTGCTACT 234247 29 100.0 35 ............................. GTAATAAGCTATAATACCGATAAGAGCTTGAGAAT 234311 29 100.0 36 ............................. TTTCAAGTTTGGGCAAGCCAAAGGTTTTACCTAATT 234376 29 100.0 36 ............................. GCCAGACAAGTTTTACCCCGGCAGCTTTTGCCCCTT 234441 29 100.0 36 ............................. TAATCGTACATCAGGGCCACCAGGACTACTCTCAGG 234506 29 100.0 37 ............................. GATGTTTTTTACACTGTCCACCAGGCCGCCTTGTCCC 234572 29 100.0 36 ............................. TTATGCAATCAGAAAGCGGCGGCAATCCGCAGGCGC 234637 29 100.0 35 ............................. GAACTAAATATATAATATTATACATTTTCATCCTG 234701 29 100.0 35 ............................. TATTTATCTACCCCTTACATGGTAAATCCTATTAC 234765 29 100.0 36 ............................. CGTCCTTTCTTTGGTGTTGGTAATAAAGCCGCACTC 234830 29 100.0 36 ............................. ATACAATTACTTTAATAACCCAGTTTGTTAGTAATA 234895 29 100.0 36 ............................. TACCCTAGATTATTTAATCAGTGAGTTACGGGAAGC 234960 29 100.0 36 ............................. AGGTGAGCAGGTGCAGATCTCCGGCCAGGTCCAGGG 235025 29 100.0 37 ............................. AAGCCTATTACGTTTGCGGCGGGAAAACTGCCTACCG 235091 29 100.0 37 ............................. TGATGGCGATATAACTATCGGCAAAACGGTTATCGAA 235157 29 100.0 35 ............................. GACAATAACGCCGTCGTAACCCATCTCGATAATGG 235221 29 100.0 36 ............................. GCTATTTCCGGGGCGGTGAACCTGGTGACGTTTATT 235286 29 100.0 37 ............................. ATTTAATTTTTAAATAAGGTACGCCTTTTTCATTTAA 235352 29 100.0 36 ............................. AGGGAGAAGGAACCGCTTCATAGTAAACAGTCTGCC 235417 29 100.0 36 ............................. TGCAGAATAACAGCGTTTACTGCAATGTCGTTATTA 235482 29 100.0 35 ............................. CGGTTAAACACTTCCTTAAAGGTTTTCCCTGTGAA 235546 29 100.0 36 ............................. GTAGATGAGACTATTAATGCAACTGATGTTGTTGTA 235611 29 100.0 36 ............................. TATGATAATACAAGGAAAAATTTAGTATATATGAAG 235676 29 100.0 36 ............................. ATCTAACCCTCCCCCTTACCGTTAACAGATTGAAGG 235741 29 100.0 37 ............................. GATAAAATTTCTTAACTTGAGATGTTTTACTTTATAC 235807 29 100.0 37 ............................. GCAGGTTAATCCTGCCGAAGTAGTGTTATCCAGGCGG 235873 29 100.0 37 ............................. TAAAAGATTTTTGCGCTTCAGCTTGCGCCTGCAAAAA 235939 29 100.0 37 ............................. GGGTTGAAGTTGTAAAACCCGTTATGGCGAAAGGAGG 236005 29 100.0 36 ............................. ACTAAAGATATAAAAGATAAATTTGATAGAATTGTC 236070 29 100.0 37 ............................. GCTGCATAACTGTTTGATCATCGCCGTCGCAGTCATG 236136 29 100.0 36 ............................. CCCCGTTGAGCCCATCTTGCAAAGCTTTGATTATGT 236201 29 100.0 36 ............................. CCGGCCCCAGCATCGGCTCCACGCTCACGAACCTTA 236266 29 100.0 36 ............................. TCTCCAGACTTAGGATCTGGTGGGGTTAACCCGTGG 236331 29 100.0 35 ............................. CCGGAGTATGAGATAATATGTTTGTAGAACGCTTT 236395 29 100.0 37 ............................. GAAGAATTGCGCCTGAAGGTGTTACATCTGATTGCTA 236461 29 100.0 36 ............................. GTACACAGTATCATGTTTTTTCGGGCGAAAAATCCA 236526 29 100.0 35 ............................. CGTTTTATGTCTTTTTTGTGGCTACGGCTCCAGCG 236590 29 100.0 36 ............................. CAAAACGGGTAGAGAGCAACAACCTCAAGCGCGACG 236655 29 100.0 36 ............................. CTTGTGGCGCAGAAATATCGGAGACCCGCGCTCTGG 236720 29 100.0 37 ............................. ATAGATTATATAACTGCTTATGGAATTTGGAATGTAT 236786 29 100.0 36 ............................. GTCTAAATCGTCAACTTCAATATTTATTCTCATTTT 236851 29 100.0 36 ............................. AATTTACGAGACTGAGAAAAAAATTTTATCCATTCT 236916 29 100.0 37 ............................. GGGCCTCCAGGGCCTCCACCCGGGCGCCAGGGCCTCC 236982 29 100.0 36 ............................. GGGCCTCCAGGGCCTCCACCCGGGCGCCAGGGCCTC 237047 29 100.0 37 ............................. ATTTGATTGTCATTTTTGATGCCTCCTTAGTATACTT 237113 29 100.0 36 ............................. TGTAATTGCGGCCATGAATGCCATAGGAAGACTTAG 237178 29 100.0 36 ............................. CCAGCCCCCTCAGTTGCCCGGCAAAACCCGGATAAA 237243 29 100.0 36 ............................. ATGACCCCGAAGGCAACATGAAGAAGGTAGCCGAGA 237308 29 93.1 0 ..........................T.T | T [237332] ========== ====== ====== ====== ============================= ====================================== ================== 114 29 99.9 36 GTGCCAATCGGCCATAGAGGAATCTGAAC # Left flank : AGACCATTTTACATCGCAACCTGAAGAGGAATATTCGTTATAAAAGCTTGATACGGCTGGATCTCTATAAGTTAATTAAGCATCTCCTTGGTGAGGAAAGCTATTCCCCTATGAAGGTGTGGTGGTAATATTAGAGTAATTCTTGTCTACGATATTAACACGGAAGACAATGACGGTAAACGGCGGCTAGTGAAAATCATGAAGACCAGCCGAAAATATCTTTCTCATGTACAGAAATCAGTTTTCGAGGGCGACATTACTGAGGGGCAAATTACTTTGCTTAAGAAGGAGGTGCTGGGTATAGTTAATAAAGGAAAGGATTTTGTTATTATTTACAGTCTCAAAGATGGTATTAAGTTAAATCGCGATATCTTAACTGATACTCCAGATCCCACCAATAATTTTCTGTAAGCTGCCGATAGTTTGCAAAACCGGAGGTTTGACGCAGGATTTGGTTTTAAGCTACTCAAACCTTAGGTGGGACAACTATTTTTTTGCGG # Right flank : TTGTCAACTCAAAATTCCCCCAGATCGTCATTTAAAAGTACCCCACATTGAACCAAAAAGCACAAGCTATTTAACTTAATTTTTGCTGCTCCAACCACTCCTTCGTTTCCTTCATGCGATAGGAATTGCCGTTCATATTCACGATATAGGCCTGATGGGTCAGAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCAATCGGCCATAGAGGAATCTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 179837-192336 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFFN01000005.1 Moorella sp. Hama-1 Hama1_contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 179837 37 100.0 37 ..................................... ACTTATCCCTTAAAACGCGAACTGAGAGACGAGCCTG 179911 37 100.0 37 ..................................... TTAAATGGGCACCCTCTATAGGAGCATGGCAACGGAT 179985 37 100.0 38 ..................................... TGTATTGATACCGGCTCCTTTGTGTGGGGGCCAGTCAC 180060 37 100.0 37 ..................................... GGGAGGGGCAGAAAGGAGAAATATGATTACCGAAGAA 180134 37 100.0 35 ..................................... CCCCATGTGGGGGATGCGCCGGACGGCAACATGGT 180206 37 100.0 37 ..................................... CCCCTGATTGAAGTCAGAGGCTTCTAGGGATTGATAC 180280 37 100.0 36 ..................................... ATACTAAAGATGCAAACAGGGGAGATAACCAAACAA 180353 37 100.0 38 ..................................... AATCTTGCGGGATAAGCGAGAAAGAAGCCCGAAAGGTA 180428 37 100.0 41 ..................................... AAGTCCGCACCACCTGGGGAATACTCCGCCTGAGTGCGGAG 180506 37 100.0 35 ..................................... TGTAAGCGTGGAGCCGATGCTAGGACCAGTAGATT 180578 37 100.0 38 ..................................... TTGATTTGGCCTTCAACTGGCCTGTGCAGGACAACCTT 180653 37 100.0 38 ..................................... GGGCATTTGGTGTTTATAGCCGCGAAGAGTTTCGGTAT 180728 37 100.0 36 ..................................... TAGGCGGGATTTACGGCCACAAACTGACGACCGGCC 180801 37 100.0 35 ..................................... AGGATAAAGGGAACGATTATTGAGGAGTGTTATTT 180873 37 100.0 35 ..................................... AGCTTCGCCTTGCATCAGCAGGATTTTGTCGGTTA 180945 37 100.0 36 ..................................... GCTCAATGGGGTGTACATTTTGTGATGTGCCCAAGG 181018 37 100.0 36 ..................................... GTGGAAAAGACGCTGGAAAGAGGTGTTAGGAATATA 181091 37 100.0 36 ..................................... GCCAAGTACGAAGACGGCAAACTAAAAATCGTCTAC 181164 37 100.0 37 ..................................... TTACATTGCATCATTCCATCAGCTCAAAAAAACAGGG 181238 37 100.0 35 ..................................... AAGTCTGCAACCTCACCCTGGACGATGTGTCCCTT 181310 37 100.0 36 ..................................... GAATTGTCGCCGCCAACGAAGTCCGCACATGGAATA 181383 37 100.0 36 ..................................... CAGTAGTGATGCCAGTGCGCCCGGCGGTAGTGGGGC 181456 37 100.0 37 ..................................... ATAGCATACATACCGCCGCTATGCCAGCGAGGATAAT 181530 37 100.0 36 ..................................... GCAAACTGGCTGGGCCGACGTGAGGGGTATCCCGAT 181603 37 100.0 36 ..................................... ACTCCTGCGACCCGCCGGATACACACCCTTTTTAAC 181676 37 100.0 39 ..................................... GGGCCAAAAAATACTTACAGTATGAAGCCCCCTATAAGC 181752 37 100.0 34 ..................................... GAGTGGCTGATCCTGCTTTACCACTCTTTGGTAG 181823 37 100.0 35 ..................................... TTGACCCCAACGCTCTCCAGGCGGCGGCCCTGGCT 181895 37 100.0 35 ..................................... CATAGTTGGTGATAATGCCGCGCTCGTGGCCTTCT 181967 37 100.0 36 ..................................... GGAGTAGCATAGGAGGAAGTAGCTGGTCCGTGTCCA 182040 37 100.0 39 ..................................... ACCGGGGCCATAAATCAGGCATTAGCGACCTTCAGGGCG 182116 37 100.0 37 ..................................... AGGCAAATTGGCAATTAGCACTGTTATCGCGAAGCTT 182190 37 100.0 36 ..................................... AACTCTCAGCTTGCGGAAGACGAGATACTTGCCTAG 182263 37 100.0 37 ..................................... GCCTAATCTGCCGGACATCCTGGCGGGTTAATTTTTT 182337 37 100.0 36 ..................................... AACCCAGGGATGCGGCAGGCCGACGGACTCGGAAGC 182410 37 100.0 35 ..................................... ACACAATAAAATAGCTATCTATCTTCCCGATCCTC 182482 37 100.0 36 ..................................... ACCCAGGGATGCGGCAGGCCGACGGACTCGGAAGCT 182555 37 100.0 38 ..................................... TTAGGCTAGCATCCAGCAGCAGGGCCACGTTGCCCAGC 182630 37 100.0 35 ..................................... TGCCCAGTCGACCCGGCAGCATTGGCAGGACCTGG 182702 37 100.0 37 ..................................... TTGGCAGAAACATACTCATTAAAAGCACTACCAGCAT 182776 37 100.0 36 ..................................... AATTTTAGTGTGCAAGACCAAAATTGCGTCAGACAG 182849 37 100.0 35 ..................................... GATTATTTTTATACCCGGCGACTTGAAGCAAAGGC 182921 37 100.0 37 ..................................... ATGGAGATAAATATTAACAGGGGCACCTTTCTAAAGG 182995 37 100.0 37 ..................................... GGCATTAGAAGTAGCAGGGGTAGGGGATGCGAAAGTC 183069 37 100.0 37 ..................................... TGAAATAGAAGGTAATACACTTTTTCTGCGCTTGCGC 183143 37 100.0 38 ..................................... TGGTCTACAGCGGGTGGCCTAAACTAGAGGCCCTGATG 183218 37 100.0 36 ..................................... AATCTCATGAGCATCATCATGGACTGGTTCAAACGC 183291 37 100.0 36 ..................................... GCGGAAAGCCTGCTACAGCAGGCGCCCGGCATGGTG 183364 37 100.0 35 ..................................... TCCAGTCGCGGTACGGGTCCAGAAGACAGGGAAAC 183436 37 100.0 35 ..................................... AAGGCGTTGCTGGCTTTGGAAATGAACACGTCTCC 183508 37 100.0 37 ..................................... AACGACAGCGCGGCAACAATACAGCTAAAAGACGGAG 183582 37 100.0 36 ..................................... TGTCCTAACCCGATGCGTATCCCGGACTACTATAAG 183655 37 100.0 37 ..................................... CAGCTTCCGCTCATAATAGGCCGCCGTGACGCCGGTG 183729 37 100.0 37 ..................................... GCCACGAAGGGCTTCTTCCCATGCCAGTAGGGGTTCT 183803 37 100.0 34 ..................................... TTGCCTCCCCTCCCCGGCGGCCCCACGTTGCCCT 183874 37 100.0 36 ..................................... AAGATCATGGACCCGGCCACTGGCCTGGAAAAGATG 183947 37 100.0 35 ..................................... CAGGAGGCGGCCTCGGAAATCGGGAAACGCCTCTA 184019 37 100.0 36 ..................................... TTGACCAATTCTTCCCAATCCATTTTTCTCCCCTCC 184092 37 100.0 34 ..................................... AAATACCTGGGGCAAGACGTGGGGGGACTTAAAT 184163 37 100.0 37 ..................................... TTGTCGGCGTACCCCACTGGAGTCCAGGGGCGGATCT 184237 37 100.0 37 ..................................... TATGACGATACGCATCCGGAGGACGTAGATACCGACG 184311 37 100.0 37 ..................................... AAAATTTATAAAGGTGAGCGAAAACCGCCTCTGGCTA 184385 37 100.0 37 ..................................... AAAGGCCAGCGTGTGCCGGTAGTCCAGGGCATAGCTT 184459 37 97.3 36 ...............................A..... TAACTTTTTTCGTAAGTCCACTTCTTCCAGGACGGC 184532 37 100.0 38 ..................................... TAATACCGGCTGGCGGGCAACGTTAGCCGTGACGGTAG 184607 37 100.0 35 ..................................... GAATTTATCCGGGTGCTGGCGGCGGATAACTTCCG 184679 37 100.0 35 ..................................... TTTGCAGCCTGGCGGCGGGGGATTGTAGAATTTAT 184751 37 100.0 36 ..................................... GAGTATCGTGACAGTCAAATGTCACCTGTGTTCCGG 184824 37 100.0 36 ..................................... TGGGCAATCGGTCTCTACGCAACTACAGCATTTTAG 184897 37 100.0 37 ..................................... TAGATGTACTACAACTTTGACACCAGCGACCCGAACG 184971 37 100.0 37 ..................................... TATGACGATACGCATCCGGAGGACGTAGATACCGACG 185045 37 100.0 36 ..................................... GGGTAGAGCCCGAATTGATCGGGCTCGCATGTAGAC 185118 37 100.0 36 ..................................... ATCCACCCAAACGACGCCATGCGGCCGACTGATCAG 185191 37 100.0 37 ..................................... TTGCAAAGGGCGCCATCTCTTACAACAGCGCACATCC 185265 37 100.0 36 ..................................... TTTGAACTTTGCAATCATGTAGCAACCCTTAAAGGC 185338 37 100.0 37 ..................................... CCAGAAGAGTGCGGAACGGACCAATCAGCGCCTGCGG 185412 37 100.0 35 ..................................... ATACCGTCGAGCTCCTGGCCGCCGGCGCCGTGATG 185484 37 100.0 34 ..................................... GATTATGCTGATGCTTACTGTACCGGGGCCATCA 185555 37 100.0 35 ..................................... TAAAATTCGCATTACCCATGGGGCTGCCGCTATGC 185627 37 100.0 35 ..................................... TGTAAGGGATAATCTATTCAACCTCAGTGTTTTCA 185699 37 100.0 38 ..................................... CAATGCCAATGCCACGGTAGACCTGACAAATGTGACTG 185774 37 100.0 36 ..................................... GAGATTGAGGAACACCCTTTGCTGGACCTCCTGGAC 185847 37 100.0 36 ..................................... TAAAAACCCACCTGATGATTTTATTCGATACTTGAT 185920 37 100.0 36 ..................................... TGAAGGATGGAAGGTTGCTGCAGAAGATTATTGGCG 185993 37 100.0 37 ..................................... AGGATCTGGCTTTCATTCGTGACGACGGCACCAACAA 186067 37 100.0 36 ..................................... AGACCGGCCATGTCAGCAGCCAGCTTTACCATGCGC 186140 37 100.0 35 ..................................... GATAAGGTCCTGCGCCGGGGCGAAAAAGAGGATGT 186212 37 100.0 38 ..................................... ATGGCGATGATGTTAAGCTCTATCTGCTCCCTGGTCCG 186287 37 100.0 37 ..................................... CAATCCCTGGATGACCATATCCAGGAGGGAGTTCGGT 186361 37 100.0 36 ..................................... ATATAGACTTTAAGGGCAAGCGTGGCAAGGTAGCCG 186434 37 100.0 35 ..................................... TATCCCTTTTGTAATCCGCCAGGCGGCCAGTCCGG 186506 37 100.0 36 ..................................... CGCTTTTTGGCGGACGGAACGGTCATCGCCAATATT 186579 37 100.0 36 ..................................... CTGAAGCGAATAATGCAATAAGCGCAGTACTTCCAA 186652 37 100.0 36 ..................................... TGACTTGTATAAGGAAAAGCAAAACTAAAAGTTTCA 186725 37 100.0 36 ..................................... ATACCCAAGAATATATAGCAAGGAAACTTAATATAA 186798 37 100.0 35 ..................................... CTTCAACATATATCCAATTCTCTTTTTCTCTATTA 186870 37 100.0 34 ..................................... AAAACATCATATCCCGAATAATTTATTGAACCAA 186941 37 100.0 37 ..................................... TGATTATCTTTTCAAAGCCAAACTTAAGGAGGGTAAA 187015 37 100.0 37 ..................................... GAAAAACCTTCTACTTCTTCTGGCGCCGGGACTGCTG 187089 37 100.0 37 ..................................... AACAAATTAGGCAAGCCAGCAGCAGAAGAAACCTCAA 187163 37 100.0 37 ..................................... ATAAGAATGAACTTAATCTCGTATTCCCCGATGAAAA 187237 37 100.0 36 ..................................... TAAGTTGCCGATGCCGTCCTGAAAGCCAGTCAGATC 187310 37 100.0 37 ..................................... ATATATTTCTCGCTGCCATAAACGCGCAGGGCGATCA 187384 37 100.0 36 ..................................... CTTCCACACTTTTTGCTGCCAGCGCACCAATAATAG 187457 37 100.0 36 ..................................... GGTCACTATCCCCAGGGTGGTGGCTACATCTTTGAC 187530 37 100.0 37 ..................................... TTAGGTATGTGCAAGTTGGACCGGCCCTTCAGTTCTT 187604 37 100.0 38 ..................................... CGGCCCTGGAAGCAGCCCAGGATGTCCGGCTGCCCGGC 187679 37 100.0 36 ..................................... GCCGATAAAGGCCGATATGGGTTTGTCCGGGGAAAG 187752 37 100.0 36 ..................................... TGGTACGGGGATGCTGGCCTCTCACCTGGCCCAGAA 187825 37 100.0 37 ..................................... TATCCGTCAGCATTGGGCTGGCGGGATCGGGAATCCG 187899 37 100.0 37 ..................................... CCGCCCCCGGCATTAATATGGACGGAAATAACAAGGG 187973 37 100.0 37 ..................................... ATTTATAACCCTGCTCCACCTTCCACGGTGGCGTTCT 188047 37 100.0 36 ..................................... CGCCAGCAGAAGAATTAAACAGGCTGCGGCTAGAAA 188120 37 100.0 35 ..................................... ACACGCGAAATGAAACGACGTAAACTCGCCTGCTA 188192 37 100.0 37 ..................................... TTCTTTTTGCCCCACCCGAAAAAATCTCAAAAAAATA 188266 37 100.0 37 ..................................... AGCCACATAAAAGACATCAAACGCGGTTATAGCATCG 188340 37 100.0 36 ..................................... CTGGCGAATTGAGAATAGAAATAAATCACGGCTTCA 188413 37 100.0 36 ..................................... GGCATCAGGGCGTCCAGCTCCATCTGCTCATCTAAC 188486 37 100.0 39 ..................................... AAACTATTATCAGCAAACCGGCAGCTATGCTTATGCTGC 188562 37 100.0 35 ..................................... TTGACCCTGGACACGGTTTACCGGACCCTGGCGCG 188634 37 100.0 38 ..................................... TAAAAGAACAACCAGAACGTGGTAGGCAAAGAGAACAA 188709 37 100.0 37 ..................................... TTTTTATGCAGGGTAGGAAAAAATATACCCGGCTAAT 188783 37 100.0 35 ..................................... AACGTTGTGGATATTGGCAATTTCGCCATACCAGT 188855 37 100.0 36 ..................................... CTGGAACGTTCTCCACGAGGATGTATTTCGGTCGTA 188928 37 100.0 38 ..................................... ACGGGGGATAAGCTGAAATCCATGTTGCTAAGCTCATC 189003 37 100.0 36 ..................................... ACAATGATCATGCCGCGATCAACGAGGATTTCTTCA 189076 37 100.0 38 ..................................... GATACTGAAAGGCTAACCGAATTTTGGCTGCAAACTAC 189151 37 100.0 36 ..................................... TACAAAATTTACCGGGGCCAGGTCCTGCCAGTGCTG 189224 37 100.0 37 ..................................... AATCCCCACGCGCTCACGTTTAATTCCCGGCCACGGG 189298 37 100.0 36 ..................................... TACAAAATTTACCGGGGCCAGGTCCTGCCAGTGCTG 189371 37 100.0 35 ..................................... GCGTAGTATGCGACGTGGATTAAATCCACCTTCCT 189443 37 100.0 36 ..................................... TGGCAGGAGTGCAGATAGGTTTACGTGACCTTTACT 189516 37 100.0 35 ..................................... TAGCAATCTGTCGACTGGCCAGCAGCAAGTTATAA 189588 37 100.0 39 ..................................... ACCGACATTTACGGGCAGAAGATACCCACAACTATCGTC 189664 37 100.0 36 ..................................... ACCCTTAACTCTCTCCTGGCCCTCCAGGACTTTGCC 189737 37 100.0 37 ..................................... GTAGACACAACATGGAAAGACATCAGAGGGCCTTTTA 189811 37 100.0 36 ..................................... CTACGATTATAATACCGATAATACGGTCAATGAATT 189884 37 100.0 33 ..................................... GGTCCAGGTTGCATATTTCATCCTCCTTTGGGC 189954 37 100.0 35 ..................................... AAACAGTATCCTTTACCTCCTATGGTATCCTCTCC 190026 37 100.0 35 ..................................... AATCAGTGAGGGAGGTGAGCGATAAGCAATGACAT 190098 37 100.0 36 ..................................... TGCGGCTTAATCACCTCGAACCATCCCCCTGGATAC 190171 37 100.0 35 ..................................... CGAGGCGGGGATCACCGCCATCTTCGACCAGCAAC 190243 37 100.0 37 ..................................... GCCGGATTGGTGCTATGCGCCTATCTCCGCTTCGGCT 190317 37 100.0 35 ..................................... TCTTTTTGCGTAAACAGCACCGAGAGCCCGGCTGC 190389 37 100.0 36 ..................................... ATGATTTAACTGCCACCCTGGAGGCCAGCGGGACTG 190462 37 100.0 36 ..................................... CGCAACATTCCCCCCCACGGGCCGGGCATCTTGTCG 190535 37 100.0 37 ..................................... ACCACCCGGCCGGAAGCAGGATCAACCGCGTGCCAGA 190609 37 100.0 34 ..................................... TAAAATTCATTTTTTAACCTCCCTTTTCTTTAAA 190680 37 100.0 37 ..................................... CCCCGCCCCCGGCCACCCAAAACCAGGGCTTTTTACT 190754 37 100.0 36 ..................................... TATTTGCGGCTTACCTGGTATTCAGACCCGAACCCG 190827 37 100.0 40 ..................................... TGGCCGTAAACAGGGACAAAACCGGCAAATTCCTGCCTGG 190904 37 100.0 38 ..................................... GCCCAAAAAATCATCGAGATGAGCCGAGGCGAGCATCT 190979 37 100.0 39 ..................................... AGTCCGCTTTCTGGATCCCTGTAAACCTGTCCCCATGGC 191055 37 100.0 35 ..................................... CCCCTCATCTACATCATCATCCCAGATGGCCTGGA 191127 37 100.0 36 ..................................... GCGCTACAACAGGACGTATATGGAATTTAGGGATTT 191200 37 100.0 38 ..................................... CCAGTTCAACTTGCTCTCGCGGTCTTTGCTACTACCGA 191275 37 100.0 38 ..................................... ACCAAATCAACCGATTTTAACGGGCGCCCGGGCAGGAT 191350 37 100.0 35 ..................................... TATATCGGCATTAGACCACCGCGCTGCTATTGGCT 191422 37 100.0 37 ..................................... ACGATGGCTGCCGCCGCCGCGTTGGCCGTAGCAATAC 191496 37 100.0 35 ..................................... TTTTTACGCTGCCGCTTACGTTTTGGCGTAACTTC 191568 37 100.0 36 ..................................... CTGATGTGAAGGAGGCTTAGCCATGGACCCTATTTG 191641 37 97.3 35 ...........................A......... CAAAAACTATTTTTCCCGCATACGAATGTTCCTCT 191713 37 100.0 37 ..................................... CGCAAAGGTAGCACCTGAAACCTTCGCCTTTCTTACT 191787 37 97.3 37 ..........................A.......... CAGGATAAGCGCGCCAGGCGCCGAAAGCATTACCGGG 191861 37 100.0 38 ..................................... CCAGTTCAACTTGCTCTCGCGGTCTTTGCTACTACCGA 191936 37 100.0 35 ..................................... GCTTATTGTTGTTTCCGCCTCTTTCTACGATAATT 192008 37 100.0 36 ..................................... TTTTATGGGTGGCGGCAATGGCTTTATCCAAAGACC 192081 37 94.6 35 ........T.............A.............. CATCTTCTTCAGCGTTCCCCGCCGGGGGCGGACAG 192153 37 97.3 35 ........T............................ CAATTTTTCACCTGCGCGCAGGTGGCGGAAGGCTT 192225 37 100.0 38 ..................................... ATTATGTCTGCTCGCGAAGATTACTTTGCTGGTCGCAT 192300 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 171 37 99.9 36 GTGCCAGACCCCATAAATCCCTGGAAGGGATTGAAAC # Left flank : ATTGCTTATGACATCGAAGATGATAAACGCCGGAATAAGGTTTTCAAGACGCTCAAGAATTTTGGTCAATGGATGCAGTTTAGTGTGTTTGAGTGTAATATCACTAAAGAACAGTTTTTTCGCCTCTCACGATCCCTGGAAAAATTAATAGAACCTGAACATGATAGTATAAGATATTATTTTTTATGCGAGACCTGTGTTAAAAAGGTGATCAGGGTGGGAGGGGTAAGGGTTAGGGATGAAAGTATGTTTATTGTTTAGGACAAAAGCAGGATAAATTCATGAAGATGTAGAATTTATGAGTTTAAAAGGTGCCGCGAAATAAAGCTGTAACGAAATACTTAACTCATCCGCGGTACTTAGAAGGCCTTATAAAACAAGGGATGGGAGATTGCTAATGAAAATATGTAAAATAATTTTTTTTGAACCCGATGGATATTGCCTGTATCCGCGGAAAAAGACTATGTAAGCCGCATAGAACCTAGCTTGTAATGCGGGCG # Right flank : CGACACATGCAGCTAGGGTGACTGGTATCCCCACAAGTGCCAGACTGTATTTGTCAACCCAAAATTCCCCCAGATCGTCATTTAAAAATACCCCACATTGAACCAAAAAGCACAAGCTATTTAACTTAATTTTTGCTGCTCCAACCACTCCTTCGTTTCCTTCATGCGATAGGAATTGCCGTTCATATTCACGATATAGGCCTGATGGGTCAGAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCAGACCCCATAAATCCCTGGAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //