Array 1 30498-30800 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEHF01000012.1 Paenibacillus xylanexedens strain DE0070 NODE_12_length_114788_cov_15.023180, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 30498 33 100.0 34 ................................. CTTTATCTTTTTGAAGTTTTTCAGCAATTGCCGA 30565 33 97.0 35 ...................A............. CTGCAAGAGCTCAGCGTTCAGGTCGGACACATCTG 30633 33 97.0 35 ....................T............ AAATTCGTAGCAATCGTAGAGGGAATCCTATTAGC 30701 33 93.9 34 ..............A....A............. TCACCAGCCGCGTCATTATCCGTCCCGATCACGA 30768 33 81.8 0 ....TG...T..T.A............C..... | ========== ====== ====== ====== ================================= =================================== ================== 5 33 93.9 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : CGCTCTGATGATGCAGCCGGATATCCTTCTTTTTGATGAGCCGACTTCGGCTCTCGACCCGGAGCTAACGGGAGAAGTACTTCGCGTCATCAAGCAATTGGCACAGGAAAACATGACGATGATGATTGTCACGCATGAGATGAGCTTTGCTCGCGATGTTGCGGATCGTGTCTTCTTCATGGACAATGGCGAAATTGCCGAGCAAGGCCCGCCAGATCAACTCTTTGGTTCGCCAAAGCTCGCACGTACCCAGACGTTTTTGAAACGGGTGGATATGGAAGAGTAACGGTGGAGCGTGATTTAAAACAGGTGCGAATGCCAAGCTCCCATGAAATCCCTGGGGGATTCGCACCTGACCATAGGCTAATTTGAACCCTTTTGGCAAATTACCTTGAATATTTTAGGTTTTTTATATTAAGATGAAACTGATTAGTAGATGAATTAAACGAGAACACGTAATAAAGTATACAATCTATGCTTTTATTACGTGTTTTTTTGCT # Right flank : TAGGATATGGAACTTTAGATATCATGTCTGATTTTCCCGGCTTCGCTTACACCTAACACGCTAACGATCACACAGGAGCTTATTTTGCGATTTCAGCGACCATTGAAAATCTAACGATCACCACAAGCGCTATTTGGGCTCAAATCCTCAAAATGTAGCGTGAATCGCTGTATTTCAAGTAAATAAGGTTTCTGGTGATCGTTAGAATTTTAAAATGGCTGAAAAGGGTTAAATAGGGTCTCTGGTGATCGTTAGAATTCGGGAAGCCGGAGATCGTCCACAGTAGGGGGAATCTGGTATCTGGTAAACCGGAGATCGCCCATACTAGTGTTCATTTAGAACGAAAGTTTTCCAAAAAAAATATAGGTGGGAGAAACCTCCAGTTCATATACTCTACCCGAGAGACACGCTTCACCATTTTTGATAAAACTTTGAGCCGGTTGGTTCATGCAGTCTTTAGTGTTATAGTTTTGACTGCGGGTGTATTTTACATAACATAT # Questionable array : NO Score: 6.77 # Score Detail : 1:0, 2:3, 3:3, 4:0.70, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 2 35301-35536 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEHF01000012.1 Paenibacillus xylanexedens strain DE0070 NODE_12_length_114788_cov_15.023180, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 35301 33 100.0 35 ................................. TCCCGGGTCCTTTTGTCATTGAGGTGACGATATGA 35369 33 100.0 35 ................................. CTTTTCCATATTCTCAGCTGCAGCTACGCTTGGTA 35437 32 87.9 35 ..A..................A......-..G. ACGAAGAATCTCGGCAATTTCCAAATTGTGAAAGT 35504 33 90.9 0 ...A................T.......A.... | ========== ====== ====== ====== ================================= =================================== ================== 4 33 94.7 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : AAATGGTGAAGCTGGTTGAAGCACAGGTTGAAGCAAGTTGAAACAATTATGACTGGTTTTTAAAAGGATGAACCTAACCTTTCGATTGACCAGTTTACCATTTTGGTCAGTTGGTCGTTATTTAATGTAGCACTTGTGTATGAGGATGGATGTGATCTATGTCATAGTTTGGAAAGTGAACGTTGTGATGGTGGGGTGGGGAGAAGTTGGAGGAGTAGGGAAAGGGGGAGACTTGAAAAGGATAGTAGGAGTGGGAGGTACATAGAAACGTAGGAAGATTAAGTAGAGAGTAGAAAGTGATTTATGCGGTGTGAATGTGAAGCTCACATGAAAACCCCGGGGGATTCGCACCTTGAAAGTAGTGAAAACAGGGCATTTTGATACCTTTTGGCATCATTGAGCTGGAAAAAGATTGAATTCGTTGGCGGGAACACATAGAATAGTAGTGTAAAAACGTAGTTTTGTGACGTATAGGTATGTACTATACGTGTTTTTTCGCT # Right flank : TCATAGAGGGTAGTCGGTATCAAAATGAGCAATCGGCTACTCACTCTGAGCAATCAATCGGAATTTGATAAAAGATCCAAAACTAACGACAAGGTAAAAGTATTCCCTCATTGGTTAGCTGCTACCATTGTTCACAAGCAATTTGAAGTGGATCAAGATGATGCGCGTACCGATGAAGCTAGACGTGAAGAGGAGAGATTTCAACGGAGATTAAGCGTTACAAAAATATTAGTCAGCAGAAAGCTCAACTCAATTTCCTCTAGTATAATTAAACTGGTTAGTCATGCTACCAATAGATTCGGAGTTTCGAAGATTAGAAGTTTGGAAGATGTTATCCATATATCAACCGATGAGGAGTGTCAGGACATGTCCATACATCACATAGGTCACAAGGTTACTTTTGCCGATATCAAAACGAGGTTGCCTCACGAGAGCTGGATGTATACACAGAATGAAGCACATGATGGTGAATTTGATGCCGAGGAAGTATGGCTGCATTC # Questionable array : NO Score: 8.60 # Score Detail : 1:0, 2:3, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 1 358273-358580 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEHF01000004.1 Paenibacillus xylanexedens strain DE0070 NODE_4_length_522173_cov_16.644079, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 358273 33 100.0 35 ................................. TTTTATGTCGTCTTCGTATGACAGGTAAAACACAT 358341 33 100.0 35 ................................. ATAACGTTGGCCGGACGCCGGTTAAACGCGGTACC 358409 33 97.0 36 ..........C...................... ACGCTCTGCTTTCTTTCGGGCGGCAAACTCCGAGAA 358478 33 100.0 35 ................................. TTCGTATCATCTTGATATACATCATAGTACGTAGT 358546 33 81.8 0 ............GG.....AT..AC........ | T,A [358564,358570] ========== ====== ====== ====== ================================= ==================================== ================== 5 33 95.8 36 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : GTTAGTTAGTGGCGTGGCTGTATCGCTTTAGAAGTTCTAACGATCTCACAGAACCTTATTTTGCGCTTTTTGCGGTGTGTACAAATCTAACGATCACCAGAAGCGCTATTTGTGCGAAAACCTGCAAAACTGGGCTAAAAACGTGGCTTTTCAAGTAAATAAGCTCCCTGGTGATCGTTAGAATTTCAAAGTAATCAAAAAGGGGCAAATAGCGTCGCTGGTGATCGTTAGAATTCGTGGAGTCCCATTTGGCACTTGATGATTGTTTGATGTATGAATGTAGTGTGTTTACTGAAGGAGATTTCGTGGTGCGAACCCCAAGCTCACATGATTTCCCTGGGAGATTCGCACCAGTATTCTGATGTTTTCGTGACCTTTTGGCAACAGTTTGTGATCAAATTGGAGTGTTTTTGAAGTCAATGGTAAGGTTGATTGATATAATATGAAGAAGATACGTCATGCGAATTAGATGTTACAACTTTACTACGTCTTTTTTCGCT # Right flank : TCGTATCCAGCCACTGGATCTCATTCTTAGTTGCATGTACCATTTCCCCTAAGGGAGCACGTAGAATAAGGTATGTTACAGTACTATGAATGCCAGCATTTCTATCAGATAGAATGAAGTGAGCTCTATGCGATGTAATGGGGTTATGGAGTATATTTTTGATAATGAGTAAATTCAATCAAGTGTTGCAGATGTTTTTGATCCCGATGCCCTTCACTATCATCAATTTCAGTTCATATCTAAAAGGGAGCTCCCCTAACATCGTTCAATTCGTAGCGACTTTGTTATTCCTTCTTGTATGGTTTGCTCTAGGCATGAAGAGCAGGGGGAACGAGTTTGTACTGCGATCCACGCTGTTTTGGTTAACGGGGGCGGTCTTGCTTCTTGTTGGGTTTTATCTGGACTTAGCCATACTCTTTATACCTGCGTCCATCGTTTGGGCGGGGCCTGCTTATGGAATCAGGTACGTTCTAAATCTTCCGTCGGATGTGATGTTCGCC # Questionable array : NO Score: 8.85 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA //