Array 1 1815336-1817135 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063773.1 Pectobacterium carotovorum subsp. carotovorum PCCS1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1815336 29 96.6 32 ..........T.................. TTTTCTTTCATCGTTAACGCTTCATCACGCGT 1815397 29 100.0 32 ............................. GGTAACGCCTGATTCAACAACCTCAAATCTTC 1815458 29 100.0 32 ............................. GCGTGCAATTTATTACTATTGGCACCACTACA 1815519 29 100.0 32 ............................. TCAATTAGCAAGGTTCAGCTTAAATTATACTC 1815580 29 100.0 32 ............................. AGAAATTCACGGTTGGCGGTGTTTCGATGGCG 1815641 29 100.0 32 ............................. TTTGCCCACCTATCGCACGATTGTAGAATGTC 1815702 29 100.0 32 ............................. AATACTTTTAGGAGCTACTGAGCATATCGATT 1815763 29 100.0 32 ............................. CAGGCCTGAGCACGTTGGCCTGATTATCGGCG 1815824 29 100.0 32 ............................. CGACACTCTTGCGATAGTTAATACCGTTGGCT 1815885 29 100.0 32 ............................. CCGATAAACTCCCTCATCTGTGTGCACTTCGC 1815946 29 100.0 32 ............................. AGCCTACACTCCAAAATGTGCTTTCAGACGAT 1816007 29 100.0 32 ............................. GATCGAGAACAACCCCGCCAGGTGGCGTTACA 1816068 29 100.0 32 ............................. GTCGGGAGCGTAGCGATTTCCTTCAACAAAGC 1816129 29 100.0 32 ............................. CAGCACGATAAATGCTGGTGGCCAGCAGCAAC 1816190 29 100.0 32 ............................. GCCCATACCAGTAGGTTTTCCCCCGGAAGCAC 1816251 29 100.0 32 ............................. ACGAGCATACGGGCTATTGGGAAGAACCTGAC 1816312 29 100.0 32 ............................. TGCCATGTCGTGTTGAGGGTAGTAACCCGCTG 1816373 29 96.6 33 ............................A GCTGATTTCGTATTAATTACTGGTGAACTGTCA 1816435 29 96.6 32 ..A.......................... GACATTTACAATAACGGGGTCTTTATTTGGTC 1816496 29 100.0 32 ............................. CGCCCCAAATGCCGGAACGCCAGCAGCGTGAT 1816557 29 100.0 32 ............................. TCCAGCATCTGTTTCTGAGGTCATGAAGAAGA 1816618 29 100.0 32 ............................. ACTTCCAGCAGACGGACGGGACGTGGAATAAA 1816679 29 100.0 32 ............................. GACGGCACGGTCACGTCAACGTGGCATGAATA 1816740 29 100.0 32 ............................. CCTCGCGCAATGGTTGAAGTGAATATGGCTGC 1816801 29 96.6 32 ..A.......................... GGCAATTAATATCGCAGGGCTGAATCTTACTA 1816862 29 100.0 32 ............................. GACGAAAACTACCACTGGATCGCCATAGTAGA 1816923 29 89.7 32 ..A.........T..........G..... TAGGGCATAACAGAGGCACTAAAGATGCTGCT 1816984 29 93.1 33 .............G.A............. TGGCACCCCACGGGATGCCTATATCTGCACAAC 1817046 29 96.6 32 ............T................ TCCTATATAGACACGACAGCGGCCAGCACGCT 1817107 29 93.1 0 .............T..............C | ========== ====== ====== ====== ============================= ================================= ================== 30 29 98.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTGATTGAAGAGGTGTTGTCTGCGGGTGGAATTACGCCTCCGCTACCGCCGGATGATGCACAGCCGCCTGCGATCCCTGAACCGAAACCGTTTGGCGACAGCGGCCACCGGGGGCAGGGTTAAATGAGTATGCTGGTGGTTGTGACGGAGAATGTCCCACTGCGTTTACGTGGCAGATTGGCGGTGTGGTTACTGGAAGTCCGTGCGGGAGTGTATGTCGGTGATACTTCACAGCGGGTGAGGGAGATGGTCTGGCAGCAGATTATTGAACTGGCGGAGCAGGGCAACGTTGTGATGGCGTGGGCGACCAATACGGAGTCTGGTTTTGAGTTCCAAACGTGGGGAGAAAACCGCCGAATGCCGGTAGATCTGGACGGTCTGCGGTTAGTCTCTTTTTCACCTATTGAAAATCAATAAGTTAGCGATCTTTAACAACATGGAAAAATCGGTAGAATTTTTATGCCGAAAAAAGTGTTATAAAACAACTCTCTACTTTTAGA # Right flank : CTAGTCCGTGGAAGCGGCTAAAGGATTAGCTGTTCTGGTTCGCAGTGGTACAGCTTAGCCAGTTTTTCTCGGGTGCGTTTCTGCGGCCTTGAATCTGGGGATTCAAGCTGAGAGACGGCTGCTTGGGTCATGCCAAGCGCGGTTGCAACTTCTTGCTGAGAAAAGCCTCTGAAAATTCTCCAGGCTGCCTGTAAGCTGACGTCTTGATCAATGTGGATGCTAACCACTTCGTGAGGAATAGAGACGTCATCCTCTGCGCCATGATCGTAGGGAATGCTCTCATAGAGGGCGGGATCGTCAGCATTTTCAATAAGTTTCTGATATAACTCATACGGAACAACAGCATATTCAGGTTTACCGCTTTTATCCCGAATGACTTGTATGCTCATAGTGTATTGCTCCAACATTTTCTTTCGATGGGTGAAAATCAGATGTGGTGTAAAGAAGGATGCGCTTTCCTTCTTAGTATGTCGTCGTTGTCCTACGCTTGACTTCAAGTA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //