Array 1 93501-95848 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCNS010000005.1 Bifidobacterium longum strain DFI.2.45 BGECGLNE_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 93501 36 100.0 28 .................................... GATTGCATGGAGCCTAGCCAATGTTCTT 93565 36 100.0 28 .................................... TAGCGGACGACCTCTTCCATTCGTTCTT 93629 36 100.0 28 .................................... TGACGAGTTCCGATTTGCATTTCGTCAA 93693 36 100.0 28 .................................... CGCCGAACAATCTTATTCAGCACTGATT 93757 36 100.0 28 .................................... AGCATCGAAACCGGGCGTATGCAACACA 93821 36 100.0 28 .................................... TAGTCTTTGGTCAGGATGTCGTATCCGA 93885 36 100.0 28 .................................... AACCTGTTGGCCTGGTCCCAGTCGCTCG 93949 36 100.0 29 .................................... ATCTATATAAGACACGCCTATCATATAGC 94014 36 100.0 28 .................................... CGTTACGGGTATTTTATCCAGCGTTTCA 94078 36 100.0 28 .................................... GCCTCATGATGAAGAGTCGCAAATCATC 94142 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 94207 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 94271 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 94335 36 100.0 28 .................................... GTTGTAATCGGTCATAATAGTTTTCAAT 94399 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 94463 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 94527 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 94591 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 94655 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 94719 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 94783 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 94848 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 94912 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 94976 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 95041 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 95105 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 95169 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 95233 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 95298 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 95363 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 95428 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 95492 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 95557 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 95621 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 95685 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 95749 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 95813 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 37 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : TGCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCTTTAAACCTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //