Array 1 263240-262283 **** Predicted by CRISPRDetect 2.4 *** >NC_008148.1 Rubrobacter xylanophilus DSM 9941, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 263239 30 100.0 37 .............................. CTCTCTCTCGTTCTCATGCTCCTTGAGCCTCTTTATG 263172 30 100.0 35 .............................. GTCTCGCGAAAGTCGTAGGCCTTCGCGACGCCCGA 263107 30 100.0 35 .............................. GTCTCGCGAAAGTCGTAGGCCTTCGCGACGCCCGA 263042 30 100.0 37 .............................. CGCCTGGTGTTGTAGCCACCGGCCTTCAGGGCCTCCG 262975 30 100.0 37 .............................. CTGAAAAACAGTGCCCCCGAGCCGAAAAACGGCTCGA 262908 30 100.0 35 .............................. CGGTAGAACTTTATCTGGCCCGGAAGCGGAAGGAG 262843 30 100.0 35 .............................. CGGCGGGATGCGGCGTACGCGAGGGCAGCTACCGG 262778 30 100.0 36 .............................. AGGGAGGCGCTCATGTAGGGCCTACGCCCCTGGGAG 262712 30 100.0 38 .............................. AGGGAGCACTCCTTCGAGGCCCTGCGAGACCGCTACGA 262644 30 100.0 37 .............................. TCGTCCCAGGGGGGAAGATCCATGAGGGGGGAGGCCC 262577 30 100.0 37 .............................. ACACCGGCCTATCGCCCCGCTACACTGTGACCAGCCT 262510 30 100.0 37 .............................. CATACTGTAGGCAACAAGTAGGGTACGCTTCGAACCC 262443 30 100.0 35 .............................. ACCTCTCGGACGTGACGCCGGAGGTGCGCAAGGAA 262378 30 100.0 36 .............................. GACCAGGAGTGCAGGAGAGCGTACACGTGGCACGCT 262312 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 15 30 100.0 36 GTTTTGAGCCTACCTATAAGGGATTGAAAC # Left flank : GAGCTCTACAAGCTGGAGAAGCACCTTATGGGAGACGAGCCCTACGAGCCCTTCGTGAGCCGGTGGTAAGGGTTGTACGTGATCATGGTCTACGACGTGAACGTCAAGCGGGTGGTCAAGGTGCTCAAGGTCGGCCGGAAGTACCTCGAGCACGTCCAGAACTCCGTGCTTGAGGGGGAGCTGAGCCCCGCCCAGTACAAGAAGCTCAAGCACGAGGTGGAGAAGACGATAGACCCCGAGGAGGATACCGTACGCTTCTACCTACTTCGCACCACGAGATACCTCACCACCGAGGAGCTCGGCCTGCCCTCACGCAATGAGCCGGATAGCAGCTTCCTGTAGCTGCGTCGACCTCCGGTAGCGTATCACCCCAGGGGGTTCGACAACAGAGGATCTGGCTTTACAAAGCGCTTTGCTCTATAATGGCTTCGAGTGAGAGCCGCTTTGCGAAGGGAGGGATCTCAGAAGAATTAGCTGCAAAAGGGGATATTCGAGGTTGG # Right flank : CACTCGTCGACCCGGCCCCGGGCGAGGGCCTGAGAGATCAAAGGTTCTTACGCAAGGTGCGATCCGCTGGATGCGCGTTACACCCGGATCACGACCTTGCCGAAGTGCCTGCCGCTCTGCAGATGCTCGTAGGCCTGCCGGGCCTCCTCGAACGCGAACACCCGGTCGATGACCGGGCGCAGGCGGGCGCGCTCTATGTCCCGCAGCATATCCTCGAAGTGGCGCAGGCTCCCGACGTACACGGAGTCGACCCGGACGCCGCGCTCGTTCTTTGCCGCCTCCTCCAAATCAGCGCGCTCGCCGGAGAGCAGCCCGACGAGCGTGAGGTGTCCCCCGTCGCGGACGGCGCGCAGCGACCTGGGAAGCGTCCCCGCTCCCCCCACCTCGAGGATGTGGTCGACGCCGCGGCCGCCCGTGAGCTCGCGGGCGCGCAGGTCCCAGTCCGGGGTCTCTCTGTAGTTGATCGTCTCGTCCGCCCCGAGCTCCCTGCCGCGCTCCAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAGCCTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 2 2302886-2300783 **** Predicted by CRISPRDetect 2.4 *** >NC_008148.1 Rubrobacter xylanophilus DSM 9941, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2302885 30 100.0 37 .............................. TACTCGATGCTGAGGAGATTATGCCCCTGTGGAAAAA 2302818 30 100.0 37 .............................. CGCGCTGATGCGCTCCTACGCCTGGTCCGACCCGGAG 2302751 30 100.0 36 .............................. CGAAAGAGCGGGGCGTCCTACGGCGGCATAAGCTTC 2302685 30 100.0 39 .............................. ACCCGTAGACCCAAATCCCAACGACGACGGCGTCCATAT 2302616 30 100.0 37 .............................. CATGCCATGCAACAAGTAGGGTACGCTTCGAACCCTA 2302549 30 100.0 36 .............................. AGGAGGCTCCAGACCTCCTCCGGCGAGGGAGCCTCC 2302483 30 100.0 36 .............................. CTTCAGGGTGGTGGGGCTACAGGAGCCCCACCGCCC 2302417 30 100.0 36 .............................. CTCTTTCTCACTTCCCTCTCCGGTCCGCCCTCGAGA 2302351 30 100.0 36 .............................. TAGCGCCTGGCGGCAAGCTCCCGGACGAGCTCCCGG 2302285 30 100.0 36 .............................. CCGCAAGGCCCGCCCTGTACGTCCACGCCCCAGACT 2302219 30 100.0 37 .............................. CTCGGAGGAGCTGGAGCGCTTCTCCCGCGGGGTGGCA 2302152 30 100.0 37 .............................. ATAATTGGCATTCCGGGGACTGATGACGAGGCGGCCC 2302085 30 100.0 37 .............................. TGCGTTCGAGCCTCCAGTCGTCTTCGCAGACTGGAGG 2302018 30 100.0 37 .............................. CCTTGCTGCCCTCTTCCAGCTGCCTGCGCGCCTCCTC 2301951 30 100.0 37 .............................. CGATCCTGGGGGACCGGCCCCCCGGAAGGGGGGCCTC 2301884 30 100.0 36 .............................. ACCTCCACCGGGTCATGGTGGGACACCACAAAGTCC 2301818 30 100.0 36 .............................. CCGTCCTCCTGCGGGCGGGCGAGGAGGGGCTAGCCC 2301752 30 100.0 37 .............................. GTGGATAGACTCCCAGAGGGTGGACTACCAGTTTGTC 2301685 30 100.0 37 .............................. GTAGGGCGGATCCCGCAGCTGGAGGCCGCCCATGAGG 2301618 30 100.0 37 .............................. TCCAACTCCCCCCTCCTCAGCATATCTATCCGGGAGC 2301551 30 100.0 39 .............................. TTCCATGGCTTTGAAGCCAGCTGGTAGTCGCCCACGTGG 2301482 30 100.0 36 .............................. TACCGGCGTTTTGCGAGCATCCGGCAGGCTCGGCCC 2301416 30 100.0 37 .............................. TGGCGCGAGTCAGCGGAGAAGCGGTAGCCGGGGATGT 2301349 30 100.0 35 .............................. GGGTTCTCGCGGCCAAGGTAGCCCTCGATCACTAC 2301284 30 100.0 37 .............................. AGGCATGAGAGCGGCCTCCATTGGGGGGAGCTCTCAC 2301217 30 100.0 37 .............................. GAAGGCGCACGCCCGAAGATATCCTCGAAATTGCGCC 2301150 30 100.0 38 .............................. CCCTATCTACCAGCGGGTTCTTGCCCGCGAGCTTCGCG 2301082 30 100.0 39 .............................. ACAACACGTACTCCGCCGCCCATCCGCACCGCGGCGTCC 2301013 30 100.0 36 .............................. AAGTCCTCTTCCTCCTCCTTCTTCCTCTGCGGCCGC 2300947 30 100.0 37 .............................. CAGGCCGCCCAGGCTCCCGACGTGACCGGTGATGATG 2300880 30 100.0 38 .............................. GCCGAGGAGCAGTACCGGGAAGACTACGGCTCGCCCTA 2300812 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 32 30 100.0 37 GTTTTGAGCCTACCTATAAGGGATTGAAAC # Left flank : CCTGCGATCAGCAACAGATCGGATCGGCTTTTCTCCGGAGGCTCAACTCGGGAGACGAGACCCCGGGAGAGGTGGACTACACGGTTATCGCTACCCGCACCGACGCCGTGGTGGTCCCCTACACGTCTGGCTTCCTCTCCGGACCTCCCCGGCAACTGACCAACGTGTTACTGCAGGACCGCTATCCCTACGATCCCTCGGGGCACCTGGGGATCGTCTTCGATGCCAACGCGTACCGCGTCGTGCTCGATGCTCTGGAACGCGAGGGGCCTGCGAGGCCGTAGCGGCGATCGGCGTCTCCTTTCGGCCTCTTCTGGGATGGGGAGGCATCGGTTCCCGCACGGCGCGTCGACCTCCGGTAGCGCATCACCCCCGGGGGTTCGACGACAGGGGATCTGGCTTTACAAAGCGCTTTGCTCTATAATGGCTTCGAGTGAGAGCCGCTTTGCGAAGGGAGGGATCTCAGAAGAATTAGCTGCAAAAGGGGATATTCGAGGTTG # Right flank : AAATTTCCAGTTTTCAACGGTTGCGTCCATAAACTTCTGTAAATTGGTGGCCCGCTAGAAAAGAGGGGCCATCATCCTCCAAGATGGTTGGTGTCTGAAGTCAACCTATCGGAAACAGAGTAACGATGGCCACAGATCATCGTAGGGTGGACGCACAGCTGGCGCAAGAGGTCTTGCTGGACGACCCGGACTTCTTGCGCGAGATCGTAGAGAGGGTGCTCCAGGAGGAGCTGTTGGAAGCGGAGATGACCGAGCACATCGGCGCCGCCCCCTACGAGCGCGGCGAGAACCGCACCGCCACCGCAACGGCCACAGGCCGAGGGCTTTGCGCACCAGGGTGGGCACGCTGAACCTGCTCGTCCCGCAAGACCGGGAAGGGACCTTCTCCAGCCGGCTCTTTTCCCGTTACCAGAGGAACGAGAAGGCGCTTGTTTTGGCCTTGATGGAGATGTACGTGGATGGGGTCTCCACCAGGAAGGTCAAGGACATAACCGAGGAAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAGCCTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //