Array 1 24146-15643 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVMP01000034.1 Dysgonomonas sp. 520 scaffold34_size31135, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 24145 47 100.0 30 ............................................... TTGTTCGGATACGACTACCGGCATGGTTAC 24068 47 100.0 30 ............................................... CCTTATGATGCTGACAAAGTGCAAGCCCCA 23991 47 100.0 30 ............................................... ATCAGGAGATAATATTTCTAAAACAATGGT 23914 47 100.0 30 ............................................... CAACTCCTTTCGACTTTGCGTATTCGGGAG 23837 47 100.0 30 ............................................... GGCAGACCTATCATTACACATCTGAGTAAC 23760 47 100.0 30 ............................................... AGGAGGCTATTTCCTTTCTTGCCCCAGAGC 23683 47 100.0 30 ............................................... TGAAAACAAGGATGATATTTTAAAGGCTAT 23606 47 100.0 30 ............................................... AAGAGGCGCTATCGGTTATCGAAAAGGGTA 23529 47 100.0 30 ............................................... GAGTGTAAGCCTTTTTCTTCTACTAACGCT 23452 47 100.0 30 ............................................... ACTTTAAACCAGGAACATACAGATCACCTT 23375 47 100.0 30 ............................................... ATGAAACAATTAAGTTAGAAAATGGAGAAT 23298 47 100.0 30 ............................................... CTTTGGATGAGCAGTTGGAGCAGTTCAAGG 23221 47 100.0 30 ............................................... ATCCCAAGTGTCTAATCTTCTGGCTACATC 23144 47 100.0 30 ............................................... GCGAACCTATGACGTTTATTCCGATATTTT 23067 47 100.0 30 ............................................... TGAAAACAAGGATGATATTTTAAAGGCTAT 22990 47 100.0 30 ............................................... AGGGTCATTAATAGCCTTTAGTAGCATTAT 22913 47 100.0 30 ............................................... AAACATCATAATCAGGTCCAAATACTTGAC 22836 47 100.0 30 ............................................... CCTGATGGGTCGGTTGGATGCAAACGAAAT 22759 47 100.0 30 ............................................... AGTAATAGGAGTAGCATTGGCTATCAATTT 22682 47 100.0 30 ............................................... CAAGCGTGTATGTGTTCTTCCATCTATCCC 22605 47 100.0 30 ............................................... AATAGACAATTCAGATGAATATTACCGTCT 22528 47 100.0 30 ............................................... AAGCCTTACATCGCTTGCTCTGGAATATGG 22451 47 100.0 30 ............................................... TTCGTGAGTGGATTAAGCCGGTATTATTGG 22374 47 100.0 30 ............................................... GGGAATAGCGACGGCAATAGGCGCTGTTCA 22297 47 100.0 30 ............................................... TAGATGGTTTAGTGGCATAAATTTTCAGTC 22220 47 100.0 29 ............................................... TCTTTTTGCAATATCCTACATTATTGTTT 22144 47 100.0 30 ............................................... ATATACAATATGCTTTATTTTATCCAGTTC 22067 47 100.0 29 ............................................... AAAAACATGGACACTTGCTCAAATTGAGC 21991 47 100.0 30 ............................................... AATATAAAATTATGATAAACCATAAAAGTA 21914 47 100.0 30 ............................................... AGTAATGGATATCTATTATCTATTGGAAGA 21837 47 100.0 30 ............................................... AACAATTAATGTAACGAATATCATTAAAAC 21760 47 100.0 30 ............................................... ACCTAGTGAGCTAGATATAGCCTCGTAACC 21683 47 100.0 30 ............................................... TCAAAAATGTATGCAATAGCGGTGAATATT 21606 47 100.0 30 ............................................... CAGAGTCGGTTAAATGGCTGAGTGAAAATG 21529 47 100.0 30 ............................................... ACAGATTGCACCCTTTAATATTTCGGGTAT 21452 47 100.0 30 ............................................... TAACATCTTCATTTAAATCTTCCTCTTTAT 21375 47 100.0 30 ............................................... GGAATTGGGCACATTGATACATCAATCATT 21298 47 100.0 30 ............................................... ACAACGGGTTGCGAGGCTCACAGTTCAACA 21221 47 100.0 30 ............................................... GGATTATCGCTCTTTATTCGTTCCATAACT 21144 47 100.0 29 ............................................... TTATGAAACAAGACCCTGAAAGCCTATCG 21068 47 100.0 30 ............................................... CGTCAATGTTATGGTCGAATCAGCTTTTGC 20991 47 100.0 30 ............................................... ACATTCGCTCTGTTTCATTTGGGCGGGAAA 20914 47 100.0 30 ............................................... AGTTGTATTCGCATTCAGGTAAATCATTTG 20837 47 100.0 30 ............................................... ATACCATTTGCCATTATTATAGTCATATCT 20760 47 100.0 30 ............................................... GAAGGATGAAGCGTATATCCAGTCTTTCAG 20683 47 100.0 29 ............................................... AATCTCTCATTGATTACATTACAAATATA 20607 47 100.0 30 ............................................... AGATTTTCCTTGCGAGCTGCTTCATTATAC 20530 47 100.0 30 ............................................... ACCATACGTAATCAAATCCGAACGAAAACT 20453 47 100.0 30 ............................................... ATTATCAAACAAAATGATAACGCAAGGTAA 20376 47 100.0 30 ............................................... GGAATTGGGCACATTGATACATCAATCATT 20299 47 100.0 30 ............................................... AGATTCTTTCTTTGGCTTCATTGAACATAA 20222 47 100.0 29 ............................................... AGATCATATGTGCTTAGATCACCCTCTGT 20146 47 100.0 30 ............................................... AAATATTCGCTGTTGGCTCATCATATTCAA 20069 47 100.0 30 ............................................... AGATTCTTTCTTTGGCTTCATTGAACATAA 19992 47 100.0 29 ............................................... AGATCATATGTGCTTAGATCACCCTCTGT 19916 47 100.0 30 ............................................... AAATATTCGCTGTTGGCTCATCATATTCAA 19839 47 100.0 30 ............................................... AGATTCTTTCTTTGGCTTCATTGAACATAA 19762 47 100.0 29 ............................................... AGATCATATGTGCTTAGATCACCCTCTGT 19686 47 100.0 30 ............................................... AAATATTCGCTGTTGGCTCATCATATTCAA 19609 47 100.0 30 ............................................... CATTAGCTATCCATATATCTTCCGTACGCC 19532 47 100.0 30 ............................................... AGATATCAAGGTGTAATCCCCAGTACTGTT 19455 47 100.0 30 ............................................... TGCTGGTCAAGGTTTTGTTGACAAAGGTTT 19378 47 100.0 30 ............................................... TAAAAACACAATATAAGAATTTGCAATTAG 19301 47 100.0 30 ............................................... CTATTTTAAATTCATTAAATTTTGGATTAC 19224 47 100.0 29 ............................................... TATATCAAATACAAACAAAGGGGGTGCAC 19148 47 100.0 30 ............................................... GGAATCTAAACTTATCAAATATAAAGAATT 19071 47 100.0 29 ............................................... TAATGGAGGTATCTTAAAGTTCGCCCAGA 18995 47 100.0 30 ............................................... AACACACCTTCATCAAACCAATACCATGTA 18918 47 100.0 30 ............................................... GCGACTACCTGAGGTAAATCTACAAGTGTT 18841 47 100.0 29 ............................................... TCAATTATCGCTTGCTGTGAAGATTCTAT 18765 47 100.0 30 ............................................... CGGATATGGCATACAATCAACGCAATTTAT 18688 47 100.0 30 ............................................... CAAATCCATCAGCTTTGGATGAATCCATAG 18611 47 100.0 30 ............................................... CGGACGTATGCAGTTAATAAGTGTTAAACG 18534 47 100.0 29 ............................................... AGTTTAGTGATTGGAATAATGTTTATTGG 18458 47 100.0 30 ............................................... AGTGGGTTATTCACCCACTTTATATCTTTA 18381 47 100.0 30 ............................................... ATATTGATGCAGATGGTAAATTTGCAGGTA 18304 47 100.0 30 ............................................... ACCTTCTGTGTCACCGATAACAACAGTAGA 18227 47 100.0 30 ............................................... ACTATGTTATCAATAATGATGATAGTTATT 18150 47 100.0 30 ............................................... TGCAAGTTACAGCGAAATTGGACGGTACCA 18073 47 100.0 30 ............................................... AGGCGGTAACCGGAAGTTTGACTGGGAACT 17996 47 100.0 30 ............................................... GAAGATAGATATAATGGACTATCCAAGATA 17919 47 100.0 30 ............................................... GTTTCAACCTTCAACAAACAAAATATTGCA 17842 47 100.0 30 ............................................... TTAATTTATTAAATTCAAAATTTTCAAGTT 17765 47 100.0 29 ............................................... TGGAATTTAACAAAGATGTTATTATTGAA 17689 47 100.0 30 ............................................... TTGGTTTTATTCCTGAAAATCTACGAAGTT 17612 47 100.0 30 ............................................... AGATGTTTGGACTAATAACTTTATGTTATT 17535 47 100.0 30 ............................................... TGTATGGCATAACCACCCCAAGTGCCTAAA 17458 47 100.0 29 ............................................... TCTTAGCCATTACCTTGTGAGTTTAATGC 17382 47 100.0 30 ............................................... AAGATAGGATAAAGGACACTATCGAGGACG 17305 47 100.0 30 ............................................... GACAATGAACGCACCGCATGATTGTTAATT 17228 47 100.0 30 ............................................... TGATAGTGTATTATAGTTGAAATCTTGATT 17151 47 100.0 30 ............................................... CAGTAGGGGAGCATACTCCAATGTCAACAA 17074 47 100.0 30 ............................................... ATTTGAAAAAACACCATATTTTGATTCTCA 16997 47 100.0 30 ............................................... AGACTCCAATCCTCCAATTCTATCAGTTTC 16920 47 100.0 30 ............................................... TATGCTGATGTTATACAGAATTTTAAAGAA 16843 47 100.0 30 ............................................... CAGGATCAGCCATCACTTTCATAATGAGTT 16766 47 100.0 30 ............................................... TCCGATTGGAAAGGGCGCTACCTCTTTTAT 16689 47 100.0 30 ............................................... ATGACCTCCTCCATCATTAGGCTGCTAATC 16612 47 100.0 30 ............................................... GGCGGAACTTGCGACGTTTGGTCGTGCCCG 16535 47 100.0 30 ............................................... AGGCACAAGAATGTGCATTAACTGGATTGA 16458 47 100.0 30 ............................................... ATTATTTTTATAATAAATTTCAAAATTTCT 16381 47 100.0 30 ............................................... ACATCGCAATCTTGTGCAAGTTCTCCGCGA 16304 47 100.0 30 ............................................... GCAGTCTTTAAGCGCGATTTAAGGAATTAC 16227 47 100.0 30 ............................................... ACTCGCCGCTAAAGAATCCATGAGGTTTTT 16150 47 100.0 30 ............................................... GTCGCGGGCTATTTTTAAGAGGCGTTTATA 16073 47 100.0 30 ............................................... ATATAAGTGTAAAAATGGAATCGAAATACA 15996 47 100.0 30 ............................................... CCGTATGCGTATTGTAGCCTCTTTTATCGC 15919 47 100.0 30 ............................................... CAACTGCTTTGCTTTGGTTGCCATATCTAT 15842 47 100.0 30 ............................................... TCAAGATTACAGACCTCAGAGCTGAAAGGT 15765 47 100.0 29 ............................................... CAAGAAGAGTTTATGAAATTGTAAAGGGG 15689 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 111 47 100.0 30 ACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAAC # Left flank : AGGTAAATTGCGGAAAATAAAATATCCTGAATTTGTATTGTAACATTTTGTTATGAAACAGGACAGATTAAATCAATATCGAATTATGTGGGTTTTAGTACTGTTCGATCTTCCTACCGAAACAAAAAAGGACCGGAAGGTCTATGCCAATTTTCGTAAAAATCTGCAAAAGGATGGGTTCACGATGTTTCAGTTTTCAATCTATCTTCGTCATTGCATGAGTATGGAAAACGCAAATGTTCATATCAAACGGGTTAAAAAATTTCTACCCGAAAAAGGGCATGTCGGAATAATGTGTATAACAGATAAACAATTCGGGATGATGGAATTATTTTATGGAAAAAGTGCAGAAGCCAAGAAAACGGAAGGACAACAACTAGAACTTTTTTAAGAATAAGAAATCCCGACCTTGATCGGGATTTTTATTTGAAATACATCATTTTTTGAAATCCTAATGAGTCGCGATAATTATTGAATATCAGTATATTATATACACCTAT # Right flank : ACAGCGTATACAGTGCAAATTGGCACTCCAAAAAGAGACTTACTTTTTCTTTTTTTTGTTTTTCGCAATCTTTTCTTCAACCTTCTTTTTCACTTTAGAGTCAGTTGCCAAATTCATTATTCTGTCATAGTCCGATTGTGTAGAAGATTTATTTAATCGATCAGCATATGTCAACGCCAATTTGTCGGCCATCTCGGCATAATGTCTACTTTCCGGATATTGTTCTACAAAGCTAAGCCAATCTTTCTCGTTTTTCGACTTTTTTATCTTGTCATACTTTATTTCTGCCTGACAGTCTTTATAGATTACCTCCGCATCTTTCAACAATGGTACATATTTTTTTATTTCATCATATTGTGCTATTGCACTTTTGTAGTTCTTTTTTTCATAGTGAAGCTTACTCAAATCATAATATTTCTTATACCTCACTTGACGTATCATTAATATGCCTTCGCCAATATATTGTTTACAGTCCGTCTCAGAAACGGAGGTTGTATACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //