Array 1 16281-23895 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKHP01000010.1 Corynebacterium coyleae strain UMB0989 .21837_8_48.10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================================== ================== 16281 27 75.0 114 A....G...-TG..G..A.......... GTATTTACAAGACGGCAATAACATTCCCCGCGTTAGCGGGGTACCTTATTAGGTGGCTCGACGAAGTTGGCTCCTTAACCCTTGTGATCAGCGCTACGTCGCTGGTCGGCAAGG A [16296] 16423 28 100.0 33 ............................ CCTTTAAATTAATCGACACATCGCTAACAGACA 16484 28 100.0 33 ............................ CTAACTTGAGCGCCATTAGGTCACCTTCCATGT 16545 28 100.0 33 ............................ CTCCCCATGCCGGAGACAACGGGCTGGAAAGAG 16606 28 100.0 33 ............................ CGCTGCGCATTTCCCAACGGCGACGCCGCCAGC 16667 28 100.0 33 ............................ CGACGTGTTCCGTGATCATCAGGTTGGGATCAA 16728 28 100.0 33 ............................ CCGTGGTAGCCACTCCACCGGCACACTAGTGTG 16789 28 100.0 33 ............................ TGGTGCTAGTCGTATTGTGATTCATCGTTTACC 16850 28 100.0 33 ............................ CCAAGGTCCACGAGTGCGACCACGGGGGACTCT 16911 28 100.0 33 ............................ CCCACCCCGGCGACTTCGGATCCACAAGAATCT 16972 28 100.0 33 ............................ CGGGCGACATGCTCACTTTCAAGCAATTCACTG 17033 28 100.0 33 ............................ CCGGCTACCAGCCGTGGGATGACGTCGGAAAAG 17094 28 100.0 33 ............................ CTTTGTGCTTGCCGCTAACCCGATCGGTCTTAT 17155 28 100.0 33 ............................ CCGCGAAGGGGGCGAGCATGGCCGAGGTACAAC 17216 28 100.0 33 ............................ CACATGCTCATAATTCTGCGAGACACGATCGGT 17277 28 100.0 33 ............................ CTGGTCCCAGGTCGCAACGCCGTAGCCGGTGCG 17338 28 100.0 33 ............................ CCAACCCACCGGCGCGCGCATCATCCTGCGCCC 17399 28 100.0 33 ............................ CGTGTCCTGGGCAATATGGTCGCGGGGGTAATC 17460 28 100.0 33 ............................ CAAAACCCCCACCACCCGGTGGGGGTCAACAAA 17521 28 100.0 33 ............................ CTTGTCACCAGCCTCATCGCCGTCCGTGAACAC 17582 28 100.0 33 ............................ CAGGCGGTTGGGATCGGTGTATCCACGCCACTT 17643 28 100.0 33 ............................ CTGGGTTGCCTGAGCCATGCGGGCTCGTCCTCG 17704 28 100.0 33 ............................ CCGACGCCCTTATCAATAGACTTCGACGCGTCC 17765 28 100.0 33 ............................ GGGCTACGCCTACTCGACGGCGAAGCCTAAGGC 17826 28 100.0 33 ............................ CCGGATTAGACATAATTTGTCTCCTTCAACTTC 17887 28 100.0 33 ............................ CGCGTACTATGAGAACCGTTTTGGTAGCACGGA 17948 28 100.0 33 ............................ CGCGATCCTGCCGGGGTCGGCGTAGGTGATCGA 18009 28 100.0 33 ............................ CTGCCTGCGCAGGATCTCACTGTGCTTCGCAGC 18070 28 100.0 33 ............................ GTAGAGGAGAGTTTGCATGAAGGAAACGGATAA 18131 28 100.0 33 ............................ CAAGCCGACATGATCGGCATGTGGGCCGAGTAC 18192 28 100.0 34 ............................ GTCCCTGGACTGTGCCGAGCGATAGTCCGAGGTG 18254 28 100.0 33 ............................ CGGCCCCGGCAAGGACACCTTCTGGTGGATCGA 18315 28 100.0 33 ............................ CTGGTCACGCACACCGCCTACGCGGTCGTTGAG 18376 28 100.0 33 ............................ CTACCCGGACTGACCGCCGACTGATACGGGCGA 18437 28 100.0 33 ............................ CGGGATACTCGACCTGTGGTGCGCAGATGATGA 18498 28 100.0 33 ............................ CCCTTCAGTAGACAAACTCGTTGCTTCCGCTCG 18559 28 100.0 33 ............................ CAAGCACCAGCACTTCAACTTCCGTGGTATCGA 18620 28 100.0 33 ............................ TCGTGGCGCAAGCACGTCGACTACGTCGTGGCC 18681 28 100.0 33 ............................ CCGCAGAATTGTGATGTGGGTGCGCTCCCAAAC 18742 28 100.0 33 ............................ GTCGAAGACTGTCACGCAGGCCGCTCGCGAAGC 18803 28 100.0 33 ............................ CTCGCGAAAATCACATCCATGCGTGGAAAACGC 18864 28 100.0 33 ............................ CTTTCGCCGACATCTTGATCAGACGCTCCTGCG 18925 28 100.0 33 ............................ CTCACCACCGCCGATGTGTATCAGTGGTGGGAC 18986 28 100.0 33 ............................ CATCTGGCTGGACATCACTGACCAGGTACGCCC 19047 28 100.0 33 ............................ CGGTCTAACAGAAATTGCGGTGACGTTGGTTAC 19108 28 100.0 33 ............................ CACCACATCGCCGGATAGTTCCCGCGCTGCGGA 19169 28 100.0 33 ............................ CTCCCCGCACGGGCACTCACAGGGTGTAGCAGA 19230 28 100.0 33 ............................ CTCACGCTGCGGATCCTTGCCCTCCTTAGCAAA 19291 28 100.0 33 ............................ CTCACCTGCCGGTCGAAATACAAAGGTGAACCA 19352 28 100.0 33 ............................ CGTGTCCGGGGTGGACGCAGCCTGGTTGACGCT 19413 28 100.0 33 ............................ CGGGTCGTCTCCCATGTGCCCTGTCACGGCAAC 19474 28 100.0 33 ............................ CAACGCAGTGCAGGGGCAAAGGCAAGCCGAGAC 19535 28 100.0 33 ............................ CATGGTTACGCAACATTACGGGTAAATTACCTG 19596 28 100.0 33 ............................ GACCGACCAAGCATGGGCACACAAGGACTACCC 19657 28 100.0 33 ............................ CGCAGCAACCCGCGCAACTCGCCGACGAGGAAC 19718 28 100.0 33 ............................ CACGCAAGTATCACGCATAGCCAAAGGTCAAGC 19779 28 100.0 33 ............................ CAACGGGTTTTTCAAGATGCAGTACGCCATTTG 19840 28 100.0 33 ............................ CTCCTGGACGAGATGCTTGCTGAGTTGGGGCTG 19901 28 100.0 33 ............................ CAGCGGGTTCTCAGACGCCATATCGCCGATGAA 19962 28 100.0 33 ............................ CAGGCGGGTGTTCGCGCTGAGTGGCGGCTTGTC 20023 28 100.0 33 ............................ GGCGTTGTTGATTGCGGGTGTGTCCGCCAAGGT 20084 28 100.0 33 ............................ GTCTAAGGGTGTGACTGGTCGTGAGCTTCTCGA 20145 28 100.0 33 ............................ CCAGTACCAGCCACAGAGGACGAATCAATCGTG 20206 28 100.0 33 ............................ CCAGTACCAGCCACAGAGGACGAATCAATCGTG 20267 28 100.0 33 ............................ CTGTGAACGTGTCCCCGGCGATAATCACCTGCA 20328 28 100.0 33 ............................ CGCTCCGCCATGAGTTCCCCGTAGGTGGCGACC 20389 28 100.0 33 ............................ CAACGGGCGCATGTTGAAAACTATCCCCTTGTA 20450 28 100.0 33 ............................ CAGTTGTTGCTACTATCCTTGACATCAAAAGGT 20511 28 100.0 33 ............................ CGTGAGATGCGCCATTATCAAGGCGCGGCTGCC 20572 28 100.0 33 ............................ CGCTGCACCTTCATCGGTGCACGACCAATCGGG 20633 28 100.0 33 ............................ GTGGGGCTTGCGCAAACTTGCCCCGCGTATGCC 20694 28 100.0 33 ............................ CGGCCCCGCCATACGGTGTAGAGCGCCATGATG 20755 28 100.0 33 ............................ CGCGACGGAGATAAGACCAACCACACCCACAAC 20816 28 100.0 33 ............................ CGCTCACATTGGGCGATGGGTGACTAACCCGGA 20877 28 96.4 33 ...........T................ GGGTGGATGCCAGACCAGCCCGTAATCGATCAA 20938 28 100.0 33 ............................ CATTCATCCCCACCGGCCAGCGATTCGCAGCCA 20999 28 100.0 33 ............................ CTCATCATTCGAGCGCTGCAACTCCGCCAGATC 21060 28 100.0 33 ............................ CGGTGAAGCCTTGGCACGCTTGTACAAGGATAA 21121 28 100.0 33 ............................ CTTCCCGCCGGAAACTTAAATGTCGCCCGTGCG 21182 28 100.0 33 ............................ CGTCAGGCCGGCGTTTTGGCGGGTGAATCCCCA 21243 28 100.0 33 ............................ CGTGTGCGACAAGATGGACAAGCCCCGCGCCGT 21304 28 100.0 33 ............................ TGGTGTGGCGGTGCACCTTCTCGGCCTTGCGGT 21365 28 100.0 33 ............................ CGGGCTACAGACCGCCCTCGACGGCAAAGCCGT 21426 28 100.0 33 ............................ CGGGCTACAGACCGCCCTCGACGGCAAAGCCGT 21487 28 100.0 33 ............................ CTTCGAGAATCTGCTGAGGTTCGAGGAGTTTGG 21548 28 100.0 33 ............................ CCATCGACCTGGGGAAACGTTACCTAATGTCAC 21609 28 96.4 33 ..................A......... TTTGGCGACGGCGCTGGTTTTTGGCGGCTCGAT 21670 28 100.0 33 ............................ TATCCGAGTCGTCCTTCATCGTCGGGGTGGTCT 21731 28 100.0 33 ............................ CGACACGTCGAACTCCCAACCGTCGATGTTCTG 21792 28 100.0 33 ............................ GGTGTGCGTATCTGGGTACGCAGCGCCCGTGTA 21853 28 100.0 33 ............................ GCATGTCCTTTTGGTCCTGGACGATTGCGCTGC 21914 28 100.0 34 ............................ GTCAGCGCCGAAAGCACCATCGCAGTAGCAGCAA 21976 28 100.0 33 ............................ TGGTGTGGCGGTGCACCTTCTCGGCCTTGCGGT 22037 28 100.0 33 ............................ CGGGCTACAGACCGCCCTCGACGGCAAAGCCGT 22098 28 100.0 33 ............................ TGGTGTGGCGGTGCACCTTCTCGGCCTTGCGGT 22159 28 100.0 33 ............................ CGGGCTACAGACCGCCCTCGACGGCAAAGCCGT 22220 28 100.0 33 ............................ CTTCGAGAATCTGCTGAGGTTCGAGGAGTTTGG 22281 28 100.0 33 ............................ CTGCAACAGCAGGTGGTCGCCTTCCGTGAACGA 22342 28 100.0 33 ............................ CGGCCATTGCCCTTCTTCGTGTAAGGGAACTTG 22403 28 100.0 33 ............................ GTTCCTCCATGAGTTCGTTCAGGAATGTTCGGC 22464 28 100.0 33 ............................ CGCTGGGCATGTGGGCCTGTCGGTAGGTAGGCG 22525 28 100.0 33 ............................ CTTATCGACGCTTAGCAAACGCAATCGTGTGGC 22586 28 100.0 33 ............................ CGCTGGGCATGTGGGGCTGTCGGTAGGTAGGCG 22647 28 100.0 33 ............................ CTGGAGGAGGCAGATAAGAAGTTCAAAGAAGCA 22708 28 100.0 33 ............................ GCGCAGCCTGCTTACGGGCCACTTGCACACCCC 22769 28 100.0 33 ............................ CTCTGCGATCAAAACGCGCAGGCCAACGCCTCA 22830 28 100.0 33 ............................ CAGACGGAAGACGCGCACGGCAGGAGGGGTTTT 22891 28 100.0 33 ............................ CTACCCCACCGTCGCCGTTCCAGGTGATTTTTG 22952 28 100.0 33 ............................ CGAGGACGCAGGCCAGTACACCGCGCCGGAGAC 23013 28 100.0 33 ............................ CACTGGGTGCGTGGACACCAGTGATGGAAACCA 23074 28 100.0 33 ............................ GTGTGCTGTCGCGATTGGTTCTGGTGCGGTCGC 23135 28 100.0 33 ............................ CGCTACAGCGCGCTGTGCCCCGTCGTACATGCC 23196 28 100.0 34 ............................ CGCGGGCACCGCAGCAATCCTGCCGCTCCTGCTG 23258 28 100.0 33 ............................ CCACCTCGACGCCCACCTTTGGCCACACGCCAG 23319 28 96.4 33 ........T................... CCAGATCACCCGCGCTAACGGGGGTGGCACCGT 23380 28 100.0 33 ............................ CTCGACTTGCCCATCATCGGCGCCGAAGGAAAG 23441 28 100.0 33 ............................ CTCGCCGTCAAGCAGAAGATCATCTACGAGCAC 23502 28 100.0 33 ............................ CTCGCAGTCGATTGCGTACCGGCAGGGCGTTCT 23563 28 92.9 33 .............CT............. CGTGCCCGCCCGGTATTCGTAATCAATCACCTC 23624 28 100.0 34 ............................ CCGCAACGTGCTAGGCCATCTCCGGGACGATCCG 23686 28 100.0 33 ............................ CCCGCCACGGGCGAAGACGGCGGCGAAGTCGAG 23747 28 96.4 33 A........................... CTCGCCACTGGGGAGCACAAGGGCCTGGTCGCG 23808 28 92.9 30 .............CT............. GTAGTGGGCAAGACGAGTTAGCACAAGCCT 23866 28 78.6 0 .......T....GGT......TA..... | GT [23869] ========== ====== ====== ====== ============================ ================================================================================================================== ================== 124 28 99.4 34 GTCTGCCCCGCACTCGCGGGGATGAGCC # Left flank : GTGAAAGGAGGTGCCTGAACTCGGGTTTCATGTCGAGCTGACTCAGGAAAGTAAGGGTCGCCTTGCCGAGGTCGTGATTTCCAGCGAGCCAAATGTAGAGGCGTCGGACTTCCTCAACGGATAGGTTCAAGTTCTGTGCAAGATTCTCTTTGAGGGAATCCGACACCCAGGTGTCATAAACCGCAGCAGCGGTGCAGGCGGAGTCGATTAGATGCTGGGCCAAGCTGAGGTAGCCGGTTTCGTCGCCAGACTTCGCCCACAGCGACCGCGCTTGCGGGCTAAGCCCATCGACGAACGAATCAATCGATGCTTCGAAATGATCTTGGCGACGAGCCGTGTCTGCCATGTTTGTTACCTCCATGTTTGCCATGTCAACTCCAAGAGAATTGCTGTTAGTTCGAGAGCGTAGCAGAAGTTTGGGGGTTGTGTGTCCCGAATGCCCGCATGTAAATAGTTGGACAACAAAAAGTGGCCACCGGAATGGATGCACTAAGATTTGG # Right flank : CGGTGAGGCAGTTGTTGTTGGGGTGTGGCGTCGTCGAGAAGCAGCGCCCTGCAGAGAACTAACTCCCTGGTGCGCTCAACACCCCCAATGAGCGCAAACGACAAAACCGGAAGCAGCCTCCCCCGCTTCCGGTTTCGCACTCAGATCAGCTCAACCCAACCCACCCAGCCCGACGCAAACTACGACAGTTCCATCCAGATGGTCTTCAGGTTGGTGTACTGCTCCATCGCTTCGAAGCCGTTGTCCTTGCCACCGAAGCCGGAGTGCTTGTAGCCGCCGAACGGCGTGCGGATGTCCCCCTCACTGTAACCATTGACGGCGATGGTGCCGGCCTGGAATGCACGCGACATGCGCATGACCTGGCTGAGGTCCTTCGACCAGACGGTGCCGGCGAGACCGTACTTGGTGCCGTTGGCTAGGTGGATTGCCTCGTCTTCGTCGTCAAACTCGAGCACCACCGTGACTGGGCCGAAGATCTCTTCCTGCGCGACTGCAGAGGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGCCCCGCACTCGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTGCCCCGCGCGAGCGGGGATGAGCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-24] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //