Array 1 66062-67984 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYOQ01000012.1 Photobacterium angustum strain A10-3 CFSAN065431_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 66062 29 100.0 32 ............................. CCAGTTAAATATAGCGAATGATGAAACCATTA 66123 29 100.0 32 ............................. ATCACTCTAGGGATGAAATAGCATCCACAATT 66184 29 100.0 32 ............................. GTTTGATGGAAACGTACATTGATGACGACGAG 66245 29 100.0 32 ............................. GTTTAACGACGTATTTCACTGACGGCACTGTG 66306 29 100.0 32 ............................. TGACTGAGGCATTGCGCCGTAACACAACGTGT 66367 29 100.0 32 ............................. CGTACGCATTTGAACACGATGGTGTTAAGAAA 66428 29 100.0 32 ............................. GTAATAGCTATGAAGTTGTTGATATAAATAAA 66489 29 100.0 32 ............................. GACAAATTAATGTTTCGTGCTAAACGTTTTTG 66550 29 100.0 32 ............................. CGGATCCCGCGTTAAAATAACCATGTGGTCAC 66611 29 100.0 32 ............................. TATGCAGGGGTAGTATTCCATAGTGTAGCAAA 66672 29 100.0 32 ............................. CTACGATCAATTAACTCATCAATTGAGTAAAC 66733 29 100.0 32 ............................. GGTGAGTGATGAGTAAGAAGCAAGAACGTATT 66794 29 100.0 33 ............................. GAGGCTTTGAAATTACTTAACTAACTCTGATGC 66856 29 100.0 32 ............................. CCTGTAATGATGGCTTATGACACTAACGGTGA 66917 29 100.0 33 ............................. TATCAGTCTAATCTGTCAGATATGAGCTCTCAA 66979 29 100.0 32 ............................. TATCCGCTTTATATGGTGAGGACTTCGAGAAA 67040 29 100.0 32 ............................. ACAATATTGTAATTGATGGTGAGGGGGTTGTA 67101 29 100.0 32 ............................. GAAGCGACCAATCGCCACCTTTCTTGTATACA 67162 29 100.0 32 ............................. AATCTTGACACGGCGCAGACAACAGCAATGGA 67223 29 100.0 32 ............................. ACACCGTTTACAATCAGCTAGGCATTAAAGAT 67284 29 100.0 32 ............................. AATTGAACCTTTCTAAAGGTTGGTGGACATGG 67345 29 100.0 32 ............................. GCTGATGCTCGCAAGGCTGGCGTAGCACTTGA 67406 29 100.0 32 ............................. AGCTAAATATAGCGAAAAAACAGCCAGACAGA 67467 29 100.0 33 ............................. ACATCGGCACCTAACAGTTCACGCAGCTTTTGA 67529 29 100.0 32 ............................. GTTCGGGCTATTTACGCATTCGTGATATTGCC 67590 29 100.0 32 ............................. GTTAACAAGGCTAATTGTATTGGTGAGATCAT 67651 29 100.0 32 ............................. GGATTTTATACACTTCTATGATTCCGATTTAT 67712 29 82.8 32 ..........T.T.T........G....C TTACCAGGAATCAGCTTGATTGAGGCTTCAGT 67773 29 79.3 32 ..........TG..TA.......G....T ATGCAAATAAAACTTCTATCCAAATCGGCTGG 67834 29 86.2 32 A.........T.T...............T CATGACTCTATAAACAGGATAAAATTCATCAT 67895 29 75.9 32 ........T.TCTT.A.......G..... CAAAAAGCGTAACAAACAAAAGCGAGGCGGAG 67956 29 72.4 0 .C......TTT.T..A...........TA | ========== ====== ====== ====== ============================= ================================= ================== 32 29 96.8 32 GTGTTCCCCGCACCCTCGGGGATAAACCG # Left flank : CACTTATCGATGAAGTACTCAGTGCGGGAGATATTACAGCTCCTGAACCTTATATAGATGCGCAACCTCCTGCTATACCAGAGCCAATTACGATTGGTGATAGTGGCCATAGGAGCAAATAGTTTATGAGTATGCTTGTTGTGGTTACTGAAGTGGTACCGCCTCGATTACGAGGACGTCTTGCAGTTTGGTTATTAGAAGTTAGGGCTGGTGTATATATAGGGAACGTTTCTCGAAAAATCAGAGAAATGATCTGGGAACATATTGAATGCCTTGCTGAAGATGGCAATGTTGTAATGGCGTGGGGAACCAATACCGAATCAGGTTTTGACTTCCAAACTTATGGCAAAAACCGTCGAGAGCCCGTTGATTTAGGCGGGTTACGTTTAGTGAAATTTTTACCTGCAGACATGATTACTGAATGAAAAAATGTTCTTTAAAAAGTTGGTAGATCTTCAATGGTAGTAATTTACCTTTAAAATCAATATATTGTATTTAGA # Right flank : AACCAAATTTACCCATTCAATATCGGGGTTTTGATTAGATGTTTTAGGTTGAAGTCTTATAATTTTTTGTGTGTAAAAAGCACTCATAAAGTGTTGAACAAAATAAGAAGATAAATGGCTTTAAAGCTCAAATTTTATGAGAGCTTATACAAATTTAACATTCATAAATAACTTAATTTTGTTCTATTTCTTTTTTAATTCAATAGCGTGTTGGTTTAAGCCTTAAGTGTATTCTTTTACGTGAAAGTTAGAATACTTATTTGCAAGGTTGTTAAGTGCCCATTGAGCTGTAGGACTATGACGAATAAATATGAAATTATTTGAGACTATTTCTCTGAAATTCCCAGAGATAAACGATGTAAATTGCAAAATTCACTTGGCTGTATGGAACGGAAAAGATAACCCACTTGATATTTTCTTAGCTGGAAATTTTGAAGAATGGCAACGCTGGCAATCTAAGCGTAACTTCGAAAGAGAGTTCATTGTTTCACTGATTCAAC # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCTCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACCAGCGGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-30] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //